RNA–Protein interactions for RNA: ENST00000260595.9

CGREF1-201, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CGREF1, Length 1,177 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-201ENST00000260595 HDLBPQ00341 1268 aaKnown RBP21.12■□□□□ 0.97
CGREF1-201ENST00000260595 SREBF2Q12772 1141 aa21.12■□□□□ 0.97
CGREF1-201ENST00000260595 TEPSINQ96N21 525 aa21.12■□□□□ 0.97
CGREF1-201ENST00000260595 FRAT2O75474 233 aaPredicted RBP21.11■□□□□ 0.97
CGREF1-201ENST00000260595 TNFAIP1Q13829 316 aa21.11■□□□□ 0.97
CGREF1-201ENST00000260595 CDAN1Q8IWY9 1227 aa21.11■□□□□ 0.97
CGREF1-201ENST00000260595 LPIN2Q92539 896 aa21.11■□□□□ 0.97
CGREF1-201ENST00000260595 MRIQ9BWK5 157 aa21.11■□□□□ 0.97
CGREF1-201ENST00000260595 CFHR5Q9BXR6 569 aa21.11■□□□□ 0.97
CGREF1-201ENST00000260595 FBXO3Q9UK99 471 aa21.11■□□□□ 0.97
CGREF1-201ENST00000260595 ARAP2Q8WZ64 1704 aa21.11■□□□□ 0.97
CGREF1-201ENST00000260595 NOM1Q5C9Z4 860 aaKnown RBP21.1■□□□□ 0.97
CGREF1-201ENST00000260595 CTU1Q7Z7A3 348 aaKnown RBP21.1■□□□□ 0.97
CGREF1-201ENST00000260595 ARHGAP45Q92619 1136 aa21.1■□□□□ 0.97
CGREF1-201ENST00000260595 WNK4Q96J92 1243 aa21.1■□□□□ 0.97
CGREF1-201ENST00000260595 LRRFIP2Q9Y608 721 aaKnown RBP21.1■□□□□ 0.97
CGREF1-201ENST00000260595 TCP10L2B9ZVM9 353 aa21.09■□□□□ 0.97
CGREF1-201ENST00000260595 CIAO1O76071 339 aa21.09■□□□□ 0.97
CGREF1-201ENST00000260595 ZBTB48P10074 688 aaPredicted RBP21.09■□□□□ 0.97
CGREF1-201ENST00000260595 SLC5A1P13866 664 aa21.09■□□□□ 0.97
CGREF1-201ENST00000260595 ZNF296Q8WUU4 475 aaPredicted RBP21.09■□□□□ 0.97
CGREF1-201ENST00000260595 MEIS3Q99687 375 aa21.09■□□□□ 0.97
CGREF1-201ENST00000260595 R3HDMLQ9H3Y0 253 aa21.09■□□□□ 0.97
CGREF1-201ENST00000260595 SUGT1Q9Y2Z0 365 aa21.09■□□□□ 0.97
CGREF1-201ENST00000260595 MANSC4A6NHS7 340 aaPredicted RBP21.08■□□□□ 0.97
CGREF1-201ENST00000260595 GPR25O00155 361 aa21.08■□□□□ 0.97
CGREF1-201ENST00000260595 GJA5P36382 358 aa21.08■□□□□ 0.97
CGREF1-201ENST00000260595 IREB2P48200 963 aaKnown RBP21.08■□□□□ 0.97
CGREF1-201ENST00000260595 INTS3Q68E01 1043 aaKnown RBP21.08■□□□□ 0.97
CGREF1-201ENST00000260595 TEKT1Q969V4 418 aa21.08■□□□□ 0.97
CGREF1-201ENST00000260595 ZDHHC15Q96MV8 337 aa21.08■□□□□ 0.97
CGREF1-201ENST00000260595 TMEM39BQ9GZU3 492 aa21.08■□□□□ 0.97
CGREF1-201ENST00000260595 SIL1Q9H173 461 aa21.08■□□□□ 0.97
CGREF1-201ENST00000260595 INHBEP58166 350 aa21.07■□□□□ 0.96
CGREF1-201ENST00000260595 APOBEC3HQ6NTF7 200 aaKnown RBP21.07■□□□□ 0.96
CGREF1-201ENST00000260595 ANKRD13AQ8IZ07 590 aa21.07■□□□□ 0.96
CGREF1-201ENST00000260595 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.07■□□□□ 0.96
CGREF1-201ENST00000260595 HDAC5Q9UQL6 1122 aa21.07■□□□□ 0.96
CGREF1-201ENST00000260595 IFNL1Q8IU54 200 aa21.06■□□□□ 0.96
CGREF1-201ENST00000260595 COPRSQ9NQ92 184 aa21.06■□□□□ 0.96
CGREF1-201ENST00000260595 CEP126Q9P2H0 1117 aa21.06■□□□□ 0.96
CGREF1-201ENST00000260595 PA2G4Q9UQ80 394 aaKnown RBP21.06■□□□□ 0.96
CGREF1-201ENST00000260595 TNNI2P48788 182 aa21.05■□□□□ 0.96
CGREF1-201ENST00000260595 CACNB3P54284 484 aa21.05■□□□□ 0.96
CGREF1-201ENST00000260595 ATP2B3Q16720 1220 aa21.05■□□□□ 0.96
CGREF1-201ENST00000260595 HHIPL2Q6UWX4 724 aa21.05■□□□□ 0.96
CGREF1-201ENST00000260595 WDR66Q8TBY9 1149 aa21.05■□□□□ 0.96
CGREF1-201ENST00000260595 MAST3O60307 1309 aa21.04■□□□□ 0.96
CGREF1-201ENST00000260595 IGF2BP3O00425 579 aaKnown RBP eCLIP21.04■□□□□ 0.96
CGREF1-201ENST00000260595 ALDH1A1P00352 501 aa21.04■□□□□ 0.96
CGREF1-201ENST00000260595 IL15P40933 162 aaPredicted RBP21.04■□□□□ 0.96
CGREF1-201ENST00000260595 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.04■□□□□ 0.96
CGREF1-201ENST00000260595 TESPA1A2RU30 521 aaPredicted RBP21.02■□□□□ 0.96
CGREF1-201ENST00000260595 ZBTB22O15209 634 aa21.02■□□□□ 0.96
CGREF1-201ENST00000260595 BCAR3O75815 825 aa21.02■□□□□ 0.96
CGREF1-201ENST00000260595 TRIM27P14373 513 aa21.02■□□□□ 0.96
CGREF1-201ENST00000260595 MLLT1Q03111 559 aaPredicted RBP21.02■□□□□ 0.96
CGREF1-201ENST00000260595 MTX1Q13505 466 aa21.02■□□□□ 0.96
CGREF1-201ENST00000260595 PKN2Q16513 984 aaKnown RBP21.02■□□□□ 0.96
CGREF1-201ENST00000260595 FKBP1CQ5VVH2 108 aa21.02■□□□□ 0.96
CGREF1-201ENST00000260595 FAM83AQ86UY5 434 aa21.02■□□□□ 0.96
CGREF1-201ENST00000260595 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.02■□□□□ 0.96
CGREF1-201ENST00000260595 ELP3Q9H9T3 547 aa21.02■□□□□ 0.96
CGREF1-201ENST00000260595 TNNQ9UQP3 1299 aa21.02■□□□□ 0.96
CGREF1-201ENST00000260595 FKTNO75072 461 aa21.01■□□□□ 0.95
CGREF1-201ENST00000260595 GNAI3P08754 354 aa21.01■□□□□ 0.95
CGREF1-201ENST00000260595 PHKA1P46020 1223 aa21.01■□□□□ 0.95
CGREF1-201ENST00000260595 MAP3K9P80192 1104 aa21.01■□□□□ 0.95
CGREF1-201ENST00000260595 OPTNQ96CV9 577 aa21.01■□□□□ 0.95
CGREF1-201ENST00000260595 PTPN18Q99952 460 aa21.01■□□□□ 0.95
CGREF1-201ENST00000260595 LAMB1P07942 1786 aa21■□□□□ 0.95
CGREF1-201ENST00000260595 IPO8O15397 1037 aaKnown RBP21■□□□□ 0.95
CGREF1-201ENST00000260595 PRDX5P30044 214 aa21■□□□□ 0.95
CGREF1-201ENST00000260595 ADORA1P30542 326 aa21■□□□□ 0.95
CGREF1-201ENST00000260595 VGLL4Q14135 290 aa21■□□□□ 0.95
CGREF1-201ENST00000260595 ATF7IPQ6VMQ6 1270 aa21■□□□□ 0.95
CGREF1-201ENST00000260595 CNKSR2Q8WXI2 1034 aa21■□□□□ 0.95
CGREF1-201ENST00000260595 MS4A4AQ96JQ5 239 aa21■□□□□ 0.95
CGREF1-201ENST00000260595 TMOD2Q9NZR1 351 aa21■□□□□ 0.95
CGREF1-201ENST00000260595 HPS5Q9UPZ3 1129 aa21■□□□□ 0.95
CGREF1-201ENST00000260595 SALL1Q9NSC2 1324 aa21■□□□□ 0.95
CGREF1-201ENST00000260595 DIXDC1Q155Q3 683 aa20.99■□□□□ 0.95
CGREF1-201ENST00000260595 GNL3LQ9NVN8 582 aaKnown RBP20.99■□□□□ 0.95
CGREF1-201ENST00000260595 DAGLAQ9Y4D2 1042 aa20.99■□□□□ 0.95
CGREF1-201ENST00000260595 OTOFQ9HC10 1997 aa20.99■□□□□ 0.95
CGREF1-201ENST00000260595 SEMA3EO15041 775 aa20.98■□□□□ 0.95
CGREF1-201ENST00000260595 SRGAP3O43295 1099 aa20.98■□□□□ 0.95
CGREF1-201ENST00000260595 TIMM10P62072 90 aa20.98■□□□□ 0.95
CGREF1-201ENST00000260595 CCDC102BQ68D86 513 aa20.98■□□□□ 0.95
CGREF1-201ENST00000260595 DENND2AQ9ULE3 1009 aa20.98■□□□□ 0.95
CGREF1-201ENST00000260595 CDC42EP5Q6NZY7 148 aa20.97■□□□□ 0.95
CGREF1-201ENST00000260595 MIER1Q8N108 512 aa20.97■□□□□ 0.95
CGREF1-201ENST00000260595 FRAT1Q92837 279 aaPredicted RBP20.97■□□□□ 0.95
CGREF1-201ENST00000260595 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.97■□□□□ 0.95
CGREF1-201ENST00000260595 RPAP1Q9BWH6 1393 aaPredicted RBP20.97■□□□□ 0.95
CGREF1-201ENST00000260595 LDHBP07195 334 aaKnown RBP20.96■□□□□ 0.95
CGREF1-201ENST00000260595 SOX10P56693 466 aa20.96■□□□□ 0.95
CGREF1-201ENST00000260595 TFCP2Q12800 502 aa20.96■□□□□ 0.95
CGREF1-201ENST00000260595 CRHR2Q13324 411 aa20.96■□□□□ 0.95
CGREF1-201ENST00000260595 OTUD7BQ6GQQ9 843 aa20.96■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms