RNA–Protein interactions for RNA: ENST00000236671.6

CTSD-201, Transcript of cathepsin D, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CTSD, Length 2,123 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-201ENST00000236671 TNNT1P13805 278 aa18.13■□□□□ 0.49
CTSD-201ENST00000236671 LRRC4BQ9NT99 713 aa18.13■□□□□ 0.49
CTSD-201ENST00000236671 ANO10Q9NW15 660 aa18.13■□□□□ 0.49
CTSD-201ENST00000236671 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.13■□□□□ 0.49
CTSD-201ENST00000236671 ARID5BQ14865 1188 aa18.13■□□□□ 0.49
CTSD-201ENST00000236671 SMIM5Q71RC9 77 aa18.13■□□□□ 0.49
CTSD-201ENST00000236671 FMR1NBQ8N0W7 255 aaPredicted RBP18.13■□□□□ 0.49
CTSD-201ENST00000236671 CHMP4CQ96CF2 233 aa18.13■□□□□ 0.49
CTSD-201ENST00000236671 ZBTB3Q9H5J0 574 aa18.13■□□□□ 0.49
CTSD-201ENST00000236671 GPHNQ9NQX3 736 aaPredicted RBP18.13■□□□□ 0.49
CTSD-201ENST00000236671 RTEL1Q9NZ71 1219 aa18.13■□□□□ 0.49
CTSD-201ENST00000236671 LY75O60449 1722 aa18.13■□□□□ 0.49
CTSD-201ENST00000236671 A1BGP04217 495 aa18.12■□□□□ 0.49
CTSD-201ENST00000236671 PCDHA7Q9UN72 937 aa18.12■□□□□ 0.49
CTSD-201ENST00000236671 BECN2A8MW95 431 aa18.11■□□□□ 0.49
CTSD-201ENST00000236671 NEMFO60524 1076 aa18.11■□□□□ 0.49
CTSD-201ENST00000236671 NCBP1Q09161 790 aaKnown RBP18.11■□□□□ 0.49
CTSD-201ENST00000236671 ATP2B3Q16720 1220 aa18.11■□□□□ 0.49
CTSD-201ENST00000236671 MRPS27Q92552 414 aaKnown RBP18.11■□□□□ 0.49
CTSD-201ENST00000236671 DDX60Q8IY21 1712 aaKnown RBP18.11■□□□□ 0.49
CTSD-201ENST00000236671 TPD52L1Q16890 204 aaPredicted RBP18.11■□□□□ 0.49
CTSD-201ENST00000236671 CEP57L1Q8IYX8 460 aa18.11■□□□□ 0.49
CTSD-201ENST00000236671 PRDM4Q9UKN5 801 aa18.11■□□□□ 0.49
CTSD-201ENST00000236671 A0A1W2PQ27 194 aa18.1■□□□□ 0.49
CTSD-201ENST00000236671 A0A1W2PQ64 194 aa18.1■□□□□ 0.49
CTSD-201ENST00000236671 A0A1W2PQD8 194 aa18.1■□□□□ 0.49
CTSD-201ENST00000236671 FKBP4Q02790 459 aaKnown RBP eCLIP18.1■□□□□ 0.49
CTSD-201ENST00000236671 SYCP1Q15431 976 aa18.1■□□□□ 0.49
CTSD-201ENST00000236671 ADALQ6DHV7 355 aa18.1■□□□□ 0.49
CTSD-201ENST00000236671 ERCC4Q92889 916 aaPredicted RBP18.1■□□□□ 0.49
CTSD-201ENST00000236671 PAXBP1Q9Y5B6 917 aa18.1■□□□□ 0.49
CTSD-201ENST00000236671 ADORA1P30542 326 aa18.1■□□□□ 0.49
CTSD-201ENST00000236671 LINC00301Q8NCQ3 95 aa18.1■□□□□ 0.49
CTSD-201ENST00000236671 CEP126Q9P2H0 1117 aa18.1■□□□□ 0.49
CTSD-201ENST00000236671 CTNNA3Q9UI47 895 aa18.1■□□□□ 0.49
CTSD-201ENST00000236671 NEDD4P46934 1319 aa18.09■□□□□ 0.49
CTSD-201ENST00000236671 HAND2P61296 217 aa18.09■□□□□ 0.49
CTSD-201ENST00000236671 OTUD7BQ6GQQ9 843 aa18.09■□□□□ 0.49
CTSD-201ENST00000236671 MB21D2Q8IYB1 491 aaPredicted RBP18.09■□□□□ 0.49
CTSD-201ENST00000236671 AOPEPQ8N6M6 819 aa18.09■□□□□ 0.49
CTSD-201ENST00000236671 PRDM10Q9NQV6 1147 aa18.09■□□□□ 0.49
CTSD-201ENST00000236671 HPS5Q9UPZ3 1129 aa18.09■□□□□ 0.49
CTSD-201ENST00000236671 MYH14Q7Z406 1995 aaKnown RBP18.09■□□□□ 0.49
CTSD-201ENST00000236671 A0A1B0GVL5 298 aa18.08■□□□□ 0.49
CTSD-201ENST00000236671 USP27XA6NNY8 438 aa18.08■□□□□ 0.49
CTSD-201ENST00000236671 NDUFA8P51970 172 aa18.08■□□□□ 0.49
CTSD-201ENST00000236671 CCZ1BP86790 482 aa18.08■□□□□ 0.49
CTSD-201ENST00000236671 CCZ1P86791 482 aaPredicted RBP18.08■□□□□ 0.49
CTSD-201ENST00000236671 SF3B2Q13435 895 aaKnown RBP18.08■□□□□ 0.49
CTSD-201ENST00000236671 ITPK1Q13572 414 aa18.08■□□□□ 0.49
CTSD-201ENST00000236671 IMMTQ16891 758 aaKnown RBP18.08■□□□□ 0.49
CTSD-201ENST00000236671 CLIC4Q9Y696 253 aa18.08■□□□□ 0.49
CTSD-201ENST00000236671 TAF1LQ8IZX4 1826 aa18.08■□□□□ 0.49
CTSD-201ENST00000236671 LOC102724428A0A0B4J2F2 783 aa18.08■□□□□ 0.48
CTSD-201ENST00000236671 CCDC69A6NI79 296 aa18.08■□□□□ 0.48
CTSD-201ENST00000236671 PRC1O43663 620 aa18.08■□□□□ 0.48
CTSD-201ENST00000236671 ZFYP08048 801 aaPredicted RBP18.08■□□□□ 0.48
CTSD-201ENST00000236671 SIK1P57059 783 aa18.08■□□□□ 0.48
CTSD-201ENST00000236671 TXNRD1Q16881 649 aa18.08■□□□□ 0.48
CTSD-201ENST00000236671 LRRFIP1Q32MZ4 808 aaKnown RBP18.08■□□□□ 0.48
CTSD-201ENST00000236671 CCDC158Q5M9N0 1113 aa18.08■□□□□ 0.48
CTSD-201ENST00000236671 TTC39AQ5SRH9 613 aa18.08■□□□□ 0.48
CTSD-201ENST00000236671 XAGE2Q96GT9 111 aa18.08■□□□□ 0.48
CTSD-201ENST00000236671 C8orf76Q96K31 380 aa18.08■□□□□ 0.48
CTSD-201ENST00000236671 CAMKK2Q96RR4 588 aa18.08■□□□□ 0.48
CTSD-201ENST00000236671 ISCA1Q9BUE6 129 aa18.08■□□□□ 0.48
CTSD-201ENST00000236671 NAT10Q9H0A0 1025 aaKnown RBP18.08■□□□□ 0.48
CTSD-201ENST00000236671 POLR3EQ9NVU0 708 aa18.08■□□□□ 0.48
CTSD-201ENST00000236671 GOLGA8BA8MQT2 603 aa18.07■□□□□ 0.48
CTSD-201ENST00000236671 FGAP02671 866 aa18.07■□□□□ 0.48
CTSD-201ENST00000236671 SKILP12757 684 aa18.07■□□□□ 0.48
CTSD-201ENST00000236671 ANTXR2P58335 489 aa18.07■□□□□ 0.48
CTSD-201ENST00000236671 CBX1P83916 185 aa18.07■□□□□ 0.48
CTSD-201ENST00000236671 SCARF1Q14162 830 aa18.07■□□□□ 0.48
CTSD-201ENST00000236671 WASHC4Q2M389 1173 aa18.07■□□□□ 0.48
CTSD-201ENST00000236671 CCDC112Q8NEF3 446 aa18.07■□□□□ 0.48
CTSD-201ENST00000236671 FBXO18Q8NFZ0 1043 aa18.07■□□□□ 0.48
CTSD-201ENST00000236671 KCNG4Q8TDN1 519 aa18.07■□□□□ 0.48
CTSD-201ENST00000236671 KLF18A0A0U1RQI7 1052 aa18.07■□□□□ 0.48
CTSD-201ENST00000236671 YEATS4O95619 227 aa18.07■□□□□ 0.48
CTSD-201ENST00000236671 ATP6V1AP38606 617 aa18.07■□□□□ 0.48
CTSD-201ENST00000236671 CEP135Q66GS9 1140 aa18.07■□□□□ 0.48
CTSD-201ENST00000236671 NYAP1Q6ZVC0 841 aa18.07■□□□□ 0.48
CTSD-201ENST00000236671 FILIP1Q7Z7B0 1213 aa18.07■□□□□ 0.48
CTSD-201ENST00000236671 AMIGO3Q86WK7 504 aa18.07■□□□□ 0.48
CTSD-201ENST00000236671 SDF4Q9BRK5 362 aa18.07■□□□□ 0.48
CTSD-201ENST00000236671 CCNL1Q9UK58 526 aaPredicted RBP18.07■□□□□ 0.48
CTSD-201ENST00000236671 ZSCAN20P17040 1043 aaPredicted RBP18.06■□□□□ 0.48
CTSD-201ENST00000236671 STK38Q15208 465 aa18.06■□□□□ 0.48
CTSD-201ENST00000236671 CCDC57Q2TAC2 916 aa18.06■□□□□ 0.48
CTSD-201ENST00000236671 NBPF11Q86T75 865 aa18.06■□□□□ 0.48
CTSD-201ENST00000236671 APPBP2Q92624 585 aa18.06■□□□□ 0.48
CTSD-201ENST00000236671 FBXO3Q9UK99 471 aa18.06■□□□□ 0.48
CTSD-201ENST00000236671 AKAP2Q9Y2D5 859 aa18.06■□□□□ 0.48
CTSD-201ENST00000236671 DHX16O60231 1041 aaKnown RBP18.05■□□□□ 0.48
CTSD-201ENST00000236671 POLR3DP05423 398 aaPredicted RBP18.05■□□□□ 0.48
CTSD-201ENST00000236671 U2AF2P26368 475 aaKnown RBP eCLIP18.05■□□□□ 0.48
CTSD-201ENST00000236671 DPCR1Q3MIW9 517 aa18.05■□□□□ 0.48
CTSD-201ENST00000236671 GORABQ5T7V8 394 aa18.05■□□□□ 0.48
CTSD-201ENST00000236671 MYSM1Q5VVJ2 828 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms