RNA–Protein interactions for RNA: ENST00000238628.10

IFT43-201, Transcript of intraflagellar transport 43, humanhuman

TSL 1 (best) BASIC

Gene IFT43, Length 816 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43-201ENST00000238628 MBIPQ9NS73 344 aa10.74□□□□□ -0.69
IFT43-201ENST00000238628 CWC25Q9NXE8 425 aaPredicted RBP10.74□□□□□ -0.69
IFT43-201ENST00000238628 SPTBN5Q9NRC6 3674 aaKnown RBP10.73□□□□□ -0.69
IFT43-201ENST00000238628 WDR43Q15061 677 aaKnown RBP eCLIP10.73□□□□□ -0.69
IFT43-201ENST00000238628 TJAP1Q5JTD0 557 aa10.73□□□□□ -0.69
IFT43-201ENST00000238628 SLAIN1Q8ND83 568 aa10.73□□□□□ -0.69
IFT43-201ENST00000238628 ZBED3Q96IU2 234 aaPredicted RBP10.73□□□□□ -0.69
IFT43-201ENST00000238628 CPA4Q9UI42 421 aa10.73□□□□□ -0.69
IFT43-201ENST00000238628 MYO1BO43795 1136 aa10.72□□□□□ -0.69
IFT43-201ENST00000238628 TTLL5Q6EMB2 1281 aa10.72□□□□□ -0.69
IFT43-201ENST00000238628 DIS3LQ8TF46 1054 aaKnown RBP10.72□□□□□ -0.69
IFT43-201ENST00000238628 CDC5LQ99459 802 aaKnown RBP10.72□□□□□ -0.69
IFT43-201ENST00000238628 METTL22Q9BUU2 404 aaPredicted RBP10.72□□□□□ -0.69
IFT43-201ENST00000238628 VEZTQ9HBM0 779 aa10.72□□□□□ -0.69
IFT43-201ENST00000238628 MINPP1Q9UNW1 487 aa10.72□□□□□ -0.69
IFT43-201ENST00000238628 ADAMTS8Q9UP79 889 aa10.72□□□□□ -0.69
IFT43-201ENST00000238628 ALPK3Q96L96 1907 aa10.72□□□□□ -0.69
IFT43-201ENST00000238628 CLRN2A0PK11 232 aa10.71□□□□□ -0.69
IFT43-201ENST00000238628 ZNF804BA4D1E1 1349 aa10.71□□□□□ -0.69
IFT43-201ENST00000238628 BTBD19C9JJ37 291 aa10.71□□□□□ -0.69
IFT43-201ENST00000238628 DDX58O95786 925 aaKnown RBP10.71□□□□□ -0.69
IFT43-201ENST00000238628 MYH3P11055 1940 aa10.71□□□□□ -0.69
IFT43-201ENST00000238628 CETPP11597 493 aa10.71□□□□□ -0.69
IFT43-201ENST00000238628 CCT4P50991 539 aaKnown RBP10.71□□□□□ -0.69
IFT43-201ENST00000238628 PRKCZQ05513 592 aa10.71□□□□□ -0.69
IFT43-201ENST00000238628 C17orf99Q6UX52 265 aa10.71□□□□□ -0.69
IFT43-201ENST00000238628 FAM205AQ6ZU69 1335 aa10.71□□□□□ -0.69
IFT43-201ENST00000238628 SPEF2Q9C093 1822 aa10.71□□□□□ -0.69
IFT43-201ENST00000238628 ZCCHC17Q9NP64 241 aaKnown RBP10.71□□□□□ -0.69
IFT43-201ENST00000238628 BSDC1Q9NW68 430 aaPredicted RBP10.71□□□□□ -0.69
IFT43-201ENST00000238628 MED23Q9ULK4 1368 aa10.7□□□□□ -0.7
IFT43-201ENST00000238628 MYBBP1AQ9BQG0 1328 aaKnown RBP10.7□□□□□ -0.7
IFT43-201ENST00000238628 ADCY3O60266 1144 aa10.7□□□□□ -0.7
IFT43-201ENST00000238628 ZNF853P0CG23 659 aa10.7□□□□□ -0.7
IFT43-201ENST00000238628 GNAI1P63096 354 aa10.7□□□□□ -0.7
IFT43-201ENST00000238628 RASA3Q14644 834 aa10.7□□□□□ -0.7
IFT43-201ENST00000238628 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.7□□□□□ -0.7
IFT43-201ENST00000238628 TTLL11Q8NHH1 800 aa10.7□□□□□ -0.7
IFT43-201ENST00000238628 MYLIPQ8WY64 445 aa10.7□□□□□ -0.7
IFT43-201ENST00000238628 SNX27Q96L92 541 aa10.7□□□□□ -0.7
IFT43-201ENST00000238628 COA1Q9GZY4 146 aa10.7□□□□□ -0.7
IFT43-201ENST00000238628 MAP3K2Q9Y2U5 619 aa10.7□□□□□ -0.7
IFT43-201ENST00000238628 CSADQ9Y600 493 aa10.7□□□□□ -0.7
IFT43-201ENST00000238628 INHAP05111 366 aa10.69□□□□□ -0.7
IFT43-201ENST00000238628 FCGRTP55899 365 aa10.69□□□□□ -0.7
IFT43-201ENST00000238628 CTSWP56202 376 aa10.69□□□□□ -0.7
IFT43-201ENST00000238628 MAP3K9P80192 1104 aa10.69□□□□□ -0.7
IFT43-201ENST00000238628 MDM2Q00987 491 aaPredicted RBP10.69□□□□□ -0.7
IFT43-201ENST00000238628 VGLL4Q14135 290 aa10.69□□□□□ -0.7
IFT43-201ENST00000238628 CCDC30Q5VVM6 783 aa10.69□□□□□ -0.7
IFT43-201ENST00000238628 CHMP4AQ9BY43 222 aa10.69□□□□□ -0.7
IFT43-201ENST00000238628 CRISPLD2Q9H0B8 497 aa10.69□□□□□ -0.7
IFT43-201ENST00000238628 GREM2Q9H772 168 aa10.69□□□□□ -0.7
IFT43-201ENST00000238628 IFT57Q9NWB7 429 aa10.69□□□□□ -0.7
IFT43-201ENST00000238628 LEMD3Q9Y2U8 911 aa10.69□□□□□ -0.7
IFT43-201ENST00000238628 SYNGAP1Q96PV0 1343 aa10.68□□□□□ -0.7
IFT43-201ENST00000238628 FOSL2P15408 326 aa10.68□□□□□ -0.7
IFT43-201ENST00000238628 ELNP15502 786 aa10.68□□□□□ -0.7
IFT43-201ENST00000238628 DSG3P32926 999 aa10.68□□□□□ -0.7
IFT43-201ENST00000238628 IGHMBP2P38935 993 aaKnown RBP10.68□□□□□ -0.7
IFT43-201ENST00000238628 GTF2IP78347 998 aa10.68□□□□□ -0.7
IFT43-201ENST00000238628 CALD1Q05682 793 aaKnown RBP10.68□□□□□ -0.7
IFT43-201ENST00000238628 NEXNQ0ZGT2 675 aa10.68□□□□□ -0.7
IFT43-201ENST00000238628 SNAPC2Q13487 334 aa10.68□□□□□ -0.7
IFT43-201ENST00000238628 KSR2Q6VAB6 950 aa10.68□□□□□ -0.7
IFT43-201ENST00000238628 TXNRD3Q86VQ6 643 aa10.68□□□□□ -0.7
IFT43-201ENST00000238628 C8orf58Q8NAV2 365 aa10.68□□□□□ -0.7
IFT43-201ENST00000238628 NBPF3Q9H094 633 aa10.68□□□□□ -0.7
IFT43-201ENST00000238628 SEMA6BQ9H3T3 888 aa10.68□□□□□ -0.7
IFT43-201ENST00000238628 PAK6Q9NQU5 681 aaPredicted RBP10.68□□□□□ -0.7
IFT43-201ENST00000238628 GABRQQ9UN88 632 aa10.68□□□□□ -0.7
IFT43-201ENST00000238628 PCDHAC2Q9Y5I4 1007 aa10.68□□□□□ -0.7
IFT43-201ENST00000238628 ADGRA2Q96PE1 1338 aa10.67□□□□□ -0.7
IFT43-201ENST00000238628 PI4KAP2A4QPH2 592 aa10.67□□□□□ -0.7
IFT43-201ENST00000238628 IGKV5-2P06315 115 aa10.67□□□□□ -0.7
IFT43-201ENST00000238628 DDX10Q13206 875 aaKnown RBP10.67□□□□□ -0.7
IFT43-201ENST00000238628 PI4KAP1Q8N8J0 262 aa10.67□□□□□ -0.7
IFT43-201ENST00000238628 ANKLE1Q8NAG6 615 aa10.67□□□□□ -0.7
IFT43-201ENST00000238628 MTMR14Q8NCE2 650 aa10.67□□□□□ -0.7
IFT43-201ENST00000238628 ANKRD2Q9GZV1 360 aa10.67□□□□□ -0.7
IFT43-201ENST00000238628 C11orf49Q9H6J7 331 aa10.67□□□□□ -0.7
IFT43-201ENST00000238628 SPDYE5A6NIY4 337 aa10.66□□□□□ -0.7
IFT43-201ENST00000238628 F8W031 263 aaPredicted RBP10.66□□□□□ -0.7
IFT43-201ENST00000238628 APAF1O14727 1248 aa10.66□□□□□ -0.7
IFT43-201ENST00000238628 IRF6O14896 467 aa10.66□□□□□ -0.7
IFT43-201ENST00000238628 CWF19L2Q2TBE0 894 aaKnown RBP10.66□□□□□ -0.7
IFT43-201ENST00000238628 CFAP100Q494V2 611 aa10.66□□□□□ -0.7
IFT43-201ENST00000238628 PXYLP1Q8TE99 480 aa10.66□□□□□ -0.7
IFT43-201ENST00000238628 PRMT6Q96LA8 375 aaPredicted RBP10.66□□□□□ -0.7
IFT43-201ENST00000238628 MPHOSPH8Q99549 860 aa10.66□□□□□ -0.7
IFT43-201ENST00000238628 TAOK2Q9UL54 1235 aa10.66□□□□□ -0.7
IFT43-201ENST00000238628 OTOFQ9HC10 1997 aa10.65□□□□□ -0.7
IFT43-201ENST00000238628 SPDYE2BA6NHP3 402 aa10.65□□□□□ -0.7
IFT43-201ENST00000238628 H7C1W4 665 aa10.65□□□□□ -0.7
IFT43-201ENST00000238628 PDHXO00330 501 aa10.65□□□□□ -0.7
IFT43-201ENST00000238628 SPDYE6P0CI01 402 aa10.65□□□□□ -0.7
IFT43-201ENST00000238628 KLRK1P26718 216 aa10.65□□□□□ -0.7
IFT43-201ENST00000238628 KCNJ4P48050 445 aa10.65□□□□□ -0.7
IFT43-201ENST00000238628 FLT3LGP49771 235 aa10.65□□□□□ -0.7
IFT43-201ENST00000238628 RBM5P52756 815 aaKnown RBP eCLIP10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms