RNA–Protein interactions for RNA: ENST00000218652.11

NDFIP2-201, Transcript of Nedd4 family interacting protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDFIP2, Length 4,625 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDFIP2-201ENST00000218652 OTUD7BQ6GQQ9 843 aa16.86■□□□□ 0.29
NDFIP2-201ENST00000218652 MAGEB6Q8N7X4 407 aa16.86■□□□□ 0.29
NDFIP2-201ENST00000218652 UBLCP1Q8WVY7 318 aaPredicted RBP16.86■□□□□ 0.29
NDFIP2-201ENST00000218652 RASSF4Q9H2L5 321 aa16.86■□□□□ 0.29
NDFIP2-201ENST00000218652 JAG2Q9Y219 1238 aa16.86■□□□□ 0.29
NDFIP2-201ENST00000218652 FAM13AO94988 1023 aa16.86■□□□□ 0.29
NDFIP2-201ENST00000218652 HMGB2P26583 209 aaKnown RBP16.86■□□□□ 0.29
NDFIP2-201ENST00000218652 DCAF17Q5H9S7 520 aaPredicted RBP16.86■□□□□ 0.29
NDFIP2-201ENST00000218652 PPP1R7Q15435 360 aa16.86■□□□□ 0.29
NDFIP2-201ENST00000218652 NCOA5Q9HCD5 579 aaKnown RBP16.86■□□□□ 0.29
NDFIP2-201ENST00000218652 HGSO14964 777 aaPredicted RBP16.85■□□□□ 0.29
NDFIP2-201ENST00000218652 ZCRB1Q8TBF4 217 aaKnown RBP16.85■□□□□ 0.29
NDFIP2-201ENST00000218652 VIMP08670 466 aaKnown RBP16.85■□□□□ 0.29
NDFIP2-201ENST00000218652 TRAF1Q13077 416 aa16.85■□□□□ 0.29
NDFIP2-201ENST00000218652 RAB3IL1Q8TBN0 382 aa16.85■□□□□ 0.29
NDFIP2-201ENST00000218652 LRRC59Q96AG4 307 aaKnown RBP16.85■□□□□ 0.29
NDFIP2-201ENST00000218652 NSFL1CQ9UNZ2 370 aaKnown RBP16.85■□□□□ 0.29
NDFIP2-201ENST00000218652 SSX2IPQ9Y2D8 614 aa16.85■□□□□ 0.29
NDFIP2-201ENST00000218652 GNA11P29992 359 aa16.85■□□□□ 0.29
NDFIP2-201ENST00000218652 LETM2Q2VYF4 491 aa16.85■□□□□ 0.29
NDFIP2-201ENST00000218652 TXNDC16Q9P2K2 825 aa16.85■□□□□ 0.29
NDFIP2-201ENST00000218652 NDC80O14777 642 aa16.84■□□□□ 0.29
NDFIP2-201ENST00000218652 SETDB2Q96T68 719 aa16.84■□□□□ 0.29
NDFIP2-201ENST00000218652 ZBTB21Q9ULJ3 1066 aa16.84■□□□□ 0.29
NDFIP2-201ENST00000218652 ELF2Q15723 593 aa16.84■□□□□ 0.29
NDFIP2-201ENST00000218652 KRBA2Q6ZNG9 492 aa16.84■□□□□ 0.29
NDFIP2-201ENST00000218652 GPIHBP1Q8IV16 184 aa16.84■□□□□ 0.29
NDFIP2-201ENST00000218652 SUPT6HQ7KZ85 1726 aaKnown RBP16.84■□□□□ 0.29
NDFIP2-201ENST00000218652 SETDB1Q15047 1291 aa16.84■□□□□ 0.29
NDFIP2-201ENST00000218652 UTP14CQ5TAP6 766 aaKnown RBP16.84■□□□□ 0.29
NDFIP2-201ENST00000218652 PAXIP1Q6ZW49 1069 aaPredicted RBP16.84■□□□□ 0.29
NDFIP2-201ENST00000218652 ACSBG1Q96GR2 724 aa16.84■□□□□ 0.29
NDFIP2-201ENST00000218652 GBP6Q6ZN66 633 aa16.84■□□□□ 0.29
NDFIP2-201ENST00000218652 RRP36Q96EU6 259 aaKnown RBP16.84■□□□□ 0.29
NDFIP2-201ENST00000218652 ELP1O95163 1332 aa16.83■□□□□ 0.29
NDFIP2-201ENST00000218652 SP4Q02446 784 aa16.83■□□□□ 0.29
NDFIP2-201ENST00000218652 NAA25Q14CX7 972 aa16.83■□□□□ 0.29
NDFIP2-201ENST00000218652 ZBTB7BO15156 539 aaPredicted RBP16.83■□□□□ 0.28
NDFIP2-201ENST00000218652 DAAM2Q86T65 1068 aa16.83■□□□□ 0.28
NDFIP2-201ENST00000218652 NOC4LQ9BVI4 516 aaKnown RBP16.83■□□□□ 0.28
NDFIP2-201ENST00000218652 MAGI1Q96QZ7 1491 aaPredicted RBP16.83■□□□□ 0.28
NDFIP2-201ENST00000218652 HECW1Q76N89 1606 aa16.83■□□□□ 0.28
NDFIP2-201ENST00000218652 B4E1Z4 1266 aa16.83■□□□□ 0.28
NDFIP2-201ENST00000218652 ERCC3P19447 782 aa16.83■□□□□ 0.28
NDFIP2-201ENST00000218652 AKAP4Q5JQC9 854 aa16.83■□□□□ 0.28
NDFIP2-201ENST00000218652 MTUS1Q9ULD2 1270 aa16.83■□□□□ 0.28
NDFIP2-201ENST00000218652 KCNH3Q9ULD8 1083 aa16.83■□□□□ 0.28
NDFIP2-201ENST00000218652 G2E3Q7L622 706 aa16.82■□□□□ 0.28
NDFIP2-201ENST00000218652 PSMB7Q99436 277 aa16.82■□□□□ 0.28
NDFIP2-201ENST00000218652 FANCCQ00597 558 aa16.82■□□□□ 0.28
NDFIP2-201ENST00000218652 DDX23Q9BUQ8 820 aaKnown RBP16.82■□□□□ 0.28
NDFIP2-201ENST00000218652 INF2Q27J81 1249 aa16.82■□□□□ 0.28
NDFIP2-201ENST00000218652 OGFOD1Q8N543 542 aa16.82■□□□□ 0.28
NDFIP2-201ENST00000218652 TRIM31Q9BZY9 425 aa16.82■□□□□ 0.28
NDFIP2-201ENST00000218652 RILPL1Q5EBL4 403 aa16.82■□□□□ 0.28
NDFIP2-201ENST00000218652 POLR2DO15514 142 aaKnown RBP16.81■□□□□ 0.28
NDFIP2-201ENST00000218652 GNAT2P19087 354 aa16.81■□□□□ 0.28
NDFIP2-201ENST00000218652 ATP6V1AP38606 617 aa16.81■□□□□ 0.28
NDFIP2-201ENST00000218652 MAP3K9P80192 1104 aa16.81■□□□□ 0.28
NDFIP2-201ENST00000218652 SF3A3Q12874 501 aaKnown RBP eCLIP16.81■□□□□ 0.28
NDFIP2-201ENST00000218652 ANO1Q5XXA6 986 aa16.81■□□□□ 0.28
NDFIP2-201ENST00000218652 KLHDC4Q8TBB5 520 aa16.81■□□□□ 0.28
NDFIP2-201ENST00000218652 NAPGQ99747 312 aaPredicted RBP16.81■□□□□ 0.28
NDFIP2-201ENST00000218652 BICC1Q9H694 974 aaKnown RBP16.81■□□□□ 0.28
NDFIP2-201ENST00000218652 CBX8Q9HC52 389 aa16.81■□□□□ 0.28
NDFIP2-201ENST00000218652 NKIRAS1Q9NYS0 192 aa16.81■□□□□ 0.28
NDFIP2-201ENST00000218652 MAP7D1Q3KQU3 841 aa16.81■□□□□ 0.28
NDFIP2-201ENST00000218652 C8orf74Q6P047 294 aa16.81■□□□□ 0.28
NDFIP2-201ENST00000218652 TSC1Q92574 1164 aa16.81■□□□□ 0.28
NDFIP2-201ENST00000218652 MRRFQ96E11 262 aaKnown RBP16.81■□□□□ 0.28
NDFIP2-201ENST00000218652 KRT9P35527 623 aa16.81■□□□□ 0.28
NDFIP2-201ENST00000218652 SEC62Q99442 399 aaKnown RBP16.81■□□□□ 0.28
NDFIP2-201ENST00000218652 ZC3H12CQ9C0D7 883 aaKnown RBP16.81■□□□□ 0.28
NDFIP2-201ENST00000218652 IRS4O14654 1257 aaPredicted RBP16.81■□□□□ 0.28
NDFIP2-201ENST00000218652 MBD4O95243 580 aa16.81■□□□□ 0.28
NDFIP2-201ENST00000218652 LONRF3Q496Y0 759 aa16.81■□□□□ 0.28
NDFIP2-201ENST00000218652 ATL3Q6DD88 541 aa16.81■□□□□ 0.28
NDFIP2-201ENST00000218652 PLCD3Q8N3E9 789 aa16.81■□□□□ 0.28
NDFIP2-201ENST00000218652 NFE2L3Q9Y4A8 694 aa16.81■□□□□ 0.28
NDFIP2-201ENST00000218652 SPOPO43791 374 aa16.8■□□□□ 0.28
NDFIP2-201ENST00000218652 PDE4DQ08499 809 aa16.8■□□□□ 0.28
NDFIP2-201ENST00000218652 UAP1Q16222 522 aaPredicted RBP16.8■□□□□ 0.28
NDFIP2-201ENST00000218652 CD109Q6YHK3 1445 aa16.8■□□□□ 0.28
NDFIP2-201ENST00000218652 PLB1Q6P1J6 1458 aa16.8■□□□□ 0.28
NDFIP2-201ENST00000218652 RALGAPBQ86X10 1494 aa16.8■□□□□ 0.28
NDFIP2-201ENST00000218652 RPL13P26373 211 aaKnown RBP16.8■□□□□ 0.28
NDFIP2-201ENST00000218652 PPFIBP2Q8ND30 876 aa16.8■□□□□ 0.28
NDFIP2-201ENST00000218652 AFAP1L1Q8TED9 768 aa16.8■□□□□ 0.28
NDFIP2-201ENST00000218652 WWC3Q9ULE0 1092 aa16.8■□□□□ 0.28
NDFIP2-201ENST00000218652 RTL9Q8NET4 1388 aa16.8■□□□□ 0.28
NDFIP2-201ENST00000218652 GADD45BO75293 160 aaPredicted RBP16.8■□□□□ 0.28
NDFIP2-201ENST00000218652 PRDM1O75626 825 aa16.8■□□□□ 0.28
NDFIP2-201ENST00000218652 TRIM7Q9C029 511 aa16.8■□□□□ 0.28
NDFIP2-201ENST00000218652 LACTBP83111 547 aaPredicted RBP16.79■□□□□ 0.28
NDFIP2-201ENST00000218652 DIS3L2Q8IYB7 885 aaKnown RBP16.79■□□□□ 0.28
NDFIP2-201ENST00000218652 CCDC26Q8TAB7 109 aa16.79■□□□□ 0.28
NDFIP2-201ENST00000218652 FAM169AQ9Y6X4 670 aa16.79■□□□□ 0.28
NDFIP2-201ENST00000218652 SNAPC4Q5SXM2 1469 aa16.79■□□□□ 0.28
NDFIP2-201ENST00000218652 RAD50Q92878 1312 aa16.79■□□□□ 0.28
NDFIP2-201ENST00000218652 RPS6KB1P23443 525 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms