RNA–Protein interactions for RNA: ENST00000254231.4

LIN28A-201, Transcript of lin-28 homolog A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN28A, Length 3,458 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28A-201ENST00000254231 GRAPQ13588 217 aa13.79□□□□□ -0.2
LIN28A-201ENST00000254231 AOC3Q16853 763 aa13.79□□□□□ -0.2
LIN28A-201ENST00000254231 PRAMEF18Q5VWM3 479 aa13.79□□□□□ -0.2
LIN28A-201ENST00000254231 GRAPLQ8TC17 118 aaPredicted RBP13.79□□□□□ -0.2
LIN28A-201ENST00000254231 TAF1P21675 1872 aa13.79□□□□□ -0.2
LIN28A-201ENST00000254231 GNL2Q13823 731 aaKnown RBP13.78□□□□□ -0.2
LIN28A-201ENST00000254231 PARP4Q9UKK3 1724 aaKnown RBP13.78□□□□□ -0.2
LIN28A-201ENST00000254231 CLRN2A0PK11 232 aa13.78□□□□□ -0.2
LIN28A-201ENST00000254231 LRRFIP1Q32MZ4 808 aaKnown RBP13.78□□□□□ -0.2
LIN28A-201ENST00000254231 TRMT1LQ7Z2T5 733 aaKnown RBP13.78□□□□□ -0.2
LIN28A-201ENST00000254231 APPBP2Q92624 585 aa13.78□□□□□ -0.2
LIN28A-201ENST00000254231 STX8Q9UNK0 236 aa13.78□□□□□ -0.2
LIN28A-201ENST00000254231 U3KPZ7 1027 aaPredicted RBP13.78□□□□□ -0.2
LIN28A-201ENST00000254231 PLCH1Q4KWH8 1693 aa13.78□□□□□ -0.2
LIN28A-201ENST00000254231 ZNF609O15014 1411 aa13.78□□□□□ -0.2
LIN28A-201ENST00000254231 MECOMQ03112 1051 aa13.78□□□□□ -0.2
LIN28A-201ENST00000254231 RUFY3Q7L099 469 aa13.78□□□□□ -0.2
LIN28A-201ENST00000254231 SLC44A5Q8NCS7 719 aa13.78□□□□□ -0.2
LIN28A-201ENST00000254231 DYNLL2Q96FJ2 89 aa13.78□□□□□ -0.2
LIN28A-201ENST00000254231 TPCN1Q9ULQ1 816 aa13.78□□□□□ -0.2
LIN28A-201ENST00000254231 PNPLA7Q6ZV29 1317 aa13.78□□□□□ -0.2
LIN28A-201ENST00000254231 KDM3BQ7LBC6 1761 aa13.78□□□□□ -0.2
LIN28A-201ENST00000254231 IFIT3O14879 490 aaKnown RBP13.77□□□□□ -0.2
LIN28A-201ENST00000254231 GRM1Q13255 1194 aa13.77□□□□□ -0.2
LIN28A-201ENST00000254231 ME3Q16798 604 aa13.77□□□□□ -0.2
LIN28A-201ENST00000254231 STOX1Q6ZVD7 989 aa13.77□□□□□ -0.2
LIN28A-201ENST00000254231 E7EWF7 191 aa13.77□□□□□ -0.21
LIN28A-201ENST00000254231 USP17L8P0C7I0 530 aa13.77□□□□□ -0.21
LIN28A-201ENST00000254231 LARP1BQ659C4 914 aaKnown RBP13.77□□□□□ -0.21
LIN28A-201ENST00000254231 GLI3P10071 1580 aa13.77□□□□□ -0.21
LIN28A-201ENST00000254231 PPIP5K2O43314 1243 aa13.77□□□□□ -0.21
LIN28A-201ENST00000254231 PSMA5P28066 241 aa13.77□□□□□ -0.21
LIN28A-201ENST00000254231 GJB2P29033 226 aa13.77□□□□□ -0.21
LIN28A-201ENST00000254231 ZYXQ15942 572 aaKnown RBP13.77□□□□□ -0.21
LIN28A-201ENST00000254231 MAP4K1Q92918 833 aa13.77□□□□□ -0.21
LIN28A-201ENST00000254231 TTF2Q9UNY4 1162 aaKnown RBP13.77□□□□□ -0.21
LIN28A-201ENST00000254231 DDX49Q9Y6V7 483 aaKnown RBP13.77□□□□□ -0.21
LIN28A-201ENST00000254231 TOGARAM1Q9Y4F4 1720 aa13.76□□□□□ -0.21
LIN28A-201ENST00000254231 KLF18A0A0U1RQI7 1052 aa13.76□□□□□ -0.21
LIN28A-201ENST00000254231 NMT2O60551 498 aa13.76□□□□□ -0.21
LIN28A-201ENST00000254231 ZRSR1Q15695 479 aaKnown RBP13.76□□□□□ -0.21
LIN28A-201ENST00000254231 SENP2Q9HC62 589 aa13.76□□□□□ -0.21
LIN28A-201ENST00000254231 LIMCH1Q9UPQ0 1083 aa13.76□□□□□ -0.21
LIN28A-201ENST00000254231 PRC1O43663 620 aa13.76□□□□□ -0.21
LIN28A-201ENST00000254231 SF3B3Q15393 1217 aaKnown RBP13.76□□□□□ -0.21
LIN28A-201ENST00000254231 ZMYM1Q5SVZ6 1142 aa13.76□□□□□ -0.21
LIN28A-201ENST00000254231 CLEC10AQ8IUN9 316 aa13.76□□□□□ -0.21
LIN28A-201ENST00000254231 PLA2G12BQ9BX93 195 aa13.76□□□□□ -0.21
LIN28A-201ENST00000254231 NACAP1Q9BZK3 213 aa13.76□□□□□ -0.21
LIN28A-201ENST00000254231 MKNK2Q9HBH9 465 aa13.76□□□□□ -0.21
LIN28A-201ENST00000254231 ITGB4P16144 1822 aa13.76□□□□□ -0.21
LIN28A-201ENST00000254231 GOLGA8BA8MQT2 603 aa13.76□□□□□ -0.21
LIN28A-201ENST00000254231 ZSCAN25Q6NSZ9 544 aa13.76□□□□□ -0.21
LIN28A-201ENST00000254231 LARGE2Q8N3Y3 721 aa13.76□□□□□ -0.21
LIN28A-201ENST00000254231 NKX2-3Q8TAU0 364 aa13.76□□□□□ -0.21
LIN28A-201ENST00000254231 PHKBQ93100 1093 aa13.76□□□□□ -0.21
LIN28A-201ENST00000254231 FZD1Q9UP38 647 aa13.76□□□□□ -0.21
LIN28A-201ENST00000254231 PXDNLA1KZ92 1463 aa13.76□□□□□ -0.21
LIN28A-201ENST00000254231 ADD2P35612 726 aa13.75□□□□□ -0.21
LIN28A-201ENST00000254231 TTF1Q15361 905 aaPredicted RBP13.75□□□□□ -0.21
LIN28A-201ENST00000254231 ZNF804AQ7Z570 1209 aa13.75□□□□□ -0.21
LIN28A-201ENST00000254231 VGLL2Q8N8G2 317 aa13.75□□□□□ -0.21
LIN28A-201ENST00000254231 CPVLQ9H3G5 476 aa13.75□□□□□ -0.21
LIN28A-201ENST00000254231 ATRNO75882 1429 aa13.75□□□□□ -0.21
LIN28A-201ENST00000254231 ANKRD2Q9GZV1 360 aa13.75□□□□□ -0.21
LIN28A-201ENST00000254231 LRRC37A3O60309 1634 aa13.75□□□□□ -0.21
LIN28A-201ENST00000254231 UBE2Q2LH0YL09 131 aa13.74□□□□□ -0.21
LIN28A-201ENST00000254231 NECTIN1Q15223 517 aa13.74□□□□□ -0.21
LIN28A-201ENST00000254231 MFSD6Q6ZSS7 791 aa13.74□□□□□ -0.21
LIN28A-201ENST00000254231 IFNL3Q8IZI9 196 aa13.74□□□□□ -0.21
LIN28A-201ENST00000254231 ABCA3Q99758 1704 aa13.74□□□□□ -0.21
LIN28A-201ENST00000254231 DPEP1P16444 411 aa13.74□□□□□ -0.21
LIN28A-201ENST00000254231 TM4SF1P30408 202 aa13.74□□□□□ -0.21
LIN28A-201ENST00000254231 TMEM67Q5HYA8 995 aa13.74□□□□□ -0.21
LIN28A-201ENST00000254231 ADD1P35611 737 aaKnown RBP13.74□□□□□ -0.21
LIN28A-201ENST00000254231 IKQ13123 557 aaPredicted RBP13.74□□□□□ -0.21
LIN28A-201ENST00000254231 UBE4AQ14139 1066 aa13.74□□□□□ -0.21
LIN28A-201ENST00000254231 TBC1D16Q8TBP0 767 aa13.74□□□□□ -0.21
LIN28A-201ENST00000254231 CD209Q9NNX6 404 aa13.74□□□□□ -0.21
LIN28A-201ENST00000254231 VIRMAQ69YN4 1812 aaKnown RBP13.74□□□□□ -0.21
LIN28A-201ENST00000254231 UBAC1Q9BSL1 405 aa13.73□□□□□ -0.21
LIN28A-201ENST00000254231 XDHP47989 1333 aa13.73□□□□□ -0.21
LIN28A-201ENST00000254231 TSPY2A6NKD2 308 aa13.73□□□□□ -0.21
LIN28A-201ENST00000254231 GOLGA6L22H0YM25 854 aa13.73□□□□□ -0.21
LIN28A-201ENST00000254231 ARHGAP27Q6ZUM4 889 aa13.73□□□□□ -0.21
LIN28A-201ENST00000254231 ERICH2A1L162 156 aa13.73□□□□□ -0.21
LIN28A-201ENST00000254231 PDE6BP35913 854 aa13.73□□□□□ -0.21
LIN28A-201ENST00000254231 AIFM3Q96NN9 605 aa13.73□□□□□ -0.21
LIN28A-201ENST00000254231 HOMER1Q86YM7 354 aa13.72□□□□□ -0.21
LIN28A-201ENST00000254231 TBC1D10CQ8IV04 446 aa13.72□□□□□ -0.21
LIN28A-201ENST00000254231 RBM27Q9P2N5 1060 aaKnown RBP13.72□□□□□ -0.21
LIN28A-201ENST00000254231 AFDNP55196 1824 aaKnown RBP13.72□□□□□ -0.21
LIN28A-201ENST00000254231 GOLGA6L4A6NEF3 574 aa13.72□□□□□ -0.21
LIN28A-201ENST00000254231 PLSCR1O15162 318 aa13.72□□□□□ -0.21
LIN28A-201ENST00000254231 SRGNP10124 158 aa13.72□□□□□ -0.21
LIN28A-201ENST00000254231 POLD1P28340 1107 aa13.72□□□□□ -0.21
LIN28A-201ENST00000254231 SH3RF3Q8TEJ3 882 aaPredicted RBP13.72□□□□□ -0.21
LIN28A-201ENST00000254231 AK9Q5TCS8 1911 aa13.72□□□□□ -0.21
LIN28A-201ENST00000254231 DLK2Q6UY11 383 aa13.72□□□□□ -0.21
LIN28A-201ENST00000254231 CCDC84Q86UT8 332 aaPredicted RBP13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms