RNA–Protein interactions for RNA: ENST00000258909.13

TM6SF1-201, Transcript of transmembrane 6 superfamily member 1, humanhuman

TSL 1 (best)

Gene TM6SF1, Length 1,469 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM6SF1-201ENST00000258909 CDAN1Q8IWY9 1227 aa23.76■■□□□ 1.39
TM6SF1-201ENST00000258909 TCP10L2B9ZVM9 353 aa23.75■■□□□ 1.39
TM6SF1-201ENST00000258909 TBC1D22AQ8WUA7 517 aa23.75■■□□□ 1.39
TM6SF1-201ENST00000258909 USP2O75604 605 aaPredicted RBP23.75■■□□□ 1.39
TM6SF1-201ENST00000258909 SREBF2Q12772 1141 aa23.75■■□□□ 1.39
TM6SF1-201ENST00000258909 MEIS3Q99687 375 aa23.75■■□□□ 1.39
TM6SF1-201ENST00000258909 SLC5A1P13866 664 aa23.74■■□□□ 1.39
TM6SF1-201ENST00000258909 TNFAIP1Q13829 316 aa23.74■■□□□ 1.39
TM6SF1-201ENST00000258909 LPIN2Q92539 896 aa23.74■■□□□ 1.39
TM6SF1-201ENST00000258909 PA2G4Q9UQ80 394 aaKnown RBP23.74■■□□□ 1.39
TM6SF1-201ENST00000258909 MYH13Q9UKX3 1938 aa23.73■■□□□ 1.39
TM6SF1-201ENST00000258909 CACNB3P54284 484 aa23.73■■□□□ 1.39
TM6SF1-201ENST00000258909 ZNF296Q8WUU4 475 aaPredicted RBP23.73■■□□□ 1.39
TM6SF1-201ENST00000258909 WNK4Q96J92 1243 aa23.73■■□□□ 1.39
TM6SF1-201ENST00000258909 TMEM39BQ9GZU3 492 aa23.73■■□□□ 1.39
TM6SF1-201ENST00000258909 KIF16BQ96L93 1317 aa23.72■■□□□ 1.39
TM6SF1-201ENST00000258909 IREB2P48200 963 aaKnown RBP23.72■■□□□ 1.39
TM6SF1-201ENST00000258909 TEKT1Q969V4 418 aa23.72■■□□□ 1.39
TM6SF1-201ENST00000258909 TEPSINQ96N21 525 aa23.72■■□□□ 1.39
TM6SF1-201ENST00000258909 R3HDMLQ9H3Y0 253 aa23.72■■□□□ 1.39
TM6SF1-201ENST00000258909 CTU1Q7Z7A3 348 aaKnown RBP23.71■■□□□ 1.39
TM6SF1-201ENST00000258909 HDLBPQ00341 1268 aaKnown RBP23.7■■□□□ 1.38
TM6SF1-201ENST00000258909 ATP2B3Q16720 1220 aa23.7■■□□□ 1.38
TM6SF1-201ENST00000258909 CEP126Q9P2H0 1117 aa23.7■■□□□ 1.38
TM6SF1-201ENST00000258909 TNNQ9UQP3 1299 aa23.7■■□□□ 1.38
TM6SF1-201ENST00000258909 OTOFQ9HC10 1997 aa23.7■■□□□ 1.38
TM6SF1-201ENST00000258909 GPR25O00155 361 aa23.69■■□□□ 1.38
TM6SF1-201ENST00000258909 CIAO1O76071 339 aa23.69■■□□□ 1.38
TM6SF1-201ENST00000258909 MANSC4A6NHS7 340 aaPredicted RBP23.68■■□□□ 1.38
TM6SF1-201ENST00000258909 ZBTB48P10074 688 aaPredicted RBP23.68■■□□□ 1.38
TM6SF1-201ENST00000258909 GJA5P36382 358 aa23.68■■□□□ 1.38
TM6SF1-201ENST00000258909 TNNI2P48788 182 aa23.68■■□□□ 1.38
TM6SF1-201ENST00000258909 INTS3Q68E01 1043 aaKnown RBP23.68■■□□□ 1.38
TM6SF1-201ENST00000258909 ANKRD13AQ8IZ07 590 aa23.68■■□□□ 1.38
TM6SF1-201ENST00000258909 ARHGAP45Q92619 1136 aa23.68■■□□□ 1.38
TM6SF1-201ENST00000258909 ZDHHC15Q96MV8 337 aa23.68■■□□□ 1.38
TM6SF1-201ENST00000258909 ELP3Q9H9T3 547 aa23.68■■□□□ 1.38
TM6SF1-201ENST00000258909 FBXO3Q9UK99 471 aa23.68■■□□□ 1.38
TM6SF1-201ENST00000258909 BCAR3O75815 825 aa23.68■■□□□ 1.38
TM6SF1-201ENST00000258909 APOBEC3HQ6NTF7 200 aaKnown RBP23.68■■□□□ 1.38
TM6SF1-201ENST00000258909 FRAT1Q92837 279 aaPredicted RBP23.68■■□□□ 1.38
TM6SF1-201ENST00000258909 HDAC5Q9UQL6 1122 aa23.68■■□□□ 1.38
TM6SF1-201ENST00000258909 IL15P40933 162 aaPredicted RBP23.67■■□□□ 1.38
TM6SF1-201ENST00000258909 IFNL1Q8IU54 200 aa23.67■■□□□ 1.38
TM6SF1-201ENST00000258909 WDR66Q8TBY9 1149 aa23.67■■□□□ 1.38
TM6SF1-201ENST00000258909 UNCXA6NJT0 531 aa23.66■■□□□ 1.38
TM6SF1-201ENST00000258909 IGF2BP3O00425 579 aaKnown RBP eCLIP23.66■■□□□ 1.38
TM6SF1-201ENST00000258909 MIER1Q8N108 512 aa23.66■■□□□ 1.38
TM6SF1-201ENST00000258909 MRIQ9BWK5 157 aa23.66■■□□□ 1.38
TM6SF1-201ENST00000258909 COPRSQ9NQ92 184 aa23.66■■□□□ 1.38
TM6SF1-201ENST00000258909 SUGT1Q9Y2Z0 365 aa23.66■■□□□ 1.38
TM6SF1-201ENST00000258909 MAST3O60307 1309 aa23.66■■□□□ 1.38
TM6SF1-201ENST00000258909 TRIM27P14373 513 aa23.65■■□□□ 1.38
TM6SF1-201ENST00000258909 ADORA1P30542 326 aa23.65■■□□□ 1.38
TM6SF1-201ENST00000258909 PHKA1P46020 1223 aa23.65■■□□□ 1.38
TM6SF1-201ENST00000258909 RGS19P49795 217 aa23.65■■□□□ 1.38
TM6SF1-201ENST00000258909 INHBEP58166 350 aa23.65■■□□□ 1.38
TM6SF1-201ENST00000258909 PPP1R3FQ6ZSY5 799 aaPredicted RBP23.65■■□□□ 1.38
TM6SF1-201ENST00000258909 CNKSR2Q8WXI2 1034 aa23.65■■□□□ 1.38
TM6SF1-201ENST00000258909 CLUAP1Q96AJ1 413 aa23.65■■□□□ 1.38
TM6SF1-201ENST00000258909 TMOD2Q9NZR1 351 aa23.65■■□□□ 1.38
TM6SF1-201ENST00000258909 MLLT1Q03111 559 aaPredicted RBP23.64■■□□□ 1.38
TM6SF1-201ENST00000258909 DIXDC1Q155Q3 683 aa23.64■■□□□ 1.38
TM6SF1-201ENST00000258909 HHIPL2Q6UWX4 724 aa23.64■■□□□ 1.38
TM6SF1-201ENST00000258909 OPTNQ96CV9 577 aa23.64■■□□□ 1.38
TM6SF1-201ENST00000258909 SRGAP3O43295 1099 aa23.63■■□□□ 1.37
TM6SF1-201ENST00000258909 ALDH1A1P00352 501 aa23.63■■□□□ 1.37
TM6SF1-201ENST00000258909 GNAI3P08754 354 aa23.63■■□□□ 1.37
TM6SF1-201ENST00000258909 PRDX5P30044 214 aa23.63■■□□□ 1.37
TM6SF1-201ENST00000258909 CFHR5Q9BXR6 569 aa23.63■■□□□ 1.37
TM6SF1-201ENST00000258909 GNL3LQ9NVN8 582 aaKnown RBP23.63■■□□□ 1.37
TM6SF1-201ENST00000258909 LAMB1P07942 1786 aa23.63■■□□□ 1.37
TM6SF1-201ENST00000258909 IPO8O15397 1037 aaKnown RBP23.62■■□□□ 1.37
TM6SF1-201ENST00000258909 FKTNO75072 461 aa23.62■■□□□ 1.37
TM6SF1-201ENST00000258909 SOX10P56693 466 aa23.62■■□□□ 1.37
TM6SF1-201ENST00000258909 TIMM10P62072 90 aa23.62■■□□□ 1.37
TM6SF1-201ENST00000258909 MAP3K9P80192 1104 aa23.62■■□□□ 1.37
TM6SF1-201ENST00000258909 VGLL4Q14135 290 aa23.62■■□□□ 1.37
TM6SF1-201ENST00000258909 ATF7IPQ6VMQ6 1270 aa23.62■■□□□ 1.37
TM6SF1-201ENST00000258909 HNRNPUQ00839 825 aaKnown RBP eCLIP23.62■■□□□ 1.37
TM6SF1-201ENST00000258909 NOM1Q5C9Z4 860 aaKnown RBP23.62■■□□□ 1.37
TM6SF1-201ENST00000258909 DDX55Q8NHQ9 600 aaKnown RBP eCLIP23.62■■□□□ 1.37
TM6SF1-201ENST00000258909 PTPN18Q99952 460 aa23.62■■□□□ 1.37
TM6SF1-201ENST00000258909 HPS5Q9UPZ3 1129 aa23.62■■□□□ 1.37
TM6SF1-201ENST00000258909 DAGLAQ9Y4D2 1042 aa23.62■■□□□ 1.37
TM6SF1-201ENST00000258909 CCDC102BQ68D86 513 aa23.61■■□□□ 1.37
TM6SF1-201ENST00000258909 FAM83AQ86UY5 434 aa23.61■■□□□ 1.37
TM6SF1-201ENST00000258909 LDHBP07195 334 aaKnown RBP23.6■■□□□ 1.37
TM6SF1-201ENST00000258909 TFCP2Q12800 502 aa23.6■■□□□ 1.37
TM6SF1-201ENST00000258909 DENND2AQ9ULE3 1009 aa23.6■■□□□ 1.37
TM6SF1-201ENST00000258909 CSADQ9Y600 493 aa23.6■■□□□ 1.37
TM6SF1-201ENST00000258909 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.6■■□□□ 1.37
TM6SF1-201ENST00000258909 FKBP1CQ5VVH2 108 aa23.59■■□□□ 1.37
TM6SF1-201ENST00000258909 CDC42EP5Q6NZY7 148 aa23.59■■□□□ 1.37
TM6SF1-201ENST00000258909 OTUD5Q96G74 571 aa23.59■■□□□ 1.37
TM6SF1-201ENST00000258909 AK9Q5TCS8 1911 aa23.58■■□□□ 1.37
TM6SF1-201ENST00000258909 TCP10Q12799 353 aa23.58■■□□□ 1.37
TM6SF1-201ENST00000258909 CRHR2Q13324 411 aa23.58■■□□□ 1.37
TM6SF1-201ENST00000258909 MTX1Q13505 466 aa23.58■■□□□ 1.37
TM6SF1-201ENST00000258909 PKN2Q16513 984 aaKnown RBP23.58■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms