RNA–Protein interactions for RNA: ENST00000156825.5

MBD3-201, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene MBD3, Length 5,518 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-201ENST00000156825 KRT13P13646 458 aa21.37■■□□□ 1.01
MBD3-201ENST00000156825 CYLC1P35663 651 aaPredicted RBP21.37■■□□□ 1.01
MBD3-201ENST00000156825 PUM3Q15397 648 aaKnown RBP21.37■■□□□ 1.01
MBD3-201ENST00000156825 SPAG1Q07617 926 aa21.37■■□□□ 1.01
MBD3-201ENST00000156825 FCHSD1Q86WN1 690 aa21.37■■□□□ 1.01
MBD3-201ENST00000156825 INTS4Q96HW7 963 aaKnown RBP21.37■■□□□ 1.01
MBD3-201ENST00000156825 EIF2AK4Q9P2K8 1649 aaKnown RBP21.37■■□□□ 1.01
MBD3-201ENST00000156825 MCM3P25205 808 aa21.37■■□□□ 1.01
MBD3-201ENST00000156825 TERF1P54274 439 aa21.37■■□□□ 1.01
MBD3-201ENST00000156825 RNF187Q5TA31 235 aaPredicted RBP21.37■■□□□ 1.01
MBD3-201ENST00000156825 SYNCQ9H7C4 482 aa21.37■■□□□ 1.01
MBD3-201ENST00000156825 RAD50Q92878 1312 aa21.37■■□□□ 1.01
MBD3-201ENST00000156825 UNC13AQ9UPW8 1703 aa21.37■■□□□ 1.01
MBD3-201ENST00000156825 PSMD1Q99460 953 aa21.37■■□□□ 1.01
MBD3-201ENST00000156825 DNAI2Q9GZS0 605 aa21.36■■□□□ 1.01
MBD3-201ENST00000156825 PDE8AO60658 829 aa21.36■■□□□ 1.01
MBD3-201ENST00000156825 UBXN1Q04323 297 aa21.36■■□□□ 1.01
MBD3-201ENST00000156825 CTDSPL2Q05D32 466 aa21.36■■□□□ 1.01
MBD3-201ENST00000156825 DENND2AQ9ULE3 1009 aa21.36■■□□□ 1.01
MBD3-201ENST00000156825 LTKP29376 864 aa21.36■■□□□ 1.01
MBD3-201ENST00000156825 ZAP70P43403 619 aa21.36■■□□□ 1.01
MBD3-201ENST00000156825 PHKBQ93100 1093 aa21.36■■□□□ 1.01
MBD3-201ENST00000156825 SGSM2O43147 1006 aa21.36■■□□□ 1.01
MBD3-201ENST00000156825 MCM6Q14566 821 aa21.36■■□□□ 1.01
MBD3-201ENST00000156825 TBC1D5Q92609 795 aa21.36■■□□□ 1.01
MBD3-201ENST00000156825 GNA11P29992 359 aa21.35■■□□□ 1.01
MBD3-201ENST00000156825 ADAMTS12P58397 1594 aa21.35■■□□□ 1.01
MBD3-201ENST00000156825 PARP1P09874 1014 aaKnown RBP21.35■■□□□ 1.01
MBD3-201ENST00000156825 EIF4A1P60842 406 aaKnown RBP21.35■■□□□ 1.01
MBD3-201ENST00000156825 TMEM87AQ8NBN3 555 aa21.35■■□□□ 1.01
MBD3-201ENST00000156825 VTI1AQ96AJ9 217 aa21.35■■□□□ 1.01
MBD3-201ENST00000156825 GJA3Q9Y6H8 435 aa21.35■■□□□ 1.01
MBD3-201ENST00000156825 APPBP2Q92624 585 aa21.35■■□□□ 1.01
MBD3-201ENST00000156825 GUCA1BQ9UMX6 200 aa21.35■■□□□ 1.01
MBD3-201ENST00000156825 KIAA0753Q2KHM9 967 aa21.34■■□□□ 1.01
MBD3-201ENST00000156825 BRAPQ7Z569 592 aa21.34■■□□□ 1.01
MBD3-201ENST00000156825 CAPZA3Q96KX2 299 aa21.34■■□□□ 1.01
MBD3-201ENST00000156825 TAOK3Q9H2K8 898 aa21.34■■□□□ 1.01
MBD3-201ENST00000156825 TMEM110-MUSTN1A8MSY1 372 aa21.34■■□□□ 1.01
MBD3-201ENST00000156825 FAM13AO94988 1023 aa21.34■■□□□ 1.01
MBD3-201ENST00000156825 CCT6AP40227 531 aaKnown RBP21.34■■□□□ 1.01
MBD3-201ENST00000156825 PIK3AP1Q6ZUJ8 805 aa21.34■■□□□ 1.01
MBD3-201ENST00000156825 CTTNBP2Q8WZ74 1663 aa21.34■■□□□ 1.01
MBD3-201ENST00000156825 LMAN1P49257 510 aa21.34■■□□□ 1.01
MBD3-201ENST00000156825 ERCC3P19447 782 aa21.33■■□□□ 1.01
MBD3-201ENST00000156825 TTC6Q86TZ1 520 aa21.33■■□□□ 1.01
MBD3-201ENST00000156825 GPIHBP1Q8IV16 184 aa21.33■■□□□ 1.01
MBD3-201ENST00000156825 IQUBQ8NA54 791 aa21.33■■□□□ 1.01
MBD3-201ENST00000156825 ZKSCAN5Q9Y2L8 839 aa21.33■■□□□ 1.01
MBD3-201ENST00000156825 IL17REQ8NFR9 667 aa21.33■■□□□ 1.01
MBD3-201ENST00000156825 CCDC42Q96M95 316 aa21.33■■□□□ 1
MBD3-201ENST00000156825 PAXBP1Q9Y5B6 917 aa21.33■■□□□ 1
MBD3-201ENST00000156825 ABCC2Q92887 1545 aa21.33■■□□□ 1
MBD3-201ENST00000156825 CCDC91Q7Z6B0 441 aa21.33■■□□□ 1
MBD3-201ENST00000156825 KBTBD3Q8NAB2 608 aa21.33■■□□□ 1
MBD3-201ENST00000156825 EYA3Q99504 573 aa21.33■■□□□ 1
MBD3-201ENST00000156825 ARHGEF12Q9NZN5 1544 aa21.32■■□□□ 1
MBD3-201ENST00000156825 CHMP2AO43633 222 aa21.32■■□□□ 1
MBD3-201ENST00000156825 PARP10Q53GL7 1025 aa21.32■■□□□ 1
MBD3-201ENST00000156825 BACH1O14867 736 aa21.32■■□□□ 1
MBD3-201ENST00000156825 JAK2O60674 1132 aa21.32■■□□□ 1
MBD3-201ENST00000156825 ANGEL1Q9UNK9 670 aaKnown RBP21.32■■□□□ 1
MBD3-201ENST00000156825 CTAGE15A4D2H0 777 aa21.32■■□□□ 1
MBD3-201ENST00000156825 CTAGE8P0CG41 777 aa21.32■■□□□ 1
MBD3-201ENST00000156825 TRAF1Q13077 416 aa21.32■■□□□ 1
MBD3-201ENST00000156825 CTAGE6Q86UF2 777 aa21.32■■□□□ 1
MBD3-201ENST00000156825 CTAGE4Q8IX94 777 aa21.32■■□□□ 1
MBD3-201ENST00000156825 GCOM1H8Y6P7 765 aaPredicted RBP21.31■■□□□ 1
MBD3-201ENST00000156825 MYZAPP0CAP1 466 aa21.31■■□□□ 1
MBD3-201ENST00000156825 TCP10Q12799 353 aa21.31■■□□□ 1
MBD3-201ENST00000156825 RBM17Q96I25 401 aaKnown RBP21.31■■□□□ 1
MBD3-201ENST00000156825 CCDC87Q9NVE4 849 aa21.31■■□□□ 1
MBD3-201ENST00000156825 EHBP1Q8NDI1 1231 aa21.31■■□□□ 1
MBD3-201ENST00000156825 DIS3L2Q8IYB7 885 aaKnown RBP21.3■■□□□ 1
MBD3-201ENST00000156825 SLAIN2Q9P270 581 aa21.3■■□□□ 1
MBD3-201ENST00000156825 SHANK2Q9UPX8 1470 aa21.3■■□□□ 1
MBD3-201ENST00000156825 CCDC175P0C221 793 aa21.3■■□□□ 1
MBD3-201ENST00000156825 DCAF17Q5H9S7 520 aaPredicted RBP21.3■■□□□ 1
MBD3-201ENST00000156825 HS2ST1Q7LGA3 356 aa21.3■■□□□ 1
MBD3-201ENST00000156825 PTPRTO14522 1441 aa21.3■■□□□ 1
MBD3-201ENST00000156825 FNBP4Q8N3X1 1017 aaPredicted RBP21.3■■□□□ 1
MBD3-201ENST00000156825 ZNF532Q9HCE3 1301 aa21.3■■□□□ 1
MBD3-201ENST00000156825 HOXB7P09629 217 aa21.3■■□□□ 1
MBD3-201ENST00000156825 ACTN2P35609 894 aa21.3■■□□□ 1
MBD3-201ENST00000156825 KIF5AQ12840 1032 aa21.29■■□□□ 1
MBD3-201ENST00000156825 TTLL7Q6ZT98 887 aa21.29■■□□□ 1
MBD3-201ENST00000156825 ATP2C2O75185 946 aa21.29■■□□□ 1
MBD3-201ENST00000156825 PRKG1Q13976 671 aa21.29■■□□□ 1
MBD3-201ENST00000156825 MAPKAPK5Q8IW41 473 aa21.29■■□□□ 1
MBD3-201ENST00000156825 MPHOSPH6Q99547 160 aaKnown RBP21.29■■□□□ 1
MBD3-201ENST00000156825 USP44Q9H0E7 712 aa21.29■■□□□ 1
MBD3-201ENST00000156825 GGA1Q9UJY5 639 aa21.29■■□□□ 1
MBD3-201ENST00000156825 DISP1Q96F81 1524 aa21.29■■□□□ 1
MBD3-201ENST00000156825 CCDC172P0C7W6 258 aa21.29■■□□□ 1
MBD3-201ENST00000156825 HARSP12081 509 aaKnown RBP21.29■■□□□ 1
MBD3-201ENST00000156825 RBSNQ9H1K0 784 aa21.29■■□□□ 1
MBD3-201ENST00000156825 POLD1P28340 1107 aa21.29■■□□□ 1
MBD3-201ENST00000156825 SMC1AQ14683 1233 aaKnown RBP21.29■■□□□ 1
MBD3-201ENST00000156825 PRIMPOLQ96LW4 560 aa21.29■■□□□ 1
MBD3-201ENST00000156825 KCNJ14Q9UNX9 436 aa21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms