RNA–Protein interactions for RNA: ENST00000254719.9

RPA1-201, Transcript of replication protein A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPA1, Length 4,340 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-201ENST00000254719 USP28Q96RU2 1077 aa10.81□□□□□ -0.68
RPA1-201ENST00000254719 BCL2L12Q9HB09 334 aa10.81□□□□□ -0.68
RPA1-201ENST00000254719 WWC3Q9ULE0 1092 aa10.81□□□□□ -0.68
RPA1-201ENST00000254719 NID2Q14112 1375 aa10.81□□□□□ -0.68
RPA1-201ENST00000254719 WNT7AO00755 349 aa10.81□□□□□ -0.68
RPA1-201ENST00000254719 KDM4AO75164 1064 aa10.81□□□□□ -0.68
RPA1-201ENST00000254719 CDK11BP21127 795 aaKnown RBP10.81□□□□□ -0.68
RPA1-201ENST00000254719 ARID4AP29374 1257 aaPredicted RBP10.81□□□□□ -0.68
RPA1-201ENST00000254719 SUSD4Q5VX71 490 aa10.81□□□□□ -0.68
RPA1-201ENST00000254719 OTUD7BQ6GQQ9 843 aa10.81□□□□□ -0.68
RPA1-201ENST00000254719 C11orf57Q6ZUT1 292 aaPredicted RBP10.81□□□□□ -0.68
RPA1-201ENST00000254719 IGDCC4Q8TDY8 1250 aa10.81□□□□□ -0.68
RPA1-201ENST00000254719 TTC12Q9H892 705 aaPredicted RBP10.81□□□□□ -0.68
RPA1-201ENST00000254719 GOLGA6L19H0YKK7 550 aa10.81□□□□□ -0.68
RPA1-201ENST00000254719 PHKA1P46020 1223 aa10.81□□□□□ -0.68
RPA1-201ENST00000254719 AXDND1Q5T1B0 1012 aaPredicted RBP10.81□□□□□ -0.68
RPA1-201ENST00000254719 DHX40Q8IX18 779 aaKnown RBP10.81□□□□□ -0.68
RPA1-201ENST00000254719 ZBTB9Q96C00 473 aa10.81□□□□□ -0.68
RPA1-201ENST00000254719 HMG20BQ9P0W2 317 aa10.81□□□□□ -0.68
RPA1-201ENST00000254719 KAT6BQ8WYB5 2073 aa10.81□□□□□ -0.68
RPA1-201ENST00000254719 CAMTA2O94983 1202 aa10.8□□□□□ -0.68
RPA1-201ENST00000254719 RCOR1Q9UKL0 485 aa10.8□□□□□ -0.68
RPA1-201ENST00000254719 ABCC12Q96J65 1359 aa10.8□□□□□ -0.68
RPA1-201ENST00000254719 BLOC1S2Q6QNY1 142 aa10.8□□□□□ -0.68
RPA1-201ENST00000254719 SEC31BQ9NQW1 1179 aa10.8□□□□□ -0.68
RPA1-201ENST00000254719 STRN4Q9NRL3 753 aa10.8□□□□□ -0.68
RPA1-201ENST00000254719 RNF113AO15541 343 aaKnown RBP10.8□□□□□ -0.68
RPA1-201ENST00000254719 KCNQ2O43526 872 aa10.8□□□□□ -0.68
RPA1-201ENST00000254719 BMP6P22004 513 aa10.8□□□□□ -0.68
RPA1-201ENST00000254719 ARID5BQ14865 1188 aa10.8□□□□□ -0.68
RPA1-201ENST00000254719 DHX32Q7L7V1 743 aaKnown RBP10.8□□□□□ -0.68
RPA1-201ENST00000254719 LUZP1Q86V48 1076 aa10.8□□□□□ -0.68
RPA1-201ENST00000254719 HOMEZQ8IX15 550 aa10.8□□□□□ -0.68
RPA1-201ENST00000254719 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.8□□□□□ -0.68
RPA1-201ENST00000254719 WDHD1O75717 1129 aaPredicted RBP10.8□□□□□ -0.68
RPA1-201ENST00000254719 ADD2P35612 726 aa10.8□□□□□ -0.68
RPA1-201ENST00000254719 FOXP4Q8IVH2 680 aaPredicted RBP10.8□□□□□ -0.68
RPA1-201ENST00000254719 MAP3K14Q99558 947 aa10.8□□□□□ -0.68
RPA1-201ENST00000254719 ANKRD31Q8N7Z5 1873 aa10.79□□□□□ -0.68
RPA1-201ENST00000254719 TSPY26PQ9H489 355 aa10.79□□□□□ -0.68
RPA1-201ENST00000254719 DACT1Q9NYF0 836 aa10.79□□□□□ -0.68
RPA1-201ENST00000254719 SPATA31A1Q5TZJ5 1347 aa10.79□□□□□ -0.68
RPA1-201ENST00000254719 NPHP1O15259 732 aa10.79□□□□□ -0.68
RPA1-201ENST00000254719 NTSR2O95665 410 aa10.79□□□□□ -0.68
RPA1-201ENST00000254719 KRT32Q14532 448 aa10.79□□□□□ -0.68
RPA1-201ENST00000254719 CAMK4Q16566 473 aa10.79□□□□□ -0.68
RPA1-201ENST00000254719 LARP1BQ659C4 914 aaKnown RBP10.79□□□□□ -0.68
RPA1-201ENST00000254719 DNAH12Q6ZR08 3092 aa10.79□□□□□ -0.68
RPA1-201ENST00000254719 ADCY5O95622 1261 aa10.79□□□□□ -0.68
RPA1-201ENST00000254719 ITGA6P23229 1130 aa10.79□□□□□ -0.68
RPA1-201ENST00000254719 CTSWP56202 376 aa10.79□□□□□ -0.68
RPA1-201ENST00000254719 MTERF4Q7Z6M4 381 aaKnown RBP10.79□□□□□ -0.68
RPA1-201ENST00000254719 FMR1NBQ8N0W7 255 aaPredicted RBP10.79□□□□□ -0.68
RPA1-201ENST00000254719 SIPA1L1O43166 1804 aa10.79□□□□□ -0.68
RPA1-201ENST00000254719 SYNE3Q6ZMZ3 975 aa10.78□□□□□ -0.68
RPA1-201ENST00000254719 CCDC88AQ3V6T2 1871 aa10.78□□□□□ -0.68
RPA1-201ENST00000254719 GUCY1A2P33402 732 aa10.78□□□□□ -0.68
RPA1-201ENST00000254719 TRDNQ13061 729 aa10.78□□□□□ -0.68
RPA1-201ENST00000254719 DHX8Q14562 1220 aaKnown RBP10.78□□□□□ -0.68
RPA1-201ENST00000254719 NCAPHQ15003 741 aa10.78□□□□□ -0.68
RPA1-201ENST00000254719 NPY5RQ15761 445 aa10.78□□□□□ -0.68
RPA1-201ENST00000254719 MAP7D2Q96T17 732 aa10.78□□□□□ -0.68
RPA1-201ENST00000254719 CLIC4Q9Y696 253 aa10.78□□□□□ -0.68
RPA1-201ENST00000254719 MYH1P12882 1939 aa10.78□□□□□ -0.68
RPA1-201ENST00000254719 LRRC37AA6NMS7 1700 aa10.78□□□□□ -0.68
RPA1-201ENST00000254719 BECN2A8MW95 431 aa10.78□□□□□ -0.68
RPA1-201ENST00000254719 PTPAQ15257 358 aa10.78□□□□□ -0.68
RPA1-201ENST00000254719 CBX8Q9HC52 389 aa10.78□□□□□ -0.68
RPA1-201ENST00000254719 PTPDC1A2A3K4 754 aa10.77□□□□□ -0.68
RPA1-201ENST00000254719 KLRK1P26718 216 aa10.77□□□□□ -0.68
RPA1-201ENST00000254719 CCT2P78371 535 aaKnown RBP10.77□□□□□ -0.68
RPA1-201ENST00000254719 KIAA1524Q8TCG1 905 aa10.77□□□□□ -0.68
RPA1-201ENST00000254719 BRWD3Q6RI45 1802 aa10.77□□□□□ -0.68
RPA1-201ENST00000254719 GPTP24298 496 aa10.77□□□□□ -0.69
RPA1-201ENST00000254719 EVA1CP58658 441 aa10.77□□□□□ -0.69
RPA1-201ENST00000254719 ZNF330Q9Y3S2 320 aaPredicted RBP10.77□□□□□ -0.69
RPA1-201ENST00000254719 NRXN2Q9P2S2 1712 aa10.77□□□□□ -0.69
RPA1-201ENST00000254719 VPS37CA5D8V6 355 aaPredicted RBP10.77□□□□□ -0.69
RPA1-201ENST00000254719 PDE8BO95263 885 aa10.77□□□□□ -0.69
RPA1-201ENST00000254719 TPM2P07951 284 aa10.77□□□□□ -0.69
RPA1-201ENST00000254719 TOB1P50616 345 aaPredicted RBP10.77□□□□□ -0.69
RPA1-201ENST00000254719 GRIN1Q05586 938 aa10.77□□□□□ -0.69
RPA1-201ENST00000254719 RASGRF1Q13972 1273 aa10.77□□□□□ -0.69
RPA1-201ENST00000254719 TICAM2Q86XR7 235 aa10.77□□□□□ -0.69
RPA1-201ENST00000254719 BBXQ8WY36 941 aaPredicted RBP10.77□□□□□ -0.69
RPA1-201ENST00000254719 ZNF804BA4D1E1 1349 aa10.77□□□□□ -0.69
RPA1-201ENST00000254719 KCNQ4P56696 695 aa10.77□□□□□ -0.69
RPA1-201ENST00000254719 HAND2P61296 217 aa10.77□□□□□ -0.69
RPA1-201ENST00000254719 LRMPQ12912 555 aa10.77□□□□□ -0.69
RPA1-201ENST00000254719 ZNF274Q96GC6 653 aaPredicted RBP10.77□□□□□ -0.69
RPA1-201ENST00000254719 TRERF1Q96PN7 1200 aa10.77□□□□□ -0.69
RPA1-201ENST00000254719 FUT2Q10981 343 aa10.76□□□□□ -0.69
RPA1-201ENST00000254719 CCDC102BQ68D86 513 aa10.76□□□□□ -0.69
RPA1-201ENST00000254719 STRBPQ96SI9 672 aaKnown RBP10.76□□□□□ -0.69
RPA1-201ENST00000254719 CLSTN2Q9H4D0 955 aa10.76□□□□□ -0.69
RPA1-201ENST00000254719 HOOK1Q9UJC3 728 aaKnown RBP10.76□□□□□ -0.69
RPA1-201ENST00000254719 U3KPZ7 1027 aaPredicted RBP10.76□□□□□ -0.69
RPA1-201ENST00000254719 VEGFAP15692 232 aaPredicted RBP10.76□□□□□ -0.69
RPA1-201ENST00000254719 CCDC73Q6ZRK6 1079 aa10.76□□□□□ -0.69
RPA1-201ENST00000254719 RAB11FIP4Q86YS3 637 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms