RNA–Protein interactions for RNA: ENST00000259030.2

RTP4-201, Transcript of receptor transporter protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTP4, Length 1,554 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTP4-201ENST00000259030 FBXO33Q7Z6M2 555 aa13.44□□□□□ -0.26
RTP4-201ENST00000259030 TRMT2AQ8IZ69 625 aaKnown RBP13.44□□□□□ -0.26
RTP4-201ENST00000259030 ZNF296Q8WUU4 475 aaPredicted RBP13.44□□□□□ -0.26
RTP4-201ENST00000259030 ZNF70Q9UC06 446 aaPredicted RBP13.44□□□□□ -0.26
RTP4-201ENST00000259030 COL1A1P02452 1464 aaPredicted RBP13.44□□□□□ -0.26
RTP4-201ENST00000259030 MKI67P46013 3256 aaKnown RBP13.44□□□□□ -0.26
RTP4-201ENST00000259030 SOX10P56693 466 aa13.43□□□□□ -0.26
RTP4-201ENST00000259030 CAVIN4Q5BKX8 364 aa13.43□□□□□ -0.26
RTP4-201ENST00000259030 DZIP1LQ8IYY4 767 aaKnown RBP13.43□□□□□ -0.26
RTP4-201ENST00000259030 SLC10A4Q96EP9 437 aa13.43□□□□□ -0.26
RTP4-201ENST00000259030 TMEM39BQ9GZU3 492 aa13.43□□□□□ -0.26
RTP4-201ENST00000259030 OTOFQ9HC10 1997 aa13.43□□□□□ -0.26
RTP4-201ENST00000259030 TM4SF4P48230 202 aa13.42□□□□□ -0.26
RTP4-201ENST00000259030 SPDYE2Q495Y8 402 aa13.42□□□□□ -0.26
RTP4-201ENST00000259030 SERPINA10Q9UK55 444 aa13.42□□□□□ -0.26
RTP4-201ENST00000259030 PA2G4Q9UQ80 394 aaKnown RBP13.42□□□□□ -0.26
RTP4-201ENST00000259030 PPP1R12BO60237 982 aaPredicted RBP13.41□□□□□ -0.26
RTP4-201ENST00000259030 USP2O75604 605 aaPredicted RBP13.41□□□□□ -0.26
RTP4-201ENST00000259030 UBTFL1P0CB47 393 aaPredicted RBP13.41□□□□□ -0.26
RTP4-201ENST00000259030 GJA5P36382 358 aa13.41□□□□□ -0.26
RTP4-201ENST00000259030 PUM3Q15397 648 aaKnown RBP13.41□□□□□ -0.26
RTP4-201ENST00000259030 ATG9AQ7Z3C6 839 aa13.41□□□□□ -0.26
RTP4-201ENST00000259030 WNK4Q96J92 1243 aa13.41□□□□□ -0.26
RTP4-201ENST00000259030 TNNQ9UQP3 1299 aa13.41□□□□□ -0.26
RTP4-201ENST00000259030 PPP2R3BQ9Y5P8 575 aa13.41□□□□□ -0.26
RTP4-201ENST00000259030 LRRFIP2Q9Y608 721 aaKnown RBP13.41□□□□□ -0.26
RTP4-201ENST00000259030 EYA2O00167 538 aa13.41□□□□□ -0.26
RTP4-201ENST00000259030 FGFR2P21802 821 aa13.41□□□□□ -0.26
RTP4-201ENST00000259030 SREBF2Q12772 1141 aa13.41□□□□□ -0.26
RTP4-201ENST00000259030 SUPT20HL1Q3ZLR7 823 aa13.41□□□□□ -0.26
RTP4-201ENST00000259030 CTU1Q7Z7A3 348 aaKnown RBP13.41□□□□□ -0.26
RTP4-201ENST00000259030 REM2Q8IYK8 340 aaPredicted RBP13.41□□□□□ -0.26
RTP4-201ENST00000259030 MEIS3Q99687 375 aa13.41□□□□□ -0.26
RTP4-201ENST00000259030 ELP3Q9H9T3 547 aa13.41□□□□□ -0.26
RTP4-201ENST00000259030 MYH13Q9UKX3 1938 aa13.4□□□□□ -0.26
RTP4-201ENST00000259030 GPR25O00155 361 aa13.4□□□□□ -0.26
RTP4-201ENST00000259030 IGF2BP3O00425 579 aaKnown RBP eCLIP13.4□□□□□ -0.26
RTP4-201ENST00000259030 IFIT1P09914 478 aaKnown RBP13.4□□□□□ -0.26
RTP4-201ENST00000259030 MAP3K11Q16584 847 aa13.4□□□□□ -0.26
RTP4-201ENST00000259030 TEPSINQ96N21 525 aa13.4□□□□□ -0.26
RTP4-201ENST00000259030 RARSP54136 660 aaKnown RBP13.39□□□□□ -0.27
RTP4-201ENST00000259030 MLLT1Q03111 559 aaPredicted RBP13.39□□□□□ -0.27
RTP4-201ENST00000259030 CCER2I3L3R5 266 aa13.38□□□□□ -0.27
RTP4-201ENST00000259030 SLC5A1P13866 664 aa13.38□□□□□ -0.27
RTP4-201ENST00000259030 IREB2P48200 963 aaKnown RBP13.38□□□□□ -0.27
RTP4-201ENST00000259030 TNFAIP1Q13829 316 aa13.38□□□□□ -0.27
RTP4-201ENST00000259030 IFNL1Q8IU54 200 aa13.38□□□□□ -0.27
RTP4-201ENST00000259030 TEKT1Q969V4 418 aa13.38□□□□□ -0.27
RTP4-201ENST00000259030 OPTNQ96CV9 577 aa13.38□□□□□ -0.27
RTP4-201ENST00000259030 ADORA1P30542 326 aa13.37□□□□□ -0.27
RTP4-201ENST00000259030 DIXDC1Q155Q3 683 aa13.37□□□□□ -0.27
RTP4-201ENST00000259030 ATP2B3Q16720 1220 aa13.37□□□□□ -0.27
RTP4-201ENST00000259030 TBC1D22AQ8WUA7 517 aa13.37□□□□□ -0.27
RTP4-201ENST00000259030 LPIN2Q92539 896 aa13.37□□□□□ -0.27
RTP4-201ENST00000259030 PTPN18Q99952 460 aa13.37□□□□□ -0.27
RTP4-201ENST00000259030 API5Q9BZZ5 524 aaKnown RBP13.37□□□□□ -0.27
RTP4-201ENST00000259030 HPS5Q9UPZ3 1129 aa13.37□□□□□ -0.27
RTP4-201ENST00000259030 MANSC4A6NHS7 340 aaPredicted RBP13.37□□□□□ -0.27
RTP4-201ENST00000259030 BCAR3O75815 825 aa13.37□□□□□ -0.27
RTP4-201ENST00000259030 PRDX5P30044 214 aa13.37□□□□□ -0.27
RTP4-201ENST00000259030 PHKA1P46020 1223 aa13.37□□□□□ -0.27
RTP4-201ENST00000259030 RGS19P49795 217 aa13.37□□□□□ -0.27
RTP4-201ENST00000259030 VGLL4Q14135 290 aa13.37□□□□□ -0.27
RTP4-201ENST00000259030 APOBEC3HQ6NTF7 200 aaKnown RBP13.37□□□□□ -0.27
RTP4-201ENST00000259030 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.37□□□□□ -0.27
RTP4-201ENST00000259030 ANKRD13AQ8IZ07 590 aa13.37□□□□□ -0.27
RTP4-201ENST00000259030 FRAT1Q92837 279 aaPredicted RBP13.37□□□□□ -0.27
RTP4-201ENST00000259030 ZBTB48P10074 688 aaPredicted RBP13.36□□□□□ -0.27
RTP4-201ENST00000259030 CLUAP1Q96AJ1 413 aa13.36□□□□□ -0.27
RTP4-201ENST00000259030 ZDHHC15Q96MV8 337 aa13.36□□□□□ -0.27
RTP4-201ENST00000259030 CEP126Q9P2H0 1117 aa13.36□□□□□ -0.27
RTP4-201ENST00000259030 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.36□□□□□ -0.27
RTP4-201ENST00000259030 FKTNO75072 461 aa13.35□□□□□ -0.27
RTP4-201ENST00000259030 CT47B1P0C2W7 299 aaPredicted RBP13.35□□□□□ -0.27
RTP4-201ENST00000259030 TNNI2P48788 182 aa13.35□□□□□ -0.27
RTP4-201ENST00000259030 TCP10Q12799 353 aa13.35□□□□□ -0.27
RTP4-201ENST00000259030 CRHR2Q13324 411 aa13.35□□□□□ -0.27
RTP4-201ENST00000259030 ZKSCAN4Q969J2 545 aaPredicted RBP13.35□□□□□ -0.27
RTP4-201ENST00000259030 OTUD5Q96G74 571 aa13.35□□□□□ -0.27
RTP4-201ENST00000259030 KIF16BQ96L93 1317 aa13.34□□□□□ -0.27
RTP4-201ENST00000259030 TIMM10P62072 90 aa13.34□□□□□ -0.27
RTP4-201ENST00000259030 CAP1Q01518 475 aa13.34□□□□□ -0.27
RTP4-201ENST00000259030 MIGA2Q7L4E1 593 aa13.34□□□□□ -0.27
RTP4-201ENST00000259030 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.34□□□□□ -0.27
RTP4-201ENST00000259030 DAGLAQ9Y4D2 1042 aa13.34□□□□□ -0.27
RTP4-201ENST00000259030 LAMB1P07942 1786 aa13.34□□□□□ -0.27
RTP4-201ENST00000259030 SRGAP3O43295 1099 aa13.33□□□□□ -0.28
RTP4-201ENST00000259030 CIAO1O76071 339 aa13.33□□□□□ -0.28
RTP4-201ENST00000259030 ECM2O94769 699 aaPredicted RBP13.33□□□□□ -0.28
RTP4-201ENST00000259030 TRIM27P14373 513 aa13.33□□□□□ -0.28
RTP4-201ENST00000259030 MAP3K9P80192 1104 aa13.33□□□□□ -0.28
RTP4-201ENST00000259030 HDLBPQ00341 1268 aaKnown RBP13.33□□□□□ -0.28
RTP4-201ENST00000259030 NFIAQ12857 509 aa13.33□□□□□ -0.28
RTP4-201ENST00000259030 MIER1Q8N108 512 aa13.33□□□□□ -0.28
RTP4-201ENST00000259030 CD99L2Q8TCZ2 262 aa13.33□□□□□ -0.28
RTP4-201ENST00000259030 WRNIP1Q96S55 665 aa13.33□□□□□ -0.28
RTP4-201ENST00000259030 TMOD2Q9NZR1 351 aa13.33□□□□□ -0.28
RTP4-201ENST00000259030 TRIM17Q9Y577 477 aa13.33□□□□□ -0.28
RTP4-201ENST00000259030 ALDH1A1P00352 501 aa13.32□□□□□ -0.28
RTP4-201ENST00000259030 IL15P40933 162 aaPredicted RBP13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms