RNA–Protein interactions for RNA: ENST00000035307.6

CHPF2-201, Transcript of chondroitin polymerizing factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHPF2, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-201ENST00000035307 ISCA1Q9BUE6 129 aa13.99□□□□□ -0.17
CHPF2-201ENST00000035307 THRAP3Q9Y2W1 955 aaKnown RBP13.99□□□□□ -0.17
CHPF2-201ENST00000035307 TAF6LQ9Y6J9 622 aa13.99□□□□□ -0.17
CHPF2-201ENST00000035307 CPDO75976 1380 aa13.99□□□□□ -0.17
CHPF2-201ENST00000035307 NCOA3Q9Y6Q9 1424 aa13.99□□□□□ -0.17
CHPF2-201ENST00000035307 TPM1P09493 284 aa13.99□□□□□ -0.17
CHPF2-201ENST00000035307 ME3Q16798 604 aa13.99□□□□□ -0.17
CHPF2-201ENST00000035307 TXNRD1Q16881 649 aa13.99□□□□□ -0.17
CHPF2-201ENST00000035307 GPT2Q8TD30 523 aa13.99□□□□□ -0.17
CHPF2-201ENST00000035307 SLC12A7Q9Y666 1083 aa13.99□□□□□ -0.17
CHPF2-201ENST00000035307 NCAPD2Q15021 1401 aa13.99□□□□□ -0.17
CHPF2-201ENST00000035307 A0A0G2JLW4 131 aa13.98□□□□□ -0.17
CHPF2-201ENST00000035307 CLCN1P35523 988 aa13.98□□□□□ -0.17
CHPF2-201ENST00000035307 EIF5P55010 431 aaKnown RBP13.98□□□□□ -0.17
CHPF2-201ENST00000035307 DYNLL1P63167 89 aaKnown RBP13.98□□□□□ -0.17
CHPF2-201ENST00000035307 CCDC186Q7Z3E2 898 aa13.98□□□□□ -0.17
CHPF2-201ENST00000035307 CRACR2BQ8N4Y2 399 aaPredicted RBP13.98□□□□□ -0.17
CHPF2-201ENST00000035307 CPLX3Q8WVH0 158 aa13.98□□□□□ -0.17
CHPF2-201ENST00000035307 COL15A1P39059 1388 aa13.98□□□□□ -0.17
CHPF2-201ENST00000035307 UBN2Q6ZU65 1347 aa13.98□□□□□ -0.17
CHPF2-201ENST00000035307 A0A087WWV3 80 aa13.98□□□□□ -0.17
CHPF2-201ENST00000035307 TPM2P07951 284 aa13.98□□□□□ -0.17
CHPF2-201ENST00000035307 HSPA4P34932 840 aa13.98□□□□□ -0.17
CHPF2-201ENST00000035307 MCAMP43121 646 aa13.98□□□□□ -0.17
CHPF2-201ENST00000035307 NCOA7Q8NI08 942 aa13.98□□□□□ -0.17
CHPF2-201ENST00000035307 UIMC1Q96RL1 719 aa13.98□□□□□ -0.17
CHPF2-201ENST00000035307 PTPDC1A2A3K4 754 aa13.98□□□□□ -0.17
CHPF2-201ENST00000035307 PDE6AP16499 860 aa13.98□□□□□ -0.17
CHPF2-201ENST00000035307 DIXDC1Q155Q3 683 aa13.98□□□□□ -0.17
CHPF2-201ENST00000035307 STAP2Q9UGK3 403 aa13.98□□□□□ -0.17
CHPF2-201ENST00000035307 PEAK1Q9H792 1746 aa13.98□□□□□ -0.17
CHPF2-201ENST00000035307 ZBTB7AO95365 584 aa13.98□□□□□ -0.17
CHPF2-201ENST00000035307 MAPKAPK5Q8IW41 473 aa13.98□□□□□ -0.17
CHPF2-201ENST00000035307 JMYQ8N9B5 988 aa13.98□□□□□ -0.17
CHPF2-201ENST00000035307 BRMS1Q9HCU9 246 aa13.98□□□□□ -0.17
CHPF2-201ENST00000035307 STK32BQ9NY57 414 aa13.98□□□□□ -0.17
CHPF2-201ENST00000035307 OVOS2A0A0G2JMS6 1433 aa13.97□□□□□ -0.17
CHPF2-201ENST00000035307 M0R2C6 588 aa13.97□□□□□ -0.17
CHPF2-201ENST00000035307 HSPD1P10809 573 aaKnown RBP13.97□□□□□ -0.17
CHPF2-201ENST00000035307 RASGRF1Q13972 1273 aa13.97□□□□□ -0.17
CHPF2-201ENST00000035307 NFIXQ14938 502 aa13.97□□□□□ -0.17
CHPF2-201ENST00000035307 ATG9AQ7Z3C6 839 aa13.97□□□□□ -0.17
CHPF2-201ENST00000035307 CCDC112Q8NEF3 446 aa13.97□□□□□ -0.17
CHPF2-201ENST00000035307 TSC1Q92574 1164 aa13.97□□□□□ -0.17
CHPF2-201ENST00000035307 HAUS7Q99871 368 aa13.97□□□□□ -0.17
CHPF2-201ENST00000035307 PIH1D3Q9NQM4 214 aaKnown RBP13.97□□□□□ -0.17
CHPF2-201ENST00000035307 FGAP02671 866 aa13.97□□□□□ -0.17
CHPF2-201ENST00000035307 LDHBP07195 334 aaKnown RBP13.97□□□□□ -0.17
CHPF2-201ENST00000035307 METAP2P50579 478 aaKnown RBP eCLIP13.97□□□□□ -0.17
CHPF2-201ENST00000035307 FAM47AQ5JRC9 791 aa13.97□□□□□ -0.17
CHPF2-201ENST00000035307 INTS5Q6P9B9 1019 aaKnown RBP13.97□□□□□ -0.17
CHPF2-201ENST00000035307 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.97□□□□□ -0.17
CHPF2-201ENST00000035307 V9GYY5 206 aaPredicted RBP13.97□□□□□ -0.17
CHPF2-201ENST00000035307 NALCNQ8IZF0 1738 aa13.97□□□□□ -0.17
CHPF2-201ENST00000035307 RPS6KA4O75676 772 aa13.97□□□□□ -0.17
CHPF2-201ENST00000035307 LARGE1O95461 756 aa13.97□□□□□ -0.17
CHPF2-201ENST00000035307 SLC3A2P08195 630 aaKnown RBP13.97□□□□□ -0.17
CHPF2-201ENST00000035307 ZNF444Q8N0Y2 327 aaPredicted RBP13.97□□□□□ -0.17
CHPF2-201ENST00000035307 NOC3LQ8WTT2 800 aaKnown RBP13.97□□□□□ -0.17
CHPF2-201ENST00000035307 APPBP2Q92624 585 aa13.97□□□□□ -0.17
CHPF2-201ENST00000035307 LSG1Q9H089 658 aaKnown RBP13.97□□□□□ -0.17
CHPF2-201ENST00000035307 IARSP41252 1262 aaKnown RBP13.96□□□□□ -0.17
CHPF2-201ENST00000035307 KIAA0825Q8IV33 1275 aa13.96□□□□□ -0.17
CHPF2-201ENST00000035307 DBNDD1Q9H9R9 158 aa13.96□□□□□ -0.17
CHPF2-201ENST00000035307 HMG20BQ9P0W2 317 aa13.96□□□□□ -0.17
CHPF2-201ENST00000035307 A0A1B0GVL5 298 aa13.96□□□□□ -0.17
CHPF2-201ENST00000035307 CYP21A2P08686 494 aa13.96□□□□□ -0.17
CHPF2-201ENST00000035307 MCM5P33992 734 aa13.96□□□□□ -0.17
CHPF2-201ENST00000035307 HMGN5P82970 282 aaKnown RBP13.96□□□□□ -0.17
CHPF2-201ENST00000035307 SKIDA1Q1XH10 827 aa13.96□□□□□ -0.17
CHPF2-201ENST00000035307 C3orf67Q6ZVT6 689 aa13.96□□□□□ -0.17
CHPF2-201ENST00000035307 PHKBQ93100 1093 aa13.96□□□□□ -0.17
CHPF2-201ENST00000035307 VEZTQ9HBM0 779 aa13.96□□□□□ -0.17
CHPF2-201ENST00000035307 ZHX3Q9H4I2 956 aa13.96□□□□□ -0.18
CHPF2-201ENST00000035307 SSBP05455 408 aaKnown RBP eCLIP13.95□□□□□ -0.18
CHPF2-201ENST00000035307 TYRO3Q06418 890 aa13.95□□□□□ -0.18
CHPF2-201ENST00000035307 DPP8Q6V1X1 898 aaPredicted RBP13.95□□□□□ -0.18
CHPF2-201ENST00000035307 GGA1Q9UJY5 639 aa13.95□□□□□ -0.18
CHPF2-201ENST00000035307 CAMTA2O94983 1202 aa13.95□□□□□ -0.18
CHPF2-201ENST00000035307 INTS4Q96HW7 963 aaKnown RBP13.95□□□□□ -0.18
CHPF2-201ENST00000035307 TPCN1Q9ULQ1 816 aa13.95□□□□□ -0.18
CHPF2-201ENST00000035307 DCCP43146 1447 aa13.95□□□□□ -0.18
CHPF2-201ENST00000035307 PTGS1P23219 599 aa13.95□□□□□ -0.18
CHPF2-201ENST00000035307 CBX1P83916 185 aa13.95□□□□□ -0.18
CHPF2-201ENST00000035307 NKX1-1Q15270 411 aaPredicted RBP13.95□□□□□ -0.18
CHPF2-201ENST00000035307 PSDA5PKW4 1024 aaPredicted RBP13.94□□□□□ -0.18
CHPF2-201ENST00000035307 ZFYP08048 801 aaPredicted RBP13.94□□□□□ -0.18
CHPF2-201ENST00000035307 HMGB1P09429 215 aaKnown RBP13.94□□□□□ -0.18
CHPF2-201ENST00000035307 NAP1L1P55209 391 aaKnown RBP13.94□□□□□ -0.18
CHPF2-201ENST00000035307 ANKRD20A12PQ8NF67 263 aa13.94□□□□□ -0.18
CHPF2-201ENST00000035307 ALG1Q9BT22 464 aa13.94□□□□□ -0.18
CHPF2-201ENST00000035307 OSBPL3Q9H4L5 887 aa13.94□□□□□ -0.18
CHPF2-201ENST00000035307 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.94□□□□□ -0.18
CHPF2-201ENST00000035307 RGS12O14924 1447 aa13.94□□□□□ -0.18
CHPF2-201ENST00000035307 MAST3O60307 1309 aa13.94□□□□□ -0.18
CHPF2-201ENST00000035307 USP17L12C9JPN9 530 aa13.94□□□□□ -0.18
CHPF2-201ENST00000035307 USP17L21D6R901 530 aa13.94□□□□□ -0.18
CHPF2-201ENST00000035307 CDKL5O76039 1030 aa13.94□□□□□ -0.18
CHPF2-201ENST00000035307 BRD1O95696 1058 aa13.94□□□□□ -0.18
CHPF2-201ENST00000035307 LMOD1P29536 600 aaPredicted RBP13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms