RNA–Protein interactions for RNA: ENST00000238497.9

VPS4B-201, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS4B, Length 3,324 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-201ENST00000238497 WDR90Q96KV7 1748 aa10.4□□□□□ -0.74
VPS4B-201ENST00000238497 ADM5C9JUS6 153 aa10.4□□□□□ -0.74
VPS4B-201ENST00000238497 KIF1BPQ96EK5 621 aa10.4□□□□□ -0.74
VPS4B-201ENST00000238497 CD209Q9NNX6 404 aa10.4□□□□□ -0.74
VPS4B-201ENST00000238497 ASTN2O75129 1339 aaPredicted RBP10.4□□□□□ -0.74
VPS4B-201ENST00000238497 SASH1O94885 1247 aa10.4□□□□□ -0.75
VPS4B-201ENST00000238497 ANGEL2Q5VTE6 544 aaKnown RBP10.4□□□□□ -0.75
VPS4B-201ENST00000238497 EDC3Q96F86 508 aaKnown RBP10.4□□□□□ -0.75
VPS4B-201ENST00000238497 KAZALD1Q96I82 304 aa10.4□□□□□ -0.75
VPS4B-201ENST00000238497 DNAJC2Q99543 621 aaKnown RBP10.4□□□□□ -0.75
VPS4B-201ENST00000238497 KIF2CQ99661 725 aa10.4□□□□□ -0.75
VPS4B-201ENST00000238497 ANTXR1Q9H6X2 564 aa10.4□□□□□ -0.75
VPS4B-201ENST00000238497 HDAC9Q9UKV0 1011 aa10.4□□□□□ -0.75
VPS4B-201ENST00000238497 NAP1L2Q9ULW6 460 aaPredicted RBP10.4□□□□□ -0.75
VPS4B-201ENST00000238497 MED23Q9ULK4 1368 aa10.39□□□□□ -0.75
VPS4B-201ENST00000238497 PKP1Q13835 747 aa10.39□□□□□ -0.75
VPS4B-201ENST00000238497 SCARF1Q14162 830 aa10.39□□□□□ -0.75
VPS4B-201ENST00000238497 PRAMEF18Q5VWM3 479 aa10.39□□□□□ -0.75
VPS4B-201ENST00000238497 PALD1Q9ULE6 856 aa10.39□□□□□ -0.75
VPS4B-201ENST00000238497 PRKG1Q13976 671 aa10.39□□□□□ -0.75
VPS4B-201ENST00000238497 RABEP1Q15276 862 aa10.39□□□□□ -0.75
VPS4B-201ENST00000238497 AGBL3Q8NEM8 1001 aa10.39□□□□□ -0.75
VPS4B-201ENST00000238497 MYOZ2Q9NPC6 264 aa10.39□□□□□ -0.75
VPS4B-201ENST00000238497 CYP4F22Q6NT55 531 aa10.38□□□□□ -0.75
VPS4B-201ENST00000238497 TCEANC2Q96MN5 208 aa10.38□□□□□ -0.75
VPS4B-201ENST00000238497 HDAC5Q9UQL6 1122 aa10.38□□□□□ -0.75
VPS4B-201ENST00000238497 DUOX1Q9NRD9 1551 aa10.38□□□□□ -0.75
VPS4B-201ENST00000238497 GOLGA6L22H0YM25 854 aa10.38□□□□□ -0.75
VPS4B-201ENST00000238497 HSPA1AP0DMV8 641 aaKnown RBP10.38□□□□□ -0.75
VPS4B-201ENST00000238497 HSPA1BP0DMV9 641 aaKnown RBP10.38□□□□□ -0.75
VPS4B-201ENST00000238497 CHMLP26374 656 aa10.38□□□□□ -0.75
VPS4B-201ENST00000238497 HIBADHP31937 336 aaKnown RBP10.38□□□□□ -0.75
VPS4B-201ENST00000238497 VEGFBP49765 207 aa10.38□□□□□ -0.75
VPS4B-201ENST00000238497 STRIP1Q5VSL9 837 aa10.38□□□□□ -0.75
VPS4B-201ENST00000238497 AIDAQ96BJ3 306 aa10.38□□□□□ -0.75
VPS4B-201ENST00000238497 GBP4Q96PP9 640 aa10.38□□□□□ -0.75
VPS4B-201ENST00000238497 ESYT1Q9BSJ8 1104 aa10.38□□□□□ -0.75
VPS4B-201ENST00000238497 BEGAINQ9BUH8 593 aa10.38□□□□□ -0.75
VPS4B-201ENST00000238497 DDX49Q9Y6V7 483 aaKnown RBP10.38□□□□□ -0.75
VPS4B-201ENST00000238497 CACNA1FO60840 1977 aa10.38□□□□□ -0.75
VPS4B-201ENST00000238497 PASKQ96RG2 1323 aa10.38□□□□□ -0.75
VPS4B-201ENST00000238497 HUNKP57058 714 aa10.38□□□□□ -0.75
VPS4B-201ENST00000238497 NBPF9Q3BBW0 867 aa10.38□□□□□ -0.75
VPS4B-201ENST00000238497 CAVIN4Q5BKX8 364 aa10.38□□□□□ -0.75
VPS4B-201ENST00000238497 ZC3H15Q8WU90 426 aaKnown RBP10.38□□□□□ -0.75
VPS4B-201ENST00000238497 DACT2Q5SW24 774 aa10.37□□□□□ -0.75
VPS4B-201ENST00000238497 FSD1Q9BTV5 496 aa10.37□□□□□ -0.75
VPS4B-201ENST00000238497 IL25Q9H293 177 aa10.37□□□□□ -0.75
VPS4B-201ENST00000238497 VEZTQ9HBM0 779 aa10.37□□□□□ -0.75
VPS4B-201ENST00000238497 SCN4AP35499 1836 aa10.37□□□□□ -0.75
VPS4B-201ENST00000238497 CEP126Q9P2H0 1117 aa10.37□□□□□ -0.75
VPS4B-201ENST00000238497 IFIT1P09914 478 aaKnown RBP10.36□□□□□ -0.75
VPS4B-201ENST00000238497 DLGAP5Q15398 846 aa10.36□□□□□ -0.75
VPS4B-201ENST00000238497 SSH3Q8TE77 659 aa10.36□□□□□ -0.75
VPS4B-201ENST00000238497 GPATCH3Q96I76 525 aa10.36□□□□□ -0.75
VPS4B-201ENST00000238497 MROH5Q6ZUA9 1318 aa10.36□□□□□ -0.75
VPS4B-201ENST00000238497 PPFIA3O75145 1194 aa10.36□□□□□ -0.75
VPS4B-201ENST00000238497 UBE4AQ14139 1066 aa10.36□□□□□ -0.75
VPS4B-201ENST00000238497 MFSD14BQ5SR56 506 aa10.36□□□□□ -0.75
VPS4B-201ENST00000238497 CST9Q5W186 159 aa10.36□□□□□ -0.75
VPS4B-201ENST00000238497 C2orf69Q8N8R5 385 aa10.36□□□□□ -0.75
VPS4B-201ENST00000238497 CAPNS2Q96L46 248 aa10.36□□□□□ -0.75
VPS4B-201ENST00000238497 TLR7Q9NYK1 1049 aaKnown RBP10.36□□□□□ -0.75
VPS4B-201ENST00000238497 CLRN2A0PK11 232 aa10.36□□□□□ -0.75
VPS4B-201ENST00000238497 GOLGA6L3A6NEY3 463 aa10.35□□□□□ -0.75
VPS4B-201ENST00000238497 EYA2O00167 538 aa10.35□□□□□ -0.75
VPS4B-201ENST00000238497 PRPF40AO75400 957 aaKnown RBP10.35□□□□□ -0.75
VPS4B-201ENST00000238497 ECE1P42892 770 aa10.35□□□□□ -0.75
VPS4B-201ENST00000238497 BCAMP50895 628 aa10.35□□□□□ -0.75
VPS4B-201ENST00000238497 HSP90AB4PQ58FF6 505 aa10.35□□□□□ -0.75
VPS4B-201ENST00000238497 GORABQ5T7V8 394 aa10.35□□□□□ -0.75
VPS4B-201ENST00000238497 GDPD2Q9HCC8 539 aa10.35□□□□□ -0.75
VPS4B-201ENST00000238497 RIPOR2Q9Y4F9 1068 aa10.35□□□□□ -0.75
VPS4B-201ENST00000238497 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.35□□□□□ -0.75
VPS4B-201ENST00000238497 MYO3BQ8WXR4 1341 aa10.35□□□□□ -0.75
VPS4B-201ENST00000238497 PDE8BO95263 885 aa10.35□□□□□ -0.75
VPS4B-201ENST00000238497 FGD1P98174 961 aa10.35□□□□□ -0.75
VPS4B-201ENST00000238497 RABL6Q3YEC7 729 aaPredicted RBP10.35□□□□□ -0.75
VPS4B-201ENST00000238497 GBA2Q9HCG7 927 aaPredicted RBP10.35□□□□□ -0.75
VPS4B-201ENST00000238497 TTF2Q9UNY4 1162 aaKnown RBP10.35□□□□□ -0.75
VPS4B-201ENST00000238497 FAM84BQ96KN1 310 aaPredicted RBP10.35□□□□□ -0.75
VPS4B-201ENST00000238497 MYH3P11055 1940 aa10.34□□□□□ -0.75
VPS4B-201ENST00000238497 UTYO14607 1347 aa10.34□□□□□ -0.75
VPS4B-201ENST00000238497 WDR33Q9C0J8 1336 aaKnown RBP10.34□□□□□ -0.75
VPS4B-201ENST00000238497 WNT10BO00744 389 aa10.34□□□□□ -0.75
VPS4B-201ENST00000238497 MYO1BO43795 1136 aa10.34□□□□□ -0.75
VPS4B-201ENST00000238497 AOC2O75106 756 aa10.34□□□□□ -0.75
VPS4B-201ENST00000238497 RAB11FIP3O75154 756 aa10.34□□□□□ -0.75
VPS4B-201ENST00000238497 CAPN15O75808 1086 aa10.34□□□□□ -0.75
VPS4B-201ENST00000238497 SLC5A1P13866 664 aa10.34□□□□□ -0.75
VPS4B-201ENST00000238497 FOSBP53539 338 aa10.34□□□□□ -0.75
VPS4B-201ENST00000238497 EAF2Q96CJ1 260 aaPredicted RBP10.34□□□□□ -0.75
VPS4B-201ENST00000238497 CNTNAP1P78357 1384 aa10.34□□□□□ -0.75
VPS4B-201ENST00000238497 SPEF2Q9C093 1822 aa10.34□□□□□ -0.75
VPS4B-201ENST00000238497 CHGBP05060 677 aa10.34□□□□□ -0.75
VPS4B-201ENST00000238497 NF2P35240 595 aa10.34□□□□□ -0.75
VPS4B-201ENST00000238497 TSKSQ9UJT2 592 aa10.34□□□□□ -0.75
VPS4B-201ENST00000238497 LTBP1Q14766 1721 aa10.34□□□□□ -0.75
VPS4B-201ENST00000238497 ZNF157P51786 506 aaPredicted RBP10.33□□□□□ -0.76
VPS4B-201ENST00000238497 TIMM10P62072 90 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms