RNA–Protein interactions for RNA: ENST00000258613.4

THSD1-201, Transcript of thrombospondin type 1 domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THSD1, Length 2,962 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THSD1-201ENST00000258613 EPB41L4AQ9HCS5 686 aaPredicted RBP15.43■□□□□ 0.06
THSD1-201ENST00000258613 NR1I2O75469 434 aa15.42■□□□□ 0.06
THSD1-201ENST00000258613 POLR3DP05423 398 aaPredicted RBP15.42■□□□□ 0.06
THSD1-201ENST00000258613 BARGINQ6ZT62 677 aa15.42■□□□□ 0.06
THSD1-201ENST00000258613 ERCC4Q92889 916 aaPredicted RBP15.42■□□□□ 0.06
THSD1-201ENST00000258613 STRBPQ96SI9 672 aaKnown RBP15.42■□□□□ 0.06
THSD1-201ENST00000258613 CTNNA3Q9UI47 895 aa15.42■□□□□ 0.06
THSD1-201ENST00000258613 NEDD4P46934 1319 aa15.42■□□□□ 0.06
THSD1-201ENST00000258613 MROH5Q6ZUA9 1318 aa15.42■□□□□ 0.06
THSD1-201ENST00000258613 GOLGA6L4A6NEF3 574 aa15.42■□□□□ 0.06
THSD1-201ENST00000258613 PHF14O94880 888 aa15.42■□□□□ 0.06
THSD1-201ENST00000258613 ADD1P35611 737 aaKnown RBP15.42■□□□□ 0.06
THSD1-201ENST00000258613 RRP12Q5JTH9 1297 aaKnown RBP15.42■□□□□ 0.06
THSD1-201ENST00000258613 NCOA7Q8NI08 942 aa15.42■□□□□ 0.06
THSD1-201ENST00000258613 ZNF830Q96NB3 372 aaPredicted RBP15.42■□□□□ 0.06
THSD1-201ENST00000258613 BCL2L12Q9HB09 334 aa15.42■□□□□ 0.06
THSD1-201ENST00000258613 RRP9O43818 475 aaKnown RBP15.42■□□□□ 0.06
THSD1-201ENST00000258613 MCM5P33992 734 aa15.42■□□□□ 0.06
THSD1-201ENST00000258613 ILDR1Q86SU0 546 aaPredicted RBP15.42■□□□□ 0.06
THSD1-201ENST00000258613 LCORLQ8N3X6 602 aa15.42■□□□□ 0.06
THSD1-201ENST00000258613 USP28Q96RU2 1077 aa15.42■□□□□ 0.06
THSD1-201ENST00000258613 LRRFIP1Q32MZ4 808 aaKnown RBP15.41■□□□□ 0.06
THSD1-201ENST00000258613 BICD2Q8TD16 824 aa15.41■□□□□ 0.06
THSD1-201ENST00000258613 TOMM22Q9NS69 142 aa15.41■□□□□ 0.06
THSD1-201ENST00000258613 GNPATO15228 680 aa15.41■□□□□ 0.06
THSD1-201ENST00000258613 LRP2BPQ9P2M1 347 aa15.41■□□□□ 0.06
THSD1-201ENST00000258613 AP5Z1O43299 807 aa15.4■□□□□ 0.06
THSD1-201ENST00000258613 MICU3Q86XE3 530 aa15.4■□□□□ 0.06
THSD1-201ENST00000258613 SDR42E1Q8WUS8 393 aa15.4■□□□□ 0.06
THSD1-201ENST00000258613 PHKBQ93100 1093 aa15.4■□□□□ 0.06
THSD1-201ENST00000258613 PDLIM2Q96JY6 352 aa15.4■□□□□ 0.06
THSD1-201ENST00000258613 BCL9LQ86UU0 1499 aa15.4■□□□□ 0.06
THSD1-201ENST00000258613 EVX2Q03828 476 aa15.4■□□□□ 0.06
THSD1-201ENST00000258613 UBE3CQ15386 1083 aa15.4■□□□□ 0.06
THSD1-201ENST00000258613 PARP10Q53GL7 1025 aa15.4■□□□□ 0.06
THSD1-201ENST00000258613 CCDC82Q8N4S0 544 aa15.4■□□□□ 0.06
THSD1-201ENST00000258613 CARMIL3Q8ND23 1372 aa15.4■□□□□ 0.06
THSD1-201ENST00000258613 TTF1Q15361 905 aaPredicted RBP15.39■□□□□ 0.05
THSD1-201ENST00000258613 CMTR1Q8N1G2 835 aaKnown RBP15.39■□□□□ 0.05
THSD1-201ENST00000258613 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.39■□□□□ 0.05
THSD1-201ENST00000258613 DDX60Q8IY21 1712 aaKnown RBP15.39■□□□□ 0.05
THSD1-201ENST00000258613 ABCC12Q96J65 1359 aa15.39■□□□□ 0.05
THSD1-201ENST00000258613 SALL1Q9NSC2 1324 aa15.39■□□□□ 0.05
THSD1-201ENST00000258613 UQCRFS1P1P0C7P4 283 aa15.39■□□□□ 0.05
THSD1-201ENST00000258613 IFNL3Q8IZI9 196 aa15.39■□□□□ 0.05
THSD1-201ENST00000258613 FBXW7Q969H0 707 aa15.39■□□□□ 0.05
THSD1-201ENST00000258613 ZNF274Q96GC6 653 aaPredicted RBP15.39■□□□□ 0.05
THSD1-201ENST00000258613 CLCN1P35523 988 aa15.39■□□□□ 0.05
THSD1-201ENST00000258613 SLC4A8Q2Y0W8 1093 aa15.39■□□□□ 0.05
THSD1-201ENST00000258613 FUCA2Q9BTY2 467 aa15.39■□□□□ 0.05
THSD1-201ENST00000258613 TFCP2L1Q9NZI6 479 aa15.39■□□□□ 0.05
THSD1-201ENST00000258613 USP21Q9UK80 565 aa15.39■□□□□ 0.05
THSD1-201ENST00000258613 BAZ2BQ9UIF8 2168 aaKnown RBP15.39■□□□□ 0.05
THSD1-201ENST00000258613 CYP2D7A0A087X1C5 515 aa15.38■□□□□ 0.05
THSD1-201ENST00000258613 CDC27P30260 824 aa15.38■□□□□ 0.05
THSD1-201ENST00000258613 MAP3K12Q12852 859 aa15.38■□□□□ 0.05
THSD1-201ENST00000258613 ZNF512BQ96KM6 892 aaPredicted RBP15.38■□□□□ 0.05
THSD1-201ENST00000258613 SCAND2PQ9GZW5 306 aaPredicted RBP15.38■□□□□ 0.05
THSD1-201ENST00000258613 ORC3Q9UBD5 711 aaPredicted RBP15.38■□□□□ 0.05
THSD1-201ENST00000258613 GSG1L2A8MUP6 293 aa15.38■□□□□ 0.05
THSD1-201ENST00000258613 CPLX1O14810 134 aa15.38■□□□□ 0.05
THSD1-201ENST00000258613 TRDNQ13061 729 aa15.38■□□□□ 0.05
THSD1-201ENST00000258613 ZSCAN25Q6NSZ9 544 aa15.38■□□□□ 0.05
THSD1-201ENST00000258613 SMARCC1Q92922 1105 aaPredicted RBP15.38■□□□□ 0.05
THSD1-201ENST00000258613 NAP1L5Q96NT1 182 aaPredicted RBP15.38■□□□□ 0.05
THSD1-201ENST00000258613 NAPBQ9H115 298 aa15.38■□□□□ 0.05
THSD1-201ENST00000258613 NUP62CLQ9H1M0 184 aa15.38■□□□□ 0.05
THSD1-201ENST00000258613 CSPP1Q1MSJ5 1256 aa15.37■□□□□ 0.05
THSD1-201ENST00000258613 LLPHQ9BRT6 129 aaKnown RBP15.37■□□□□ 0.05
THSD1-201ENST00000258613 RAI14Q9P0K7 980 aa15.37■□□□□ 0.05
THSD1-201ENST00000258613 ZSWIM5Q9P217 1185 aa15.37■□□□□ 0.05
THSD1-201ENST00000258613 SLC4A4Q9Y6R1 1079 aa15.37■□□□□ 0.05
THSD1-201ENST00000258613 KIF28PB7ZC32 967 aa15.37■□□□□ 0.05
THSD1-201ENST00000258613 ANKRD18AQ8IVF6 992 aa15.37■□□□□ 0.05
THSD1-201ENST00000258613 GOLPH3LQ9H4A5 285 aa15.37■□□□□ 0.05
THSD1-201ENST00000258613 CYP7A1P22680 504 aa15.36■□□□□ 0.05
THSD1-201ENST00000258613 DYNLL1P63167 89 aaKnown RBP15.36■□□□□ 0.05
THSD1-201ENST00000258613 LUZP1Q86V48 1076 aa15.36■□□□□ 0.05
THSD1-201ENST00000258613 TNMDQ9H2S6 317 aa15.36■□□□□ 0.05
THSD1-201ENST00000258613 MINPP1Q9UNW1 487 aa15.36■□□□□ 0.05
THSD1-201ENST00000258613 ZNF652Q9Y2D9 606 aa15.36■□□□□ 0.05
THSD1-201ENST00000258613 MINDY4BA8MYZ0 360 aa15.36■□□□□ 0.05
THSD1-201ENST00000258613 ADCY5O95622 1261 aa15.36■□□□□ 0.05
THSD1-201ENST00000258613 TXNRD3Q86VQ6 643 aa15.36■□□□□ 0.05
THSD1-201ENST00000258613 CCNL1Q9UK58 526 aaPredicted RBP15.36■□□□□ 0.05
THSD1-201ENST00000258613 PTMAP06454 111 aaKnown RBP15.36■□□□□ 0.05
THSD1-201ENST00000258613 TDO2P48775 406 aa15.36■□□□□ 0.05
THSD1-201ENST00000258613 HMGN5P82970 282 aaKnown RBP15.36■□□□□ 0.05
THSD1-201ENST00000258613 NFXL1Q6ZNB6 911 aa15.36■□□□□ 0.05
THSD1-201ENST00000258613 ZSCAN30Q86W11 494 aa15.36■□□□□ 0.05
THSD1-201ENST00000258613 PATL2C9JE40 543 aaKnown RBP15.35■□□□□ 0.05
THSD1-201ENST00000258613 VPS72Q15906 364 aa15.35■□□□□ 0.05
THSD1-201ENST00000258613 NBPF5PQ86XG9 351 aaPredicted RBP15.35■□□□□ 0.05
THSD1-201ENST00000258613 CHMP4CQ96CF2 233 aa15.35■□□□□ 0.05
THSD1-201ENST00000258613 C8orf76Q96K31 380 aa15.35■□□□□ 0.05
THSD1-201ENST00000258613 ANGEL1Q9UNK9 670 aaKnown RBP15.35■□□□□ 0.05
THSD1-201ENST00000258613 CLIC4Q9Y696 253 aa15.35■□□□□ 0.05
THSD1-201ENST00000258613 ELP1O95163 1332 aa15.35■□□□□ 0.05
THSD1-201ENST00000258613 NPHP1O15259 732 aa15.35■□□□□ 0.05
THSD1-201ENST00000258613 VPS37DQ86XT2 251 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms