RNA–Protein interactions for RNA: ENST00000257765.9

KHDC1-201, Transcript of KH domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene KHDC1, Length 1,134 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KHDC1-201ENST00000257765 RABL6Q3YEC7 729 aaPredicted RBP23.27■■□□□ 1.32
KHDC1-201ENST00000257765 OPTNQ96CV9 577 aa23.27■■□□□ 1.32
KHDC1-201ENST00000257765 TEPSINQ96N21 525 aa23.27■■□□□ 1.32
KHDC1-201ENST00000257765 MYH13Q9UKX3 1938 aa23.26■■□□□ 1.31
KHDC1-201ENST00000257765 TESPA1A2RU30 521 aaPredicted RBP23.26■■□□□ 1.31
KHDC1-201ENST00000257765 TCP10L2B9ZVM9 353 aa23.26■■□□□ 1.31
KHDC1-201ENST00000257765 CHAF1AQ13111 956 aaPredicted RBP23.25■■□□□ 1.31
KHDC1-201ENST00000257765 METTL24Q5JXM2 366 aa23.25■■□□□ 1.31
KHDC1-201ENST00000257765 FBXO33Q7Z6M2 555 aa23.25■■□□□ 1.31
KHDC1-201ENST00000257765 CDAN1Q8IWY9 1227 aa23.25■■□□□ 1.31
KHDC1-201ENST00000257765 CD99L2Q8TCZ2 262 aa23.25■■□□□ 1.31
KHDC1-201ENST00000257765 TBC1D22AQ8WUA7 517 aa23.25■■□□□ 1.31
KHDC1-201ENST00000257765 PTPN18Q99952 460 aa23.25■■□□□ 1.31
KHDC1-201ENST00000257765 TMEM39BQ9GZU3 492 aa23.25■■□□□ 1.31
KHDC1-201ENST00000257765 IQSEC3Q9UPP2 1182 aaPredicted RBP23.25■■□□□ 1.31
KHDC1-201ENST00000257765 ZNF316A6NFI3 1004 aaPredicted RBP23.24■■□□□ 1.31
KHDC1-201ENST00000257765 FRAT2O75474 233 aaPredicted RBP23.24■■□□□ 1.31
KHDC1-201ENST00000257765 GRIK5Q16478 980 aa23.24■■□□□ 1.31
KHDC1-201ENST00000257765 LRRC24Q50LG9 513 aa23.24■■□□□ 1.31
KHDC1-201ENST00000257765 CAVIN4Q5BKX8 364 aa23.24■■□□□ 1.31
KHDC1-201ENST00000257765 ANKRD44Q8N8A2 993 aa23.24■■□□□ 1.31
KHDC1-201ENST00000257765 ZNF521Q96K83 1311 aa23.24■■□□□ 1.31
KHDC1-201ENST00000257765 HDLBPQ00341 1268 aaKnown RBP23.23■■□□□ 1.31
KHDC1-201ENST00000257765 INTS3Q68E01 1043 aaKnown RBP23.23■■□□□ 1.31
KHDC1-201ENST00000257765 PPP1R3FQ6ZSY5 799 aaPredicted RBP23.23■■□□□ 1.31
KHDC1-201ENST00000257765 MRPL50Q8N5N7 158 aaKnown RBP23.23■■□□□ 1.31
KHDC1-201ENST00000257765 VGLL2Q8N8G2 317 aa23.23■■□□□ 1.31
KHDC1-201ENST00000257765 HTTP42858 3142 aa23.22■■□□□ 1.31
KHDC1-201ENST00000257765 PDE8BO95263 885 aa23.22■■□□□ 1.31
KHDC1-201ENST00000257765 SP3Q02447 781 aa23.22■■□□□ 1.31
KHDC1-201ENST00000257765 VGLL4Q14135 290 aa23.22■■□□□ 1.31
KHDC1-201ENST00000257765 DDX55Q8NHQ9 600 aaKnown RBP eCLIP23.22■■□□□ 1.31
KHDC1-201ENST00000257765 MS4A4AQ96JQ5 239 aa23.22■■□□□ 1.31
KHDC1-201ENST00000257765 EFCC1Q9HA90 598 aa23.22■■□□□ 1.31
KHDC1-201ENST00000257765 PTPN22Q9Y2R2 807 aa23.22■■□□□ 1.31
KHDC1-201ENST00000257765 CSADQ9Y600 493 aa23.22■■□□□ 1.31
KHDC1-201ENST00000257765 PTPRCP08575 1304 aa23.22■■□□□ 1.31
KHDC1-201ENST00000257765 MAP3K9P80192 1104 aa23.21■■□□□ 1.31
KHDC1-201ENST00000257765 CNKSR2Q8WXI2 1034 aa23.21■■□□□ 1.31
KHDC1-201ENST00000257765 TEKT1Q969V4 418 aa23.21■■□□□ 1.31
KHDC1-201ENST00000257765 PCDH10Q9P2E7 1040 aa23.21■■□□□ 1.31
KHDC1-201ENST00000257765 ZEB1P37275 1124 aaPredicted RBP23.2■■□□□ 1.3
KHDC1-201ENST00000257765 BRI3BPQ8WY22 251 aa23.2■■□□□ 1.3
KHDC1-201ENST00000257765 TMOD2Q9NZR1 351 aa23.2■■□□□ 1.3
KHDC1-201ENST00000257765 MAST3O60307 1309 aa23.19■■□□□ 1.3
KHDC1-201ENST00000257765 CCL15-CCL14A0A0B4J2E2 113 aa23.19■■□□□ 1.3
KHDC1-201ENST00000257765 GTF2A2P52657 109 aa23.19■■□□□ 1.3
KHDC1-201ENST00000257765 CCL15Q16663 113 aa23.19■■□□□ 1.3
KHDC1-201ENST00000257765 KLHDC4Q8TBB5 520 aa23.19■■□□□ 1.3
KHDC1-201ENST00000257765 OTUD5Q96G74 571 aa23.19■■□□□ 1.3
KHDC1-201ENST00000257765 KIF16BQ96L93 1317 aa23.18■■□□□ 1.3
KHDC1-201ENST00000257765 POTEFA5A3E0 1075 aa23.18■■□□□ 1.3
KHDC1-201ENST00000257765 BCAMP50895 628 aa23.18■■□□□ 1.3
KHDC1-201ENST00000257765 CACNB3P54284 484 aa23.18■■□□□ 1.3
KHDC1-201ENST00000257765 TAF1CQ15572 869 aaPredicted RBP23.18■■□□□ 1.3
KHDC1-201ENST00000257765 ZDHHC15Q96MV8 337 aa23.18■■□□□ 1.3
KHDC1-201ENST00000257765 IFIT1P09914 478 aaKnown RBP23.17■■□□□ 1.3
KHDC1-201ENST00000257765 PUM3Q15397 648 aaKnown RBP23.17■■□□□ 1.3
KHDC1-201ENST00000257765 ARMC5Q96C12 935 aa23.17■■□□□ 1.3
KHDC1-201ENST00000257765 ZFYVE28Q9HCC9 887 aa23.17■■□□□ 1.3
KHDC1-201ENST00000257765 SUGT1Q9Y2Z0 365 aa23.17■■□□□ 1.3
KHDC1-201ENST00000257765 KIAA0100Q14667 2235 aaKnown RBP23.17■■□□□ 1.3
KHDC1-201ENST00000257765 RPAP1Q9BWH6 1393 aaPredicted RBP23.16■■□□□ 1.3
KHDC1-201ENST00000257765 SPDYE5A6NIY4 337 aa23.16■■□□□ 1.3
KHDC1-201ENST00000257765 CAP1Q01518 475 aa23.16■■□□□ 1.3
KHDC1-201ENST00000257765 FAM83AQ86UY5 434 aa23.16■■□□□ 1.3
KHDC1-201ENST00000257765 MRIQ9BWK5 157 aa23.16■■□□□ 1.3
KHDC1-201ENST00000257765 FGFR2P21802 821 aa23.15■■□□□ 1.3
KHDC1-201ENST00000257765 ARHGEF6Q15052 776 aa23.15■■□□□ 1.3
KHDC1-201ENST00000257765 FKBP1CQ5VVH2 108 aa23.15■■□□□ 1.3
KHDC1-201ENST00000257765 FAM43AQ8N2R8 423 aa23.15■■□□□ 1.3
KHDC1-201ENST00000257765 SSH1Q8WYL5 1049 aa23.15■■□□□ 1.3
KHDC1-201ENST00000257765 HOOK2Q96ED9 719 aa23.15■■□□□ 1.3
KHDC1-201ENST00000257765 WRNIP1Q96S55 665 aa23.15■■□□□ 1.3
KHDC1-201ENST00000257765 USP44Q9H0E7 712 aa23.15■■□□□ 1.3
KHDC1-201ENST00000257765 SNCAIPQ9Y6H5 919 aa23.15■■□□□ 1.3
KHDC1-201ENST00000257765 E9PSI1 815 aa23.14■■□□□ 1.29
KHDC1-201ENST00000257765 APOBEC3HQ6NTF7 200 aaKnown RBP23.14■■□□□ 1.29
KHDC1-201ENST00000257765 CENPFP49454 3210 aa23.13■■□□□ 1.29
KHDC1-201ENST00000257765 WDHD1O75717 1129 aaPredicted RBP23.13■■□□□ 1.29
KHDC1-201ENST00000257765 SLC5A1P13866 664 aa23.13■■□□□ 1.29
KHDC1-201ENST00000257765 HHIPL2Q6UWX4 724 aa23.13■■□□□ 1.29
KHDC1-201ENST00000257765 ERO1BQ86YB8 467 aa23.13■■□□□ 1.29
KHDC1-201ENST00000257765 ZSWIM8A7E2V4 1837 aa23.12■■□□□ 1.29
KHDC1-201ENST00000257765 AK9Q5TCS8 1911 aa23.12■■□□□ 1.29
KHDC1-201ENST00000257765 EYA2O00167 538 aa23.12■■□□□ 1.29
KHDC1-201ENST00000257765 CETPP11597 493 aa23.12■■□□□ 1.29
KHDC1-201ENST00000257765 DCAF15Q66K64 600 aa23.12■■□□□ 1.29
KHDC1-201ENST00000257765 RFX5P48382 616 aaPredicted RBP23.11■■□□□ 1.29
KHDC1-201ENST00000257765 WDR66Q8TBY9 1149 aa23.11■■□□□ 1.29
KHDC1-201ENST00000257765 LPIN2Q92539 896 aa23.11■■□□□ 1.29
KHDC1-201ENST00000257765 ZKSCAN4Q969J2 545 aaPredicted RBP23.11■■□□□ 1.29
KHDC1-201ENST00000257765 GCC1Q96CN9 775 aa23.11■■□□□ 1.29
KHDC1-201ENST00000257765 ZCCHC17Q9NP64 241 aaKnown RBP23.11■■□□□ 1.29
KHDC1-201ENST00000257765 SNAPC2Q13487 334 aa23.1■■□□□ 1.29
KHDC1-201ENST00000257765 ZNF333Q96JL9 665 aa23.1■■□□□ 1.29
KHDC1-201ENST00000257765 ZNF341Q9BYN7 854 aa23.1■■□□□ 1.29
KHDC1-201ENST00000257765 PTCH2Q9Y6C5 1203 aa23.1■■□□□ 1.29
KHDC1-201ENST00000257765 IRF6O14896 467 aa23.09■■□□□ 1.29
KHDC1-201ENST00000257765 PPIL2Q13356 520 aa23.09■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms