RNA–Protein interactions for RNA: ENST00000248958.4

SDF2L1-201, Transcript of stromal cell derived factor 2 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2L1, Length 865 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2L1-201ENST00000248958 CDCA5Q96FF9 252 aa29.96■■■□□ 2.39
SDF2L1-201ENST00000248958 PRMT6Q96LA8 375 aaPredicted RBP29.96■■■□□ 2.39
SDF2L1-201ENST00000248958 UQCRFS1P1P0C7P4 283 aa29.95■■■□□ 2.39
SDF2L1-201ENST00000248958 HHIPL1Q96JK4 782 aa29.95■■■□□ 2.39
SDF2L1-201ENST00000248958 EXOC6BQ9Y2D4 811 aa29.95■■■□□ 2.39
SDF2L1-201ENST00000248958 GRIK5Q16478 980 aa29.94■■■□□ 2.38
SDF2L1-201ENST00000248958 C2orf69Q8N8R5 385 aa29.94■■■□□ 2.38
SDF2L1-201ENST00000248958 ARID4AP29374 1257 aaPredicted RBP29.93■■■□□ 2.38
SDF2L1-201ENST00000248958 RASGRF1Q13972 1273 aa29.93■■■□□ 2.38
SDF2L1-201ENST00000248958 CCDC158Q5M9N0 1113 aa29.93■■■□□ 2.38
SDF2L1-201ENST00000248958 HHIPL2Q6UWX4 724 aa29.93■■■□□ 2.38
SDF2L1-201ENST00000248958 SAPCD2Q86UD0 394 aa29.93■■■□□ 2.38
SDF2L1-201ENST00000248958 SIRT2Q8IXJ6 389 aa29.93■■■□□ 2.38
SDF2L1-201ENST00000248958 GBA2Q9HCG7 927 aaPredicted RBP29.93■■■□□ 2.38
SDF2L1-201ENST00000248958 PCDHAC2Q9Y5I4 1007 aa29.93■■■□□ 2.38
SDF2L1-201ENST00000248958 PPP2R3BQ9Y5P8 575 aa29.93■■■□□ 2.38
SDF2L1-201ENST00000248958 LDHBP07195 334 aaKnown RBP29.92■■■□□ 2.38
SDF2L1-201ENST00000248958 DLK2Q6UY11 383 aa29.92■■■□□ 2.38
SDF2L1-201ENST00000248958 RAB11FIP3O75154 756 aa29.91■■■□□ 2.38
SDF2L1-201ENST00000248958 NF2P35240 595 aa29.91■■■□□ 2.38
SDF2L1-201ENST00000248958 ECE1P42892 770 aa29.91■■■□□ 2.38
SDF2L1-201ENST00000248958 FKBP1BP68106 108 aa29.91■■■□□ 2.38
SDF2L1-201ENST00000248958 TNFAIP1Q13829 316 aa29.91■■■□□ 2.38
SDF2L1-201ENST00000248958 SPDYE2Q495Y8 402 aa29.91■■■□□ 2.38
SDF2L1-201ENST00000248958 SPTY2D1Q68D10 685 aaPredicted RBP29.91■■■□□ 2.38
SDF2L1-201ENST00000248958 KIF1BPQ96EK5 621 aa29.91■■■□□ 2.38
SDF2L1-201ENST00000248958 ZDHHC15Q96MV8 337 aa29.91■■■□□ 2.38
SDF2L1-201ENST00000248958 DBNDD2Q9BQY9 259 aa29.9■■■□□ 2.38
SDF2L1-201ENST00000248958 CLRN2A0PK11 232 aa29.89■■■□□ 2.38
SDF2L1-201ENST00000248958 PRDX5P30044 214 aa29.89■■■□□ 2.38
SDF2L1-201ENST00000248958 TTC39AQ5SRH9 613 aa29.89■■■□□ 2.38
SDF2L1-201ENST00000248958 SPATA5Q8NB90 893 aa29.89■■■□□ 2.38
SDF2L1-201ENST00000248958 RHPN1Q8TCX5 695 aa29.89■■■□□ 2.38
SDF2L1-201ENST00000248958 ZNF512BQ96KM6 892 aaPredicted RBP29.89■■■□□ 2.38
SDF2L1-201ENST00000248958 DEFB129Q9H1M3 183 aa29.89■■■□□ 2.38
SDF2L1-201ENST00000248958 VEZTQ9HBM0 779 aa29.89■■■□□ 2.38
SDF2L1-201ENST00000248958 ZNF70Q9UC06 446 aaPredicted RBP29.89■■■□□ 2.38
SDF2L1-201ENST00000248958 PAPPA2Q9BXP8 1791 aa29.88■■■□□ 2.37
SDF2L1-201ENST00000248958 VEGFBP49765 207 aa29.88■■■□□ 2.37
SDF2L1-201ENST00000248958 TDRD3Q9H7E2 651 aaKnown RBP29.88■■■□□ 2.37
SDF2L1-201ENST00000248958 HMG20BQ9P0W2 317 aa29.88■■■□□ 2.37
SDF2L1-201ENST00000248958 SCAF8Q9UPN6 1271 aaKnown RBP29.88■■■□□ 2.37
SDF2L1-201ENST00000248958 SLF2Q8IX21 1173 aa29.87■■■□□ 2.37
SDF2L1-201ENST00000248958 EAF2Q96CJ1 260 aaPredicted RBP29.87■■■□□ 2.37
SDF2L1-201ENST00000248958 HUNKP57058 714 aa29.86■■■□□ 2.37
SDF2L1-201ENST00000248958 PAXIP1Q6ZW49 1069 aaPredicted RBP29.86■■■□□ 2.37
SDF2L1-201ENST00000248958 CLASRPQ8N2M8 674 aaKnown RBP29.86■■■□□ 2.37
SDF2L1-201ENST00000248958 ABCF2Q9UG63 623 aa29.86■■■□□ 2.37
SDF2L1-201ENST00000248958 TNNI2P48788 182 aa29.85■■■□□ 2.37
SDF2L1-201ENST00000248958 ERICH6Q7L0X2 663 aa29.85■■■□□ 2.37
SDF2L1-201ENST00000248958 CCDC8Q9H0W5 538 aaPredicted RBP29.85■■■□□ 2.37
SDF2L1-201ENST00000248958 TMOD2Q9NZR1 351 aa29.85■■■□□ 2.37
SDF2L1-201ENST00000248958 DBNLQ9UJU6 430 aaKnown RBP29.85■■■□□ 2.37
SDF2L1-201ENST00000248958 WDR33Q9C0J8 1336 aaKnown RBP29.85■■■□□ 2.37
SDF2L1-201ENST00000248958 MYH2Q9UKX2 1941 aa29.84■■■□□ 2.37
SDF2L1-201ENST00000248958 MCAMP43121 646 aa29.84■■■□□ 2.37
SDF2L1-201ENST00000248958 APOBEC3HQ6NTF7 200 aaKnown RBP29.84■■■□□ 2.37
SDF2L1-201ENST00000248958 AACSQ86V21 672 aa29.84■■■□□ 2.37
SDF2L1-201ENST00000248958 DZIP1Q86YF9 867 aaKnown RBP29.84■■■□□ 2.37
SDF2L1-201ENST00000248958 CAPNS2Q96L46 248 aa29.84■■■□□ 2.37
SDF2L1-201ENST00000248958 AOX1Q06278 1338 aa29.84■■■□□ 2.37
SDF2L1-201ENST00000248958 AKAP11Q9UKA4 1901 aa29.83■■■□□ 2.37
SDF2L1-201ENST00000248958 IGSF3O75054 1194 aa29.83■■■□□ 2.37
SDF2L1-201ENST00000248958 PRAMEF18Q5VWM3 479 aa29.83■■■□□ 2.37
SDF2L1-201ENST00000248958 RASA3Q14644 834 aa29.82■■■□□ 2.36
SDF2L1-201ENST00000248958 SUPT20HL1Q3ZLR7 823 aa29.82■■■□□ 2.36
SDF2L1-201ENST00000248958 FKBP1CQ5VVH2 108 aa29.82■■■□□ 2.36
SDF2L1-201ENST00000248958 CYP4F22Q6NT55 531 aa29.82■■■□□ 2.36
SDF2L1-201ENST00000248958 IL1RAPL2Q9NP60 686 aa29.82■■■□□ 2.36
SDF2L1-201ENST00000248958 DAGLAQ9Y4D2 1042 aa29.82■■■□□ 2.36
SDF2L1-201ENST00000248958 RGMBQ6NW40 437 aa29.81■■■□□ 2.36
SDF2L1-201ENST00000248958 AAMPQ13685 434 aa29.8■■■□□ 2.36
SDF2L1-201ENST00000248958 DIXDC1Q155Q3 683 aa29.8■■■□□ 2.36
SDF2L1-201ENST00000248958 ARMC9Q7Z3E5 817 aa29.8■■■□□ 2.36
SDF2L1-201ENST00000248958 FAM163AQ96GL9 167 aaPredicted RBP29.8■■■□□ 2.36
SDF2L1-201ENST00000248958 TLR7Q9NYK1 1049 aaKnown RBP29.8■■■□□ 2.36
SDF2L1-201ENST00000248958 THSD7BQ9C0I4 1608 aa29.8■■■□□ 2.36
SDF2L1-201ENST00000248958 APBB1O00213 710 aa29.79■■■□□ 2.36
SDF2L1-201ENST00000248958 GSTO1P78417 241 aa29.79■■■□□ 2.36
SDF2L1-201ENST00000248958 TTLL12Q14166 644 aaPredicted RBP29.79■■■□□ 2.36
SDF2L1-201ENST00000248958 PI16Q6UXB8 463 aa29.79■■■□□ 2.36
SDF2L1-201ENST00000248958 CCDC102AQ96A19 550 aa29.79■■■□□ 2.36
SDF2L1-201ENST00000248958 CRBNQ96SW2 442 aa29.79■■■□□ 2.36
SDF2L1-201ENST00000248958 GAKO14976 1311 aa29.78■■■□□ 2.36
SDF2L1-201ENST00000248958 TCP10L2B9ZVM9 353 aa29.78■■■□□ 2.36
SDF2L1-201ENST00000248958 LDHCP07864 332 aa29.78■■■□□ 2.36
SDF2L1-201ENST00000248958 IFIT2P09913 472 aaKnown RBP29.78■■■□□ 2.36
SDF2L1-201ENST00000248958 MAP2K2P36507 400 aa29.78■■■□□ 2.36
SDF2L1-201ENST00000248958 FAM83AQ86UY5 434 aa29.78■■■□□ 2.36
SDF2L1-201ENST00000248958 LRP2BPQ9P2M1 347 aa29.78■■■□□ 2.36
SDF2L1-201ENST00000248958 PCNTO95613 3336 aa29.78■■■□□ 2.36
SDF2L1-201ENST00000248958 PPP1R12BO60237 982 aaPredicted RBP29.77■■■□□ 2.36
SDF2L1-201ENST00000248958 LRRCC1Q9C099 1032 aa29.77■■■□□ 2.36
SDF2L1-201ENST00000248958 DCTPP1Q9H773 170 aa29.77■■■□□ 2.36
SDF2L1-201ENST00000248958 MECOMQ03112 1051 aa29.76■■■□□ 2.35
SDF2L1-201ENST00000248958 GRM1Q13255 1194 aa29.76■■■□□ 2.35
SDF2L1-201ENST00000248958 RAI14Q9P0K7 980 aa29.76■■■□□ 2.35
SDF2L1-201ENST00000248958 MROH7-TTC4A0A0A0MT08 1334 aa29.75■■■□□ 2.35
SDF2L1-201ENST00000248958 ZNF157P51786 506 aaPredicted RBP29.75■■■□□ 2.35
SDF2L1-201ENST00000248958 TBC1D9Q6ZT07 1266 aa29.75■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 534 ms