RNA–Protein interactions for RNA: ENST00000259605.10

RNF38-201, Transcript of ring finger protein 38, humanhuman

TSL 1 (best) BASIC

Gene RNF38, Length 5,012 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-201ENST00000259605 SERTAD1Q9UHV2 236 aa4.57□□□□□ -1.68
RNF38-201ENST00000259605 ZHX1Q9UKY1 873 aaPredicted RBP4.57□□□□□ -1.68
RNF38-201ENST00000259605 FARP1Q9Y4F1 1045 aaPredicted RBP4.57□□□□□ -1.68
RNF38-201ENST00000259605 ZNF644Q9H582 1327 aaPredicted RBP4.57□□□□□ -1.68
RNF38-201ENST00000259605 TNPO2O14787 897 aaKnown RBP4.57□□□□□ -1.68
RNF38-201ENST00000259605 PRPF40AO75400 957 aaKnown RBP4.57□□□□□ -1.68
RNF38-201ENST00000259605 ERLIN1O75477 346 aa4.57□□□□□ -1.68
RNF38-201ENST00000259605 BBOX1O75936 387 aa4.57□□□□□ -1.68
RNF38-201ENST00000259605 WTAPQ15007 396 aa4.57□□□□□ -1.68
RNF38-201ENST00000259605 SND1Q7KZF4 910 aaKnown RBP eCLIP4.57□□□□□ -1.68
RNF38-201ENST00000259605 MICALL1Q8N3F8 863 aa4.57□□□□□ -1.68
RNF38-201ENST00000259605 ZSCAN16Q9H4T2 348 aaPredicted RBP4.57□□□□□ -1.68
RNF38-201ENST00000259605 SLC12A6Q9UHW9 1150 aa4.57□□□□□ -1.68
RNF38-201ENST00000259605 SRPRBQ9Y5M8 271 aaKnown RBP4.57□□□□□ -1.68
RNF38-201ENST00000259605 SLC4A4Q9Y6R1 1079 aa4.57□□□□□ -1.68
RNF38-201ENST00000259605 NSD2O96028 1365 aa4.57□□□□□ -1.68
RNF38-201ENST00000259605 HECW1Q76N89 1606 aa4.57□□□□□ -1.68
RNF38-201ENST00000259605 ATP2A1O14983 1001 aa4.57□□□□□ -1.68
RNF38-201ENST00000259605 DAPK3O43293 454 aa4.57□□□□□ -1.68
RNF38-201ENST00000259605 ALDH1L1O75891 902 aa4.57□□□□□ -1.68
RNF38-201ENST00000259605 ZNF157P51786 506 aaPredicted RBP4.57□□□□□ -1.68
RNF38-201ENST00000259605 RNF219Q5W0B1 726 aaPredicted RBP4.57□□□□□ -1.68
RNF38-201ENST00000259605 SDE2Q6IQ49 451 aa4.57□□□□□ -1.68
RNF38-201ENST00000259605 KANK3Q6NY19 840 aa4.57□□□□□ -1.68
RNF38-201ENST00000259605 TTC30AQ86WT1 665 aa4.57□□□□□ -1.68
RNF38-201ENST00000259605 NCOA7Q8NI08 942 aa4.57□□□□□ -1.68
RNF38-201ENST00000259605 NACC1Q96RE7 527 aa4.57□□□□□ -1.68
RNF38-201ENST00000259605 IFT57Q9NWB7 429 aa4.57□□□□□ -1.68
RNF38-201ENST00000259605 AKAP7Q9P0M2 348 aaPredicted RBP4.57□□□□□ -1.68
RNF38-201ENST00000259605 CGNQ9P2M7 1197 aaKnown RBP4.57□□□□□ -1.68
RNF38-201ENST00000259605 FBXO40Q9UH90 709 aa4.57□□□□□ -1.68
RNF38-201ENST00000259605 GRIN2AQ12879 1464 aa4.57□□□□□ -1.68
RNF38-201ENST00000259605 DNMBPQ6XZF7 1577 aa4.57□□□□□ -1.68
RNF38-201ENST00000259605 ZWINTO95229 277 aa4.56□□□□□ -1.68
RNF38-201ENST00000259605 PARP1P09874 1014 aaKnown RBP4.56□□□□□ -1.68
RNF38-201ENST00000259605 MYCLP12524 364 aaPredicted RBP4.56□□□□□ -1.68
RNF38-201ENST00000259605 IARSP41252 1262 aaKnown RBP4.56□□□□□ -1.68
RNF38-201ENST00000259605 PRKCQQ04759 706 aa4.56□□□□□ -1.68
RNF38-201ENST00000259605 R3HDM1Q15032 1099 aaKnown RBP4.56□□□□□ -1.68
RNF38-201ENST00000259605 URGCPQ8TCY9 931 aa4.56□□□□□ -1.68
RNF38-201ENST00000259605 BBXQ8WY36 941 aaPredicted RBP4.56□□□□□ -1.68
RNF38-201ENST00000259605 CDHR1Q96JP9 859 aa4.56□□□□□ -1.68
RNF38-201ENST00000259605 IWS1Q96ST2 819 aa4.56□□□□□ -1.68
RNF38-201ENST00000259605 RMND1Q9NWS8 449 aa4.56□□□□□ -1.68
RNF38-201ENST00000259605 FAM169AQ9Y6X4 670 aa4.56□□□□□ -1.68
RNF38-201ENST00000259605 FGD6Q6ZV73 1430 aa4.56□□□□□ -1.68
RNF38-201ENST00000259605 GOLGA6CA6NDK9 693 aa4.56□□□□□ -1.68
RNF38-201ENST00000259605 GOLGA6BA6NDN3 693 aa4.56□□□□□ -1.68
RNF38-201ENST00000259605 GCOM1H8Y6P7 765 aaPredicted RBP4.56□□□□□ -1.68
RNF38-201ENST00000259605 PDE8AO60658 829 aa4.56□□□□□ -1.68
RNF38-201ENST00000259605 ZBTB7AO95365 584 aa4.56□□□□□ -1.68
RNF38-201ENST00000259605 MYZAPP0CAP1 466 aa4.56□□□□□ -1.68
RNF38-201ENST00000259605 GOLGA6DP0CG33 693 aa4.56□□□□□ -1.68
RNF38-201ENST00000259605 NPR1P16066 1061 aa4.56□□□□□ -1.68
RNF38-201ENST00000259605 RPL13P26373 211 aaKnown RBP4.56□□□□□ -1.68
RNF38-201ENST00000259605 RECQLP46063 649 aaPredicted RBP4.56□□□□□ -1.68
RNF38-201ENST00000259605 KRT85P78386 507 aa4.56□□□□□ -1.68
RNF38-201ENST00000259605 NFKBIBQ15653 356 aa4.56□□□□□ -1.68
RNF38-201ENST00000259605 ADALQ6DHV7 355 aa4.56□□□□□ -1.68
RNF38-201ENST00000259605 COPS6Q7L5N1 327 aa4.56□□□□□ -1.68
RNF38-201ENST00000259605 DPH6Q7L8W6 267 aa4.56□□□□□ -1.68
RNF38-201ENST00000259605 CHST3Q7LGC8 479 aa4.56□□□□□ -1.68
RNF38-201ENST00000259605 CPXCR1Q8N123 301 aa4.56□□□□□ -1.68
RNF38-201ENST00000259605 CCDC26Q8TAB7 109 aa4.56□□□□□ -1.68
RNF38-201ENST00000259605 PPP1R9BQ96SB3 815 aa4.56□□□□□ -1.68
RNF38-201ENST00000259605 INO80BQ9C086 356 aaPredicted RBP4.56□□□□□ -1.68
RNF38-201ENST00000259605 COPRSQ9NQ92 184 aa4.56□□□□□ -1.68
RNF38-201ENST00000259605 GOLGA6AQ9NYA3 693 aa4.56□□□□□ -1.68
RNF38-201ENST00000259605 MRPL11Q9Y3B7 192 aaKnown RBP4.56□□□□□ -1.68
RNF38-201ENST00000259605 PSDA5PKW4 1024 aaPredicted RBP4.56□□□□□ -1.68
RNF38-201ENST00000259605 USO1O60763 962 aaKnown RBP4.56□□□□□ -1.68
RNF38-201ENST00000259605 SLC1A4P43007 532 aa4.56□□□□□ -1.68
RNF38-201ENST00000259605 TAF1CQ15572 869 aaPredicted RBP4.56□□□□□ -1.68
RNF38-201ENST00000259605 HERC4Q5GLZ8 1057 aaPredicted RBP4.56□□□□□ -1.68
RNF38-201ENST00000259605 HAUS3Q68CZ6 603 aa4.56□□□□□ -1.68
RNF38-201ENST00000259605 DDX42Q86XP3 938 aaKnown RBP eCLIP4.56□□□□□ -1.68
RNF38-201ENST00000259605 SMC1BQ8NDV3 1235 aa4.56□□□□□ -1.68
RNF38-201ENST00000259605 PARD3BQ8TEW8 1205 aa4.56□□□□□ -1.68
RNF38-201ENST00000259605 TTC1Q99614 292 aa4.56□□□□□ -1.68
RNF38-201ENST00000259605 CCPG1Q9ULG6 757 aa4.56□□□□□ -1.68
RNF38-201ENST00000259605 GOLIM4O00461 696 aa4.56□□□□□ -1.68
RNF38-201ENST00000259605 GMNNO75496 209 aa4.56□□□□□ -1.68
RNF38-201ENST00000259605 EXOSC9Q06265 439 aaKnown RBP4.56□□□□□ -1.68
RNF38-201ENST00000259605 MCMDC2Q4G0Z9 681 aa4.56□□□□□ -1.68
RNF38-201ENST00000259605 RNF187Q5TA31 235 aaPredicted RBP4.56□□□□□ -1.68
RNF38-201ENST00000259605 ARMCX5Q6P1M9 558 aa4.56□□□□□ -1.68
RNF38-201ENST00000259605 PDZD4Q76G19 769 aaPredicted RBP4.56□□□□□ -1.68
RNF38-201ENST00000259605 KIAA1328Q86T90 577 aa4.56□□□□□ -1.68
RNF38-201ENST00000259605 HS6ST3Q8IZP7 471 aa4.56□□□□□ -1.68
RNF38-201ENST00000259605 PIAS4Q8N2W9 510 aaPredicted RBP4.56□□□□□ -1.68
RNF38-201ENST00000259605 GAS2L1Q99501 681 aaPredicted RBP4.56□□□□□ -1.68
RNF38-201ENST00000259605 LNPKQ9C0E8 428 aa4.56□□□□□ -1.68
RNF38-201ENST00000259605 ATP10AO60312 1499 aa4.56□□□□□ -1.68
RNF38-201ENST00000259605 ABCC10Q5T3U5 1492 aa4.56□□□□□ -1.68
RNF38-201ENST00000259605 CARNS1A5YM72 827 aa4.55□□□□□ -1.68
RNF38-201ENST00000259605 ABL1P00519 1130 aa4.55□□□□□ -1.68
RNF38-201ENST00000259605 ANXA13P27216 316 aa4.55□□□□□ -1.68
RNF38-201ENST00000259605 ATP6V1E1P36543 226 aa4.55□□□□□ -1.68
RNF38-201ENST00000259605 TAX1BP1Q86VP1 789 aa4.55□□□□□ -1.68
RNF38-201ENST00000259605 NME9Q86XW9 330 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms