RNA–Protein interactions for RNA: ENST00000175091.4

LAPTM4A-201, Transcript of lysosomal protein transmembrane 4 alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LAPTM4A, Length 1,765 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4A-201ENST00000175091 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.53■□□□□ 0.56
LAPTM4A-201ENST00000175091 SRGNP10124 158 aa18.53■□□□□ 0.56
LAPTM4A-201ENST00000175091 HAND2P61296 217 aa18.53■□□□□ 0.56
LAPTM4A-201ENST00000175091 EXOSC10Q01780 885 aaKnown RBP18.53■□□□□ 0.56
LAPTM4A-201ENST00000175091 MSL1Q68DK7 614 aa18.53■□□□□ 0.56
LAPTM4A-201ENST00000175091 Q6ZUG5 572 aa18.53■□□□□ 0.56
LAPTM4A-201ENST00000175091 CCDC83Q8IWF9 413 aa18.53■□□□□ 0.56
LAPTM4A-201ENST00000175091 GBP4Q96PP9 640 aa18.53■□□□□ 0.56
LAPTM4A-201ENST00000175091 STK32BQ9NY57 414 aa18.53■□□□□ 0.56
LAPTM4A-201ENST00000175091 ZDHHC9Q9Y397 364 aa18.53■□□□□ 0.56
LAPTM4A-201ENST00000175091 LAMB1P07942 1786 aa18.52■□□□□ 0.55
LAPTM4A-201ENST00000175091 ZNF213O14771 459 aa18.52■□□□□ 0.55
LAPTM4A-201ENST00000175091 PPEF1O14829 653 aaPredicted RBP18.52■□□□□ 0.55
LAPTM4A-201ENST00000175091 GNAT2P19087 354 aa18.52■□□□□ 0.55
LAPTM4A-201ENST00000175091 CYP7A1P22680 504 aa18.52■□□□□ 0.55
LAPTM4A-201ENST00000175091 ATP2B4P23634 1241 aa18.52■□□□□ 0.55
LAPTM4A-201ENST00000175091 ZNF384Q8TF68 577 aa18.52■□□□□ 0.55
LAPTM4A-201ENST00000175091 NBPF3Q9H094 633 aa18.52■□□□□ 0.55
LAPTM4A-201ENST00000175091 SALL1Q9NSC2 1324 aa18.52■□□□□ 0.55
LAPTM4A-201ENST00000175091 PATL2C9JE40 543 aaKnown RBP18.51■□□□□ 0.55
LAPTM4A-201ENST00000175091 UFL1O94874 794 aa18.51■□□□□ 0.55
LAPTM4A-201ENST00000175091 NPR1P16066 1061 aa18.51■□□□□ 0.55
LAPTM4A-201ENST00000175091 PDE6BP35913 854 aa18.51■□□□□ 0.55
LAPTM4A-201ENST00000175091 ZNF804AQ7Z570 1209 aa18.51■□□□□ 0.55
LAPTM4A-201ENST00000175091 GGA1Q9UJY5 639 aa18.51■□□□□ 0.55
LAPTM4A-201ENST00000175091 NSFL1CQ9UNZ2 370 aaKnown RBP18.51■□□□□ 0.55
LAPTM4A-201ENST00000175091 BRD1O95696 1058 aa18.5■□□□□ 0.55
LAPTM4A-201ENST00000175091 TMED8Q6PL24 325 aaPredicted RBP18.5■□□□□ 0.55
LAPTM4A-201ENST00000175091 FBXL16Q8N461 479 aa18.5■□□□□ 0.55
LAPTM4A-201ENST00000175091 MIGA1Q8NAN2 632 aa18.5■□□□□ 0.55
LAPTM4A-201ENST00000175091 TDRD7Q8NHU6 1098 aaKnown RBP18.5■□□□□ 0.55
LAPTM4A-201ENST00000175091 NSUN4Q96CB9 384 aaKnown RBP18.5■□□□□ 0.55
LAPTM4A-201ENST00000175091 RIOK1Q9BRS2 568 aaKnown RBP18.5■□□□□ 0.55
LAPTM4A-201ENST00000175091 DDX11L8A8MPP1 907 aa18.5■□□□□ 0.55
LAPTM4A-201ENST00000175091 GSG1L2A8MUP6 293 aa18.5■□□□□ 0.55
LAPTM4A-201ENST00000175091 APPP05067 770 aa18.5■□□□□ 0.55
LAPTM4A-201ENST00000175091 TBC1D10CQ8IV04 446 aa18.5■□□□□ 0.55
LAPTM4A-201ENST00000175091 MB21D2Q8IYB1 491 aaPredicted RBP18.5■□□□□ 0.55
LAPTM4A-201ENST00000175091 IFNL3Q8IZI9 196 aa18.5■□□□□ 0.55
LAPTM4A-201ENST00000175091 GPR101Q96P66 508 aaPredicted RBP18.5■□□□□ 0.55
LAPTM4A-201ENST00000175091 BAZ2AQ9UIF9 1905 aaKnown RBP18.49■□□□□ 0.55
LAPTM4A-201ENST00000175091 DLEC1Q9Y238 1755 aa18.49■□□□□ 0.55
LAPTM4A-201ENST00000175091 IGSF3O75054 1194 aa18.49■□□□□ 0.55
LAPTM4A-201ENST00000175091 PRDX5P30044 214 aa18.49■□□□□ 0.55
LAPTM4A-201ENST00000175091 BAG6P46379 1132 aa18.49■□□□□ 0.55
LAPTM4A-201ENST00000175091 CHAF1AQ13111 956 aaPredicted RBP18.49■□□□□ 0.55
LAPTM4A-201ENST00000175091 NAA16Q6N069 864 aaPredicted RBP18.49■□□□□ 0.55
LAPTM4A-201ENST00000175091 SP8Q8IXZ3 490 aa18.49■□□□□ 0.55
LAPTM4A-201ENST00000175091 NECAB1Q8N987 351 aa18.49■□□□□ 0.55
LAPTM4A-201ENST00000175091 TBC1D16Q8TBP0 767 aa18.49■□□□□ 0.55
LAPTM4A-201ENST00000175091 BRF1Q92994 677 aa18.49■□□□□ 0.55
LAPTM4A-201ENST00000175091 LRRC2Q9BYS8 371 aa18.49■□□□□ 0.55
LAPTM4A-201ENST00000175091 SMC3Q9UQE7 1217 aa18.49■□□□□ 0.55
LAPTM4A-201ENST00000175091 ATP6V0A2Q9Y487 856 aa18.49■□□□□ 0.55
LAPTM4A-201ENST00000175091 WDR19Q8NEZ3 1342 aa18.48■□□□□ 0.55
LAPTM4A-201ENST00000175091 MAGEB6P1A0A0J9YX57 407 aa18.48■□□□□ 0.55
LAPTM4A-201ENST00000175091 MECOMQ03112 1051 aa18.48■□□□□ 0.55
LAPTM4A-201ENST00000175091 NCOA7Q8NI08 942 aa18.48■□□□□ 0.55
LAPTM4A-201ENST00000175091 NAPBQ9H115 298 aa18.48■□□□□ 0.55
LAPTM4A-201ENST00000175091 SLC4A4Q9Y6R1 1079 aa18.48■□□□□ 0.55
LAPTM4A-201ENST00000175091 PRKAB2O43741 272 aa18.47■□□□□ 0.55
LAPTM4A-201ENST00000175091 GTF3C6Q969F1 213 aa18.47■□□□□ 0.55
LAPTM4A-201ENST00000175091 MASTLQ96GX5 879 aa18.47■□□□□ 0.55
LAPTM4A-201ENST00000175091 POLLQ9UGP5 575 aa18.47■□□□□ 0.55
LAPTM4A-201ENST00000175091 BAG4O95429 457 aaKnown RBP18.47■□□□□ 0.55
LAPTM4A-201ENST00000175091 ALDH1B1P30837 517 aa18.47■□□□□ 0.55
LAPTM4A-201ENST00000175091 SF3B2Q13435 895 aaKnown RBP18.47■□□□□ 0.55
LAPTM4A-201ENST00000175091 RALYLQ86SE5 291 aaKnown RBP18.47■□□□□ 0.55
LAPTM4A-201ENST00000175091 WDR66Q8TBY9 1149 aa18.47■□□□□ 0.55
LAPTM4A-201ENST00000175091 NACAP1Q9BZK3 213 aa18.47■□□□□ 0.55
LAPTM4A-201ENST00000175091 IL1R1P14778 569 aa18.46■□□□□ 0.55
LAPTM4A-201ENST00000175091 GJB2P29033 226 aa18.46■□□□□ 0.55
LAPTM4A-201ENST00000175091 MCM5P33992 734 aa18.46■□□□□ 0.55
LAPTM4A-201ENST00000175091 FGD1P98174 961 aa18.46■□□□□ 0.55
LAPTM4A-201ENST00000175091 CD209Q9NNX6 404 aa18.46■□□□□ 0.55
LAPTM4A-201ENST00000175091 MYH2Q9UKX2 1941 aa18.46■□□□□ 0.55
LAPTM4A-201ENST00000175091 TDO2P48775 406 aa18.45■□□□□ 0.54
LAPTM4A-201ENST00000175091 ANTXR2P58335 489 aa18.45■□□□□ 0.54
LAPTM4A-201ENST00000175091 SPTY2D1Q68D10 685 aaPredicted RBP18.45■□□□□ 0.54
LAPTM4A-201ENST00000175091 JAG2Q9Y219 1238 aa18.45■□□□□ 0.54
LAPTM4A-201ENST00000175091 SLX4Q8IY92 1834 aa18.45■□□□□ 0.54
LAPTM4A-201ENST00000175091 CDK5RAP2Q96SN8 1893 aa18.45■□□□□ 0.54
LAPTM4A-201ENST00000175091 NEDD4P46934 1319 aa18.45■□□□□ 0.54
LAPTM4A-201ENST00000175091 WDR33Q9C0J8 1336 aaKnown RBP18.45■□□□□ 0.54
LAPTM4A-201ENST00000175091 EVCP57679 992 aa18.45■□□□□ 0.54
LAPTM4A-201ENST00000175091 CHST3Q7LGC8 479 aa18.45■□□□□ 0.54
LAPTM4A-201ENST00000175091 DEFB132Q7Z7B7 95 aa18.45■□□□□ 0.54
LAPTM4A-201ENST00000175091 PRC1O43663 620 aa18.44■□□□□ 0.54
LAPTM4A-201ENST00000175091 PFKFB2O60825 505 aa18.44■□□□□ 0.54
LAPTM4A-201ENST00000175091 DYNLL1P63167 89 aaKnown RBP18.44■□□□□ 0.54
LAPTM4A-201ENST00000175091 APOBRQ0VD83 1088 aa18.44■□□□□ 0.54
LAPTM4A-201ENST00000175091 TRDNQ13061 729 aa18.44■□□□□ 0.54
LAPTM4A-201ENST00000175091 STK3Q13188 491 aa18.44■□□□□ 0.54
LAPTM4A-201ENST00000175091 NAV1Q8NEY1 1877 aa18.44■□□□□ 0.54
LAPTM4A-201ENST00000175091 SDR42E1Q8WUS8 393 aa18.44■□□□□ 0.54
LAPTM4A-201ENST00000175091 C10orf71Q711Q0 1435 aa18.43■□□□□ 0.54
LAPTM4A-201ENST00000175091 SYT1P21579 422 aa18.43■□□□□ 0.54
LAPTM4A-201ENST00000175091 DZIP1Q86YF9 867 aaKnown RBP18.43■□□□□ 0.54
LAPTM4A-201ENST00000175091 STX6O43752 255 aa18.42■□□□□ 0.54
LAPTM4A-201ENST00000175091 PTMSP20962 102 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms