RNA–Protein interactions for RNA: ENST00000244070.7

PPP4R1L-201, Transcript of protein phosphatase 4 regulatory subunit 1 like (pseudogene), humanhuman

TSL 1 (best) BASIC

Gene PPP4R1L, Length 1,474 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1L-201ENST00000244070 VGLL4Q14135 290 aa14.63□□□□□ -0.07
PPP4R1L-201ENST00000244070 MFSD14BQ5SR56 506 aa14.63□□□□□ -0.07
PPP4R1L-201ENST00000244070 LMBR1LQ6UX01 489 aa14.63□□□□□ -0.07
PPP4R1L-201ENST00000244070 TTF2Q9UNY4 1162 aaKnown RBP14.63□□□□□ -0.07
PPP4R1L-201ENST00000244070 PTCH2Q9Y6C5 1203 aa14.63□□□□□ -0.07
PPP4R1L-201ENST00000244070 COL6A3P12111 3177 aa14.62□□□□□ -0.07
PPP4R1L-201ENST00000244070 GRIK5Q16478 980 aa14.62□□□□□ -0.07
PPP4R1L-201ENST00000244070 BEND3Q5T5X7 828 aa14.62□□□□□ -0.07
PPP4R1L-201ENST00000244070 FAM43AQ8N2R8 423 aa14.62□□□□□ -0.07
PPP4R1L-201ENST00000244070 TDRD7Q8NHU6 1098 aaKnown RBP14.62□□□□□ -0.07
PPP4R1L-201ENST00000244070 TMEM39BQ9GZU3 492 aa14.62□□□□□ -0.07
PPP4R1L-201ENST00000244070 SERPINA10Q9UK55 444 aa14.62□□□□□ -0.07
PPP4R1L-201ENST00000244070 IL16Q14005 1332 aa14.61□□□□□ -0.07
PPP4R1L-201ENST00000244070 CCL15-CCL14A0A0B4J2E2 113 aa14.61□□□□□ -0.07
PPP4R1L-201ENST00000244070 VAMP4O75379 141 aa14.61□□□□□ -0.07
PPP4R1L-201ENST00000244070 GYG1P46976 350 aa14.61□□□□□ -0.07
PPP4R1L-201ENST00000244070 TNFAIP1Q13829 316 aa14.61□□□□□ -0.07
PPP4R1L-201ENST00000244070 TAF1CQ15572 869 aaPredicted RBP14.61□□□□□ -0.07
PPP4R1L-201ENST00000244070 CCL15Q16663 113 aa14.61□□□□□ -0.07
PPP4R1L-201ENST00000244070 LDHAL6AQ6ZMR3 332 aa14.61□□□□□ -0.07
PPP4R1L-201ENST00000244070 DZIP1LQ8IYY4 767 aaKnown RBP14.61□□□□□ -0.07
PPP4R1L-201ENST00000244070 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.61□□□□□ -0.07
PPP4R1L-201ENST00000244070 TCP10L2B9ZVM9 353 aa14.6□□□□□ -0.07
PPP4R1L-201ENST00000244070 CCDC57Q2TAC2 916 aa14.6□□□□□ -0.07
PPP4R1L-201ENST00000244070 SLC9C1Q4G0N8 1177 aa14.6□□□□□ -0.07
PPP4R1L-201ENST00000244070 CNNM1Q9NRU3 951 aa14.6□□□□□ -0.07
PPP4R1L-201ENST00000244070 COLQQ9Y215 455 aaPredicted RBP14.6□□□□□ -0.07
PPP4R1L-201ENST00000244070 MYCP01106 439 aaPredicted RBP14.59□□□□□ -0.07
PPP4R1L-201ENST00000244070 MAP3K9P80192 1104 aa14.59□□□□□ -0.07
PPP4R1L-201ENST00000244070 OTUD5Q96G74 571 aa14.59□□□□□ -0.07
PPP4R1L-201ENST00000244070 FAM84BQ96KN1 310 aaPredicted RBP14.59□□□□□ -0.07
PPP4R1L-201ENST00000244070 TMEM106CQ9BVX2 250 aa14.59□□□□□ -0.07
PPP4R1L-201ENST00000244070 PUS3Q9BZE2 481 aaKnown RBP14.59□□□□□ -0.07
PPP4R1L-201ENST00000244070 ARHGAP39Q9C0H5 1083 aa14.59□□□□□ -0.07
PPP4R1L-201ENST00000244070 ZFYVE28Q9HCC9 887 aa14.59□□□□□ -0.07
PPP4R1L-201ENST00000244070 GRM8O00222 908 aa14.58□□□□□ -0.08
PPP4R1L-201ENST00000244070 HIBADHP31937 336 aaKnown RBP14.58□□□□□ -0.08
PPP4R1L-201ENST00000244070 CRKP46108 304 aa14.58□□□□□ -0.08
PPP4R1L-201ENST00000244070 GTF2A2P52657 109 aa14.58□□□□□ -0.08
PPP4R1L-201ENST00000244070 TAF7LQ5H9L4 462 aa14.58□□□□□ -0.08
PPP4R1L-201ENST00000244070 RNF216Q9NWF9 866 aaPredicted RBP14.58□□□□□ -0.08
PPP4R1L-201ENST00000244070 MYH13Q9UKX3 1938 aa14.58□□□□□ -0.08
PPP4R1L-201ENST00000244070 CACNB3P54284 484 aa14.57□□□□□ -0.08
PPP4R1L-201ENST00000244070 EXOSC9Q06265 439 aaKnown RBP14.57□□□□□ -0.08
PPP4R1L-201ENST00000244070 UBE4AQ14139 1066 aa14.57□□□□□ -0.08
PPP4R1L-201ENST00000244070 SH3TC2Q8TF17 1288 aa14.57□□□□□ -0.08
PPP4R1L-201ENST00000244070 SNCAIPQ9Y6H5 919 aa14.57□□□□□ -0.08
PPP4R1L-201ENST00000244070 SPDYE5A6NIY4 337 aa14.57□□□□□ -0.08
PPP4R1L-201ENST00000244070 SLC4A8Q2Y0W8 1093 aa14.57□□□□□ -0.08
PPP4R1L-201ENST00000244070 NBPF11Q86T75 865 aa14.57□□□□□ -0.08
PPP4R1L-201ENST00000244070 KAZALD1Q96I82 304 aa14.57□□□□□ -0.08
PPP4R1L-201ENST00000244070 IQSEC3Q9UPP2 1182 aaPredicted RBP14.57□□□□□ -0.08
PPP4R1L-201ENST00000244070 CSADQ9Y600 493 aa14.57□□□□□ -0.08
PPP4R1L-201ENST00000244070 BTBD19C9JJ37 291 aa14.56□□□□□ -0.08
PPP4R1L-201ENST00000244070 H0YGN5 161 aa14.56□□□□□ -0.08
PPP4R1L-201ENST00000244070 TLR2O60603 784 aa14.56□□□□□ -0.08
PPP4R1L-201ENST00000244070 AK9Q5TCS8 1911 aa14.55□□□□□ -0.08
PPP4R1L-201ENST00000244070 IRF6O14896 467 aa14.55□□□□□ -0.08
PPP4R1L-201ENST00000244070 MGAMO43451 1857 aa14.55□□□□□ -0.08
PPP4R1L-201ENST00000244070 TNNI2P48788 182 aa14.55□□□□□ -0.08
PPP4R1L-201ENST00000244070 LACTBP83111 547 aaPredicted RBP14.55□□□□□ -0.08
PPP4R1L-201ENST00000244070 ARHGEF6Q15052 776 aa14.55□□□□□ -0.08
PPP4R1L-201ENST00000244070 FBXO33Q7Z6M2 555 aa14.55□□□□□ -0.08
PPP4R1L-201ENST00000244070 CUL9Q8IWT3 2517 aa14.55□□□□□ -0.08
PPP4R1L-201ENST00000244070 ZKSCAN4Q969J2 545 aaPredicted RBP14.55□□□□□ -0.08
PPP4R1L-201ENST00000244070 SUCLG2Q96I99 432 aa14.55□□□□□ -0.08
PPP4R1L-201ENST00000244070 RIPOR2Q9Y4F9 1068 aa14.55□□□□□ -0.08
PPP4R1L-201ENST00000244070 CTGFP29279 349 aa14.54□□□□□ -0.08
PPP4R1L-201ENST00000244070 CHAF1AQ13111 956 aaPredicted RBP14.54□□□□□ -0.08
PPP4R1L-201ENST00000244070 NCBP3Q53F19 620 aaKnown RBP14.54□□□□□ -0.08
PPP4R1L-201ENST00000244070 ERO1BQ86YB8 467 aa14.54□□□□□ -0.08
PPP4R1L-201ENST00000244070 SHISA4Q96DD7 197 aa14.54□□□□□ -0.08
PPP4R1L-201ENST00000244070 WRNIP1Q96S55 665 aa14.54□□□□□ -0.08
PPP4R1L-201ENST00000244070 SPINK5Q9NQ38 1064 aaPredicted RBP14.54□□□□□ -0.08
PPP4R1L-201ENST00000244070 C9orf78Q9NZ63 289 aaPredicted RBP14.54□□□□□ -0.08
PPP4R1L-201ENST00000244070 ECM2O94769 699 aaPredicted RBP14.53□□□□□ -0.08
PPP4R1L-201ENST00000244070 CETPP11597 493 aa14.53□□□□□ -0.08
PPP4R1L-201ENST00000244070 HDLBPQ00341 1268 aaKnown RBP14.53□□□□□ -0.08
PPP4R1L-201ENST00000244070 ZCCHC17Q9NP64 241 aaKnown RBP14.53□□□□□ -0.08
PPP4R1L-201ENST00000244070 SALL2Q9Y467 1007 aaPredicted RBP14.53□□□□□ -0.08
PPP4R1L-201ENST00000244070 NBPF7P0C2Y1 421 aaPredicted RBP14.52□□□□□ -0.08
PPP4R1L-201ENST00000244070 PPIL2Q13356 520 aa14.52□□□□□ -0.08
PPP4R1L-201ENST00000244070 SNAPC2Q13487 334 aa14.52□□□□□ -0.08
PPP4R1L-201ENST00000244070 MTFR1Q15390 333 aa14.52□□□□□ -0.08
PPP4R1L-201ENST00000244070 APOBEC3HQ6NTF7 200 aaKnown RBP14.52□□□□□ -0.08
PPP4R1L-201ENST00000244070 TEKT1Q969V4 418 aa14.52□□□□□ -0.08
PPP4R1L-201ENST00000244070 MROH5Q6ZUA9 1318 aa14.51□□□□□ -0.09
PPP4R1L-201ENST00000244070 ALDH1L1O75891 902 aa14.51□□□□□ -0.09
PPP4R1L-201ENST00000244070 LRRC24Q50LG9 513 aa14.51□□□□□ -0.09
PPP4R1L-201ENST00000244070 SLC4A10Q6U841 1118 aa14.51□□□□□ -0.09
PPP4R1L-201ENST00000244070 C17orf99Q6UX52 265 aa14.51□□□□□ -0.09
PPP4R1L-201ENST00000244070 FAM83AQ86UY5 434 aa14.51□□□□□ -0.09
PPP4R1L-201ENST00000244070 WDR63Q8IWG1 891 aa14.51□□□□□ -0.09
PPP4R1L-201ENST00000244070 VGLL2Q8N8G2 317 aa14.51□□□□□ -0.09
PPP4R1L-201ENST00000244070 ZDHHC15Q96MV8 337 aa14.51□□□□□ -0.09
PPP4R1L-201ENST00000244070 RPAP1Q9BWH6 1393 aaPredicted RBP14.51□□□□□ -0.09
PPP4R1L-201ENST00000244070 ADGRA2Q96PE1 1338 aa14.51□□□□□ -0.09
PPP4R1L-201ENST00000244070 KIF22Q14807 665 aa14.5□□□□□ -0.09
PPP4R1L-201ENST00000244070 CHRDL2Q6WN34 429 aa14.5□□□□□ -0.09
PPP4R1L-201ENST00000244070 VPS37DQ86XT2 251 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms