RNA–Protein interactions for RNA: ENST00000248054.9

SIN3B-201, Transcript of SIN3 transcription regulator family member B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SIN3B, Length 5,037 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3B-201ENST00000248054 PTPN14Q15678 1187 aa18.09■□□□□ 0.49
SIN3B-201ENST00000248054 CKAP2LQ8IYA6 745 aa18.09■□□□□ 0.49
SIN3B-201ENST00000248054 UBXN4Q92575 508 aa18.09■□□□□ 0.49
SIN3B-201ENST00000248054 LRRC27Q9C0I9 530 aa18.09■□□□□ 0.49
SIN3B-201ENST00000248054 HDAC9Q9UKV0 1011 aa18.09■□□□□ 0.49
SIN3B-201ENST00000248054 GOLGA6L10A6NI86 522 aa18.08■□□□□ 0.49
SIN3B-201ENST00000248054 U2AF2P26368 475 aaKnown RBP eCLIP18.08■□□□□ 0.49
SIN3B-201ENST00000248054 GPAA1O43292 621 aa18.08■□□□□ 0.49
SIN3B-201ENST00000248054 GSDMDP57764 484 aa18.08■□□□□ 0.49
SIN3B-201ENST00000248054 KIF18AQ8NI77 898 aa18.08■□□□□ 0.49
SIN3B-201ENST00000248054 WDR66Q8TBY9 1149 aa18.08■□□□□ 0.49
SIN3B-201ENST00000248054 C16orf45Q96MC5 204 aaPredicted RBP18.08■□□□□ 0.49
SIN3B-201ENST00000248054 NSFL1CQ9UNZ2 370 aaKnown RBP18.08■□□□□ 0.49
SIN3B-201ENST00000248054 POLA2Q14181 598 aa18.08■□□□□ 0.48
SIN3B-201ENST00000248054 DNAJC5Q9H3Z4 198 aa18.08■□□□□ 0.48
SIN3B-201ENST00000248054 ZNF335Q9H4Z2 1342 aaPredicted RBP18.08■□□□□ 0.48
SIN3B-201ENST00000248054 ZNF165P49910 485 aa18.07■□□□□ 0.48
SIN3B-201ENST00000248054 DNM1Q05193 864 aaKnown RBP18.07■□□□□ 0.48
SIN3B-201ENST00000248054 CEP170BQ9Y4F5 1589 aaPredicted RBP18.07■□□□□ 0.48
SIN3B-201ENST00000248054 AXDND1Q5T1B0 1012 aaPredicted RBP18.07■□□□□ 0.48
SIN3B-201ENST00000248054 TTLL5Q6EMB2 1281 aa18.07■□□□□ 0.48
SIN3B-201ENST00000248054 STX8Q9UNK0 236 aa18.07■□□□□ 0.48
SIN3B-201ENST00000248054 IQSEC2Q5JU85 1478 aa18.07■□□□□ 0.48
SIN3B-201ENST00000248054 MYO1BO43795 1136 aa18.07■□□□□ 0.48
SIN3B-201ENST00000248054 FILIP1Q7Z7B0 1213 aa18.07■□□□□ 0.48
SIN3B-201ENST00000248054 SPATA5Q8NB90 893 aa18.07■□□□□ 0.48
SIN3B-201ENST00000248054 NRKQ7Z2Y5 1582 aa18.07■□□□□ 0.48
SIN3B-201ENST00000248054 ERVV-1B6SEH8 477 aa18.07■□□□□ 0.48
SIN3B-201ENST00000248054 SSBP05455 408 aaKnown RBP eCLIP18.07■□□□□ 0.48
SIN3B-201ENST00000248054 SYKP43405 635 aa18.06■□□□□ 0.48
SIN3B-201ENST00000248054 CCDC181Q5TID7 509 aa18.06■□□□□ 0.48
SIN3B-201ENST00000248054 CALML4Q96GE6 196 aa18.06■□□□□ 0.48
SIN3B-201ENST00000248054 ZHX3Q9H4I2 956 aa18.06■□□□□ 0.48
SIN3B-201ENST00000248054 DEF6Q9H4E7 631 aa18.06■□□□□ 0.48
SIN3B-201ENST00000248054 MCM3P25205 808 aa18.06■□□□□ 0.48
SIN3B-201ENST00000248054 ZNF445P59923 1031 aa18.06■□□□□ 0.48
SIN3B-201ENST00000248054 MIGA1Q8NAN2 632 aa18.06■□□□□ 0.48
SIN3B-201ENST00000248054 TSG101Q99816 390 aa18.06■□□□□ 0.48
SIN3B-201ENST00000248054 MCM9Q9NXL9 1143 aa18.06■□□□□ 0.48
SIN3B-201ENST00000248054 LOC102724428A0A0B4J2F2 783 aa18.05■□□□□ 0.48
SIN3B-201ENST00000248054 SIK1P57059 783 aa18.05■□□□□ 0.48
SIN3B-201ENST00000248054 OGFRQ9NZT2 677 aa18.05■□□□□ 0.48
SIN3B-201ENST00000248054 ANGEL1Q9UNK9 670 aaKnown RBP18.05■□□□□ 0.48
SIN3B-201ENST00000248054 ITSN1Q15811 1721 aa18.05■□□□□ 0.48
SIN3B-201ENST00000248054 RICTORQ6R327 1708 aa18.05■□□□□ 0.48
SIN3B-201ENST00000248054 MAST3O60307 1309 aa18.05■□□□□ 0.48
SIN3B-201ENST00000248054 KRT222Q8N1A0 295 aa18.05■□□□□ 0.48
SIN3B-201ENST00000248054 CPS1P31327 1500 aa18.05■□□□□ 0.48
SIN3B-201ENST00000248054 TNNT1P13805 278 aa18.05■□□□□ 0.48
SIN3B-201ENST00000248054 RMND1Q9NWS8 449 aa18.05■□□□□ 0.48
SIN3B-201ENST00000248054 DCAF8L1A6NGE4 600 aa18.05■□□□□ 0.48
SIN3B-201ENST00000248054 SPTLC2O15270 562 aa18.05■□□□□ 0.48
SIN3B-201ENST00000248054 GTF2F1P35269 517 aaKnown RBP eCLIP18.05■□□□□ 0.482e-8■■■■■ 34.1
SIN3B-201ENST00000248054 UBA7P41226 1012 aa18.05■□□□□ 0.48
SIN3B-201ENST00000248054 TMCO3Q6UWJ1 677 aa18.05■□□□□ 0.48
SIN3B-201ENST00000248054 RAB11FIP4Q86YS3 637 aa18.05■□□□□ 0.48
SIN3B-201ENST00000248054 FAM200AQ8TCP9 573 aa18.05■□□□□ 0.48
SIN3B-201ENST00000248054 CCDC129Q6ZRS4 1044 aa18.04■□□□□ 0.48
SIN3B-201ENST00000248054 FEZ1Q99689 392 aa18.04■□□□□ 0.48
SIN3B-201ENST00000248054 MTX1Q13505 466 aa18.04■□□□□ 0.48
SIN3B-201ENST00000248054 SYCP1Q15431 976 aa18.04■□□□□ 0.48
SIN3B-201ENST00000248054 TTC6Q86TZ1 520 aa18.04■□□□□ 0.48
SIN3B-201ENST00000248054 SIRT2Q8IXJ6 389 aa18.04■□□□□ 0.48
SIN3B-201ENST00000248054 TANGO6Q9C0B7 1094 aa18.04■□□□□ 0.48
SIN3B-201ENST00000248054 CLIP2Q9UDT6 1046 aa18.04■□□□□ 0.48
SIN3B-201ENST00000248054 USP8P40818 1118 aa18.04■□□□□ 0.48
SIN3B-201ENST00000248054 ZAP70P43403 619 aa18.04■□□□□ 0.48
SIN3B-201ENST00000248054 GGA1Q9UJY5 639 aa18.04■□□□□ 0.48
SIN3B-201ENST00000248054 ZNF397Q8NF99 534 aaPredicted RBP18.03■□□□□ 0.48
SIN3B-201ENST00000248054 PPP1R12BO60237 982 aaPredicted RBP18.03■□□□□ 0.48
SIN3B-201ENST00000248054 KIAA0754O94854 1291 aa18.03■□□□□ 0.48
SIN3B-201ENST00000248054 ARHGAP29Q52LW3 1261 aa18.03■□□□□ 0.48
SIN3B-201ENST00000248054 ARHGEF28Q8N1W1 1705 aaKnown RBP18.03■□□□□ 0.48
SIN3B-201ENST00000248054 GOLGA6L9A6NEM1 432 aa18.03■□□□□ 0.48
SIN3B-201ENST00000248054 TRIM75PA6NK02 468 aa18.03■□□□□ 0.48
SIN3B-201ENST00000248054 ASAP1Q9ULH1 1129 aa18.03■□□□□ 0.48
SIN3B-201ENST00000248054 NCOA3Q9Y6Q9 1424 aa18.03■□□□□ 0.48
SIN3B-201ENST00000248054 CYP27B1O15528 508 aa18.02■□□□□ 0.48
SIN3B-201ENST00000248054 TOP1P11387 765 aaKnown RBP18.02■□□□□ 0.48
SIN3B-201ENST00000248054 C17orf53Q8N3J3 647 aaPredicted RBP18.02■□□□□ 0.48
SIN3B-201ENST00000248054 EIF5P55010 431 aaKnown RBP18.02■□□□□ 0.47
SIN3B-201ENST00000248054 OGFOD1Q8N543 542 aa18.02■□□□□ 0.47
SIN3B-201ENST00000248054 FLAD1Q8NFF5 587 aa18.02■□□□□ 0.47
SIN3B-201ENST00000248054 DACT1Q9NYF0 836 aa18.02■□□□□ 0.47
SIN3B-201ENST00000248054 CRB1P82279 1406 aa18.02■□□□□ 0.47
SIN3B-201ENST00000248054 RPS8P62241 208 aaKnown RBP18.01■□□□□ 0.47
SIN3B-201ENST00000248054 FKBP15Q5T1M5 1219 aa18.01■□□□□ 0.47
SIN3B-201ENST00000248054 IPO4Q8TEX9 1081 aaKnown RBP18.01■□□□□ 0.47
SIN3B-201ENST00000248054 KRT2P35908 639 aa18.01■□□□□ 0.47
SIN3B-201ENST00000248054 C6orf50Q9HD87 102 aa18.01■□□□□ 0.47
SIN3B-201ENST00000248054 ZSWIM6Q9HCJ5 1215 aa18.01■□□□□ 0.47
SIN3B-201ENST00000248054 RGS12O14924 1447 aa18.01■□□□□ 0.47
SIN3B-201ENST00000248054 UFL1O94874 794 aa18.01■□□□□ 0.47
SIN3B-201ENST00000248054 TBC1D22AQ8WUA7 517 aa18.01■□□□□ 0.47
SIN3B-201ENST00000248054 ZNF219Q9P2Y4 722 aaPredicted RBP18.01■□□□□ 0.47
SIN3B-201ENST00000248054 AXIN2Q9Y2T1 843 aa18.01■□□□□ 0.47
SIN3B-201ENST00000248054 POTEB2H3BUK9 544 aa18■□□□□ 0.47
SIN3B-201ENST00000248054 MAP9Q49MG5 647 aa18■□□□□ 0.47
SIN3B-201ENST00000248054 GIMAP6Q6P9H5 292 aa18■□□□□ 0.47
SIN3B-201ENST00000248054 ZNF532Q9HCE3 1301 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms