RNA–Protein interactions for RNA: ENST00000223084.7

LSM5-201, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 1,295 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-201ENST00000223084 PI16Q6UXB8 463 aa15.61■□□□□ 0.09
LSM5-201ENST00000223084 TNS4Q8IZW8 715 aa15.61■□□□□ 0.09
LSM5-201ENST00000223084 MTMR14Q8NCE2 650 aa15.61■□□□□ 0.09
LSM5-201ENST00000223084 RHPN1Q8TCX5 695 aa15.61■□□□□ 0.09
LSM5-201ENST00000223084 EAF2Q96CJ1 260 aaPredicted RBP15.61■□□□□ 0.09
LSM5-201ENST00000223084 BCL11AQ9H165 835 aa15.61■□□□□ 0.09
LSM5-201ENST00000223084 TLR7Q9NYK1 1049 aaKnown RBP15.61■□□□□ 0.09
LSM5-201ENST00000223084 SUPT16HQ9Y5B9 1047 aaKnown RBP15.61■□□□□ 0.09
LSM5-201ENST00000223084 CLRN2A0PK11 232 aa15.6■□□□□ 0.09
LSM5-201ENST00000223084 PRDX5P30044 214 aa15.6■□□□□ 0.09
LSM5-201ENST00000223084 HSP90AB4PQ58FF6 505 aa15.6■□□□□ 0.09
LSM5-201ENST00000223084 ERC1Q8IUD2 1116 aa15.6■□□□□ 0.09
LSM5-201ENST00000223084 HMG20BQ9P0W2 317 aa15.6■□□□□ 0.09
LSM5-201ENST00000223084 DBNLQ9UJU6 430 aaKnown RBP15.6■□□□□ 0.09
LSM5-201ENST00000223084 SERPINA10Q9UK55 444 aa15.6■□□□□ 0.09
LSM5-201ENST00000223084 PCDHB15Q9Y5E8 787 aa15.6■□□□□ 0.09
LSM5-201ENST00000223084 PITPNM2Q9BZ72 1349 aa15.6■□□□□ 0.09
LSM5-201ENST00000223084 ARID4AP29374 1257 aaPredicted RBP15.59■□□□□ 0.09
LSM5-201ENST00000223084 AACSQ86V21 672 aa15.59■□□□□ 0.09
LSM5-201ENST00000223084 CDCA5Q96FF9 252 aa15.59■□□□□ 0.09
LSM5-201ENST00000223084 TDRD3Q9H7E2 651 aaKnown RBP15.59■□□□□ 0.09
LSM5-201ENST00000223084 MKRN1Q9UHC7 482 aaKnown RBP15.59■□□□□ 0.09
LSM5-201ENST00000223084 ABT1Q9ULW3 272 aaKnown RBP15.59■□□□□ 0.09
LSM5-201ENST00000223084 MCAMP43121 646 aa15.58■□□□□ 0.08
LSM5-201ENST00000223084 TTC39AQ5SRH9 613 aa15.58■□□□□ 0.08
LSM5-201ENST00000223084 KLRG1Q96E93 195 aa15.58■□□□□ 0.08
LSM5-201ENST00000223084 VEZTQ9HBM0 779 aa15.58■□□□□ 0.08
LSM5-201ENST00000223084 SNRKQ9NRH2 765 aa15.58■□□□□ 0.08
LSM5-201ENST00000223084 ABCF2Q9UG63 623 aa15.58■□□□□ 0.08
LSM5-201ENST00000223084 SUGT1Q9Y2Z0 365 aa15.58■□□□□ 0.08
LSM5-201ENST00000223084 ECM29Q5VYK3 1845 aa15.57■□□□□ 0.08
LSM5-201ENST00000223084 ZBTB22O15209 634 aa15.57■□□□□ 0.08
LSM5-201ENST00000223084 MYO1BO43795 1136 aa15.57■□□□□ 0.08
LSM5-201ENST00000223084 LDHBP07195 334 aaKnown RBP15.57■□□□□ 0.08
LSM5-201ENST00000223084 UQCRFS1P1P0C7P4 283 aa15.57■□□□□ 0.08
LSM5-201ENST00000223084 HDLBPQ00341 1268 aaKnown RBP15.57■□□□□ 0.08
LSM5-201ENST00000223084 DIXDC1Q155Q3 683 aa15.57■□□□□ 0.08
LSM5-201ENST00000223084 CCDC158Q5M9N0 1113 aa15.57■□□□□ 0.08
LSM5-201ENST00000223084 TBC1D9Q6ZT07 1266 aa15.57■□□□□ 0.08
LSM5-201ENST00000223084 SPATA5Q8NB90 893 aa15.57■□□□□ 0.08
LSM5-201ENST00000223084 TEKT1Q969V4 418 aa15.57■□□□□ 0.08
LSM5-201ENST00000223084 KIF1BPQ96EK5 621 aa15.57■□□□□ 0.08
LSM5-201ENST00000223084 ZNF70Q9UC06 446 aaPredicted RBP15.57■□□□□ 0.08
LSM5-201ENST00000223084 SALL1Q9NSC2 1324 aa15.57■□□□□ 0.08
LSM5-201ENST00000223084 SMARCA5O60264 1052 aaPredicted RBP15.56■□□□□ 0.08
LSM5-201ENST00000223084 RAB11FIP3O75154 756 aa15.56■□□□□ 0.08
LSM5-201ENST00000223084 APOBEC3FQ8IUX4 373 aaKnown RBP15.56■□□□□ 0.08
LSM5-201ENST00000223084 MAST3O60307 1309 aa15.56■□□□□ 0.08
LSM5-201ENST00000223084 PDS5AQ29RF7 1337 aaKnown RBP15.56■□□□□ 0.08
LSM5-201ENST00000223084 AKAP11Q9UKA4 1901 aa15.56■□□□□ 0.08
LSM5-201ENST00000223084 CNTNAP1P78357 1384 aa15.55■□□□□ 0.08
LSM5-201ENST00000223084 DEFB115Q30KQ5 88 aa15.55■□□□□ 0.08
LSM5-201ENST00000223084 SPDYE2Q495Y8 402 aa15.55■□□□□ 0.08
LSM5-201ENST00000223084 APOBEC3HQ6NTF7 200 aaKnown RBP15.55■□□□□ 0.08
LSM5-201ENST00000223084 HHIPL2Q6UWX4 724 aa15.55■□□□□ 0.08
LSM5-201ENST00000223084 CLASRPQ8N2M8 674 aaKnown RBP15.55■□□□□ 0.08
LSM5-201ENST00000223084 ZDHHC15Q96MV8 337 aa15.55■□□□□ 0.08
LSM5-201ENST00000223084 MRIQ9BWK5 157 aa15.55■□□□□ 0.08
LSM5-201ENST00000223084 DEFB129Q9H1M3 183 aa15.55■□□□□ 0.08
LSM5-201ENST00000223084 GBA2Q9HCG7 927 aaPredicted RBP15.55■□□□□ 0.08
LSM5-201ENST00000223084 DAGLAQ9Y4D2 1042 aa15.55■□□□□ 0.08
LSM5-201ENST00000223084 TLL2Q9Y6L7 1015 aa15.55■□□□□ 0.08
LSM5-201ENST00000223084 TCP10L2B9ZVM9 353 aa15.54■□□□□ 0.08
LSM5-201ENST00000223084 CACNB3P54284 484 aa15.54■□□□□ 0.08
LSM5-201ENST00000223084 ERICH6Q7L0X2 663 aa15.54■□□□□ 0.08
LSM5-201ENST00000223084 SAPCD2Q86UD0 394 aa15.54■□□□□ 0.08
LSM5-201ENST00000223084 DZIP1Q86YF9 867 aaKnown RBP15.54■□□□□ 0.08
LSM5-201ENST00000223084 ZGPATQ8N5A5 531 aaKnown RBP15.54■□□□□ 0.08
LSM5-201ENST00000223084 EXOC6Q8TAG9 804 aa15.54■□□□□ 0.08
LSM5-201ENST00000223084 DCTPP1Q9H773 170 aa15.54■□□□□ 0.08
LSM5-201ENST00000223084 NDUFB9Q9Y6M9 179 aa15.54■□□□□ 0.08
LSM5-201ENST00000223084 MYH2Q9UKX2 1941 aa15.54■□□□□ 0.08
LSM5-201ENST00000223084 RASSF10A6NK89 507 aa15.53■□□□□ 0.08
LSM5-201ENST00000223084 IFIT2P09913 472 aaKnown RBP15.53■□□□□ 0.08
LSM5-201ENST00000223084 ZAP70P43403 619 aa15.53■□□□□ 0.08
LSM5-201ENST00000223084 VEGFBP49765 207 aa15.53■□□□□ 0.08
LSM5-201ENST00000223084 SPTY2D1Q68D10 685 aaPredicted RBP15.53■□□□□ 0.08
LSM5-201ENST00000223084 PAXIP1Q6ZW49 1069 aaPredicted RBP15.53■□□□□ 0.08
LSM5-201ENST00000223084 MOB2Q70IA6 237 aa15.53■□□□□ 0.08
LSM5-201ENST00000223084 ZNF512BQ96KM6 892 aaPredicted RBP15.53■□□□□ 0.08
LSM5-201ENST00000223084 LRRCC1Q9C099 1032 aa15.53■□□□□ 0.08
LSM5-201ENST00000223084 MYO5AQ9Y4I1 1855 aaKnown RBP15.52■□□□□ 0.08
LSM5-201ENST00000223084 CYP2E1P05181 493 aaPredicted RBP15.52■□□□□ 0.08
LSM5-201ENST00000223084 HUNKP57058 714 aa15.52■□□□□ 0.08
LSM5-201ENST00000223084 IRX6P78412 446 aaPredicted RBP15.52■□□□□ 0.08
LSM5-201ENST00000223084 MECOMQ03112 1051 aa15.52■□□□□ 0.08
LSM5-201ENST00000223084 GRM1Q13255 1194 aa15.52■□□□□ 0.08
LSM5-201ENST00000223084 PRKG1Q13976 671 aa15.52■□□□□ 0.08
LSM5-201ENST00000223084 RASA3Q14644 834 aa15.52■□□□□ 0.08
LSM5-201ENST00000223084 CYP4F22Q6NT55 531 aa15.52■□□□□ 0.08
LSM5-201ENST00000223084 C2orf69Q8N8R5 385 aa15.52■□□□□ 0.08
LSM5-201ENST00000223084 ZNF384Q8TF68 577 aa15.52■□□□□ 0.08
LSM5-201ENST00000223084 PIH1D3Q9NQM4 214 aaKnown RBP15.52■□□□□ 0.08
LSM5-201ENST00000223084 RAI14Q9P0K7 980 aa15.52■□□□□ 0.08
LSM5-201ENST00000223084 FZD1Q9UP38 647 aa15.52■□□□□ 0.08
LSM5-201ENST00000223084 CDC42EP5Q6NZY7 148 aa15.51■□□□□ 0.07
LSM5-201ENST00000223084 LRP2BPQ9P2M1 347 aa15.51■□□□□ 0.07
LSM5-201ENST00000223084 UBE2Q2LH0YL09 131 aa15.5■□□□□ 0.07
LSM5-201ENST00000223084 TNFAIP1Q13829 316 aa15.5■□□□□ 0.07
LSM5-201ENST00000223084 TTLL12Q14166 644 aaPredicted RBP15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 154.8 ms