RNA–Protein interactions for RNA: ENST00000216378.2

CDKL1-201, Transcript of cyclin dependent kinase like 1, humanhuman

TSL 1 (best) BASIC

Gene CDKL1, Length 2,209 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL1-201ENST00000216378 RASGRF1Q13972 1273 aa13.58□□□□□ -0.24
CDKL1-201ENST00000216378 CLASRPQ8N2M8 674 aaKnown RBP13.58□□□□□ -0.24
CDKL1-201ENST00000216378 SUPT20HQ8NEM7 779 aa13.58□□□□□ -0.24
CDKL1-201ENST00000216378 EYA3Q99504 573 aa13.58□□□□□ -0.24
CDKL1-201ENST00000216378 BOLA2Q9H3K6 86 aa13.58□□□□□ -0.24
CDKL1-201ENST00000216378 F8W031 263 aaPredicted RBP13.58□□□□□ -0.24
CDKL1-201ENST00000216378 SLC5A1P13866 664 aa13.58□□□□□ -0.24
CDKL1-201ENST00000216378 EPS15P42566 896 aa13.58□□□□□ -0.24
CDKL1-201ENST00000216378 MCAMP43121 646 aa13.58□□□□□ -0.24
CDKL1-201ENST00000216378 CWC27Q6UX04 472 aaKnown RBP13.58□□□□□ -0.24
CDKL1-201ENST00000216378 DLK2Q6UY11 383 aa13.58□□□□□ -0.24
CDKL1-201ENST00000216378 HSCBQ8IWL3 235 aa13.58□□□□□ -0.24
CDKL1-201ENST00000216378 RGS22Q8NE09 1264 aa13.58□□□□□ -0.24
CDKL1-201ENST00000216378 TDRD7Q8NHU6 1098 aaKnown RBP13.58□□□□□ -0.24
CDKL1-201ENST00000216378 ESYT1Q9BSJ8 1104 aa13.58□□□□□ -0.24
CDKL1-201ENST00000216378 VGLL3A8MV65 326 aa13.57□□□□□ -0.24
CDKL1-201ENST00000216378 ERC2O15083 957 aa13.57□□□□□ -0.24
CDKL1-201ENST00000216378 IFIT1P09914 478 aaKnown RBP13.57□□□□□ -0.24
CDKL1-201ENST00000216378 IL1R1P14778 569 aa13.57□□□□□ -0.24
CDKL1-201ENST00000216378 SLFNL1Q499Z3 407 aa13.57□□□□□ -0.24
CDKL1-201ENST00000216378 DACT2Q5SW24 774 aa13.57□□□□□ -0.24
CDKL1-201ENST00000216378 TTLL5Q6EMB2 1281 aa13.57□□□□□ -0.24
CDKL1-201ENST00000216378 CASC1Q6TDU7 716 aa13.57□□□□□ -0.24
CDKL1-201ENST00000216378 C15orf52Q6ZUT6 534 aaKnown RBP13.57□□□□□ -0.24
CDKL1-201ENST00000216378 ZNF784Q8NCA9 323 aaPredicted RBP13.57□□□□□ -0.24
CDKL1-201ENST00000216378 ASTN2O75129 1339 aaPredicted RBP13.56□□□□□ -0.24
CDKL1-201ENST00000216378 G3V3G9 751 aa13.56□□□□□ -0.24
CDKL1-201ENST00000216378 GMPSP49915 693 aaPredicted RBP13.56□□□□□ -0.24
CDKL1-201ENST00000216378 DCAF8Q5TAQ9 597 aa13.56□□□□□ -0.24
CDKL1-201ENST00000216378 COA1Q9GZY4 146 aa13.56□□□□□ -0.24
CDKL1-201ENST00000216378 ANTXR1Q9H6X2 564 aa13.56□□□□□ -0.24
CDKL1-201ENST00000216378 GLTPD2A6NH11 291 aa13.56□□□□□ -0.24
CDKL1-201ENST00000216378 GRIPAP1Q4V328 841 aa13.56□□□□□ -0.24
CDKL1-201ENST00000216378 VPS37DQ86XT2 251 aa13.56□□□□□ -0.24
CDKL1-201ENST00000216378 RRAGCQ9HB90 399 aa13.56□□□□□ -0.24
CDKL1-201ENST00000216378 SAMD7Q7Z3H4 446 aa13.55□□□□□ -0.24
CDKL1-201ENST00000216378 KIAA0825Q8IV33 1275 aa13.55□□□□□ -0.24
CDKL1-201ENST00000216378 LARP6Q9BRS8 491 aaKnown RBP13.55□□□□□ -0.24
CDKL1-201ENST00000216378 HMG20BQ9P0W2 317 aa13.55□□□□□ -0.24
CDKL1-201ENST00000216378 CIAPIN1Q6FI81 312 aa13.55□□□□□ -0.24
CDKL1-201ENST00000216378 ZNF804AQ7Z570 1209 aa13.55□□□□□ -0.24
CDKL1-201ENST00000216378 PODNQ7Z5L7 613 aa13.55□□□□□ -0.24
CDKL1-201ENST00000216378 ZNF384Q8TF68 577 aa13.55□□□□□ -0.24
CDKL1-201ENST00000216378 ADAMTSL1Q8N6G6 1762 aa13.55□□□□□ -0.24
CDKL1-201ENST00000216378 USP17L3A6NCW0 530 aa13.54□□□□□ -0.24
CDKL1-201ENST00000216378 USP17L4A6NCW7 530 aa13.54□□□□□ -0.24
CDKL1-201ENST00000216378 VIL1P09327 827 aaKnown RBP13.54□□□□□ -0.24
CDKL1-201ENST00000216378 PRDX5P30044 214 aa13.54□□□□□ -0.24
CDKL1-201ENST00000216378 EIF6P56537 245 aaKnown RBP13.54□□□□□ -0.24
CDKL1-201ENST00000216378 HSP90AB4PQ58FF6 505 aa13.54□□□□□ -0.24
CDKL1-201ENST00000216378 CAVIN4Q5BKX8 364 aa13.54□□□□□ -0.24
CDKL1-201ENST00000216378 USP17L1Q7RTZ2 530 aa13.54□□□□□ -0.24
CDKL1-201ENST00000216378 ARAP2Q8WZ64 1704 aa13.54□□□□□ -0.24
CDKL1-201ENST00000216378 GMLQ99445 158 aa13.54□□□□□ -0.24
CDKL1-201ENST00000216378 AKAP2Q9Y2D5 859 aa13.54□□□□□ -0.24
CDKL1-201ENST00000216378 HIRAP54198 1017 aaPredicted RBP13.54□□□□□ -0.24
CDKL1-201ENST00000216378 RBM26Q5T8P6 1007 aaKnown RBP13.54□□□□□ -0.24
CDKL1-201ENST00000216378 TRPM4Q8TD43 1214 aa13.54□□□□□ -0.24
CDKL1-201ENST00000216378 ECHDC1Q9NTX5 307 aa13.54□□□□□ -0.24
CDKL1-201ENST00000216378 MYO5AQ9Y4I1 1855 aaKnown RBP13.53□□□□□ -0.24
CDKL1-201ENST00000216378 ZAP70P43403 619 aa13.53□□□□□ -0.24
CDKL1-201ENST00000216378 MFSD14BQ5SR56 506 aa13.53□□□□□ -0.24
CDKL1-201ENST00000216378 GORABQ5T7V8 394 aa13.53□□□□□ -0.24
CDKL1-201ENST00000216378 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.53□□□□□ -0.24
CDKL1-201ENST00000216378 GPC2Q8N158 579 aa13.53□□□□□ -0.24
CDKL1-201ENST00000216378 FAM227BQ96M60 508 aa13.53□□□□□ -0.24
CDKL1-201ENST00000216378 UPF3BQ9BZI7 483 aaKnown RBP13.53□□□□□ -0.24
CDKL1-201ENST00000216378 GPR108Q9NPR9 543 aa13.53□□□□□ -0.24
CDKL1-201ENST00000216378 AK9Q5TCS8 1911 aa13.53□□□□□ -0.24
CDKL1-201ENST00000216378 AKAP11Q9UKA4 1901 aa13.53□□□□□ -0.24
CDKL1-201ENST00000216378 KIF20AO95235 890 aa13.52□□□□□ -0.24
CDKL1-201ENST00000216378 CYP2E1P05181 493 aaPredicted RBP13.52□□□□□ -0.24
CDKL1-201ENST00000216378 RSBN1LQ6PCB5 846 aaPredicted RBP13.52□□□□□ -0.24
CDKL1-201ENST00000216378 ERC1Q8IUD2 1116 aa13.52□□□□□ -0.24
CDKL1-201ENST00000216378 VPS33BQ9H267 617 aa13.52□□□□□ -0.24
CDKL1-201ENST00000216378 CPA1P15085 419 aa13.52□□□□□ -0.25
CDKL1-201ENST00000216378 FMR1Q06787 632 aaKnown RBP eCLIP13.52□□□□□ -0.25
CDKL1-201ENST00000216378 DIXDC1Q155Q3 683 aa13.52□□□□□ -0.25
CDKL1-201ENST00000216378 TBC1D10BQ4KMP7 808 aaPredicted RBP13.52□□□□□ -0.25
CDKL1-201ENST00000216378 STRIP1Q5VSL9 837 aa13.52□□□□□ -0.25
CDKL1-201ENST00000216378 MICALL2Q8IY33 904 aa13.52□□□□□ -0.25
CDKL1-201ENST00000216378 DNAJC2Q99543 621 aaKnown RBP13.52□□□□□ -0.25
CDKL1-201ENST00000216378 PIH1D3Q9NQM4 214 aaKnown RBP13.52□□□□□ -0.25
CDKL1-201ENST00000216378 REC8O95072 547 aa13.51□□□□□ -0.25
CDKL1-201ENST00000216378 ARID4AP29374 1257 aaPredicted RBP13.51□□□□□ -0.25
CDKL1-201ENST00000216378 TERF1P54274 439 aa13.51□□□□□ -0.25
CDKL1-201ENST00000216378 CNOT7Q9UIV1 285 aaKnown RBP13.51□□□□□ -0.25
CDKL1-201ENST00000216378 PTH1RQ03431 593 aa13.51□□□□□ -0.25
CDKL1-201ENST00000216378 COL9A3Q14050 684 aaPredicted RBP13.51□□□□□ -0.25
CDKL1-201ENST00000216378 TTC39AQ5SRH9 613 aa13.51□□□□□ -0.25
CDKL1-201ENST00000216378 CNTROBQ8N137 903 aa13.51□□□□□ -0.25
CDKL1-201ENST00000216378 SPATA5Q8NB90 893 aa13.51□□□□□ -0.25
CDKL1-201ENST00000216378 GPRC5DQ9NZD1 345 aa13.51□□□□□ -0.25
CDKL1-201ENST00000216378 ABCF2Q9UG63 623 aa13.51□□□□□ -0.25
CDKL1-201ENST00000216378 KIF3CO14782 793 aa13.5□□□□□ -0.25
CDKL1-201ENST00000216378 GLRX3O76003 335 aaKnown RBP13.5□□□□□ -0.25
CDKL1-201ENST00000216378 ZSCAN20P17040 1043 aaPredicted RBP13.5□□□□□ -0.25
CDKL1-201ENST00000216378 ADGRA1Q86SQ6 560 aa13.5□□□□□ -0.25
CDKL1-201ENST00000216378 ANP32BQ92688 251 aaKnown RBP13.5□□□□□ -0.25
CDKL1-201ENST00000216378 KCNG1Q9UIX4 513 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms