RNA–Protein interactions for RNA: ENST00000005226.11

USH1C-201, Transcript of USH1 protein network component harmonin, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USH1C, Length 2,700 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-201ENST00000005226 KIF23Q02241 960 aaPredicted RBP16.26■□□□□ 0.19
USH1C-201ENST00000005226 PNOCQ13519 176 aa16.26■□□□□ 0.19
USH1C-201ENST00000005226 IMMTQ16891 758 aaKnown RBP16.26■□□□□ 0.19
USH1C-201ENST00000005226 TTC39AQ5SRH9 613 aa16.26■□□□□ 0.19
USH1C-201ENST00000005226 INCENPQ9NQS7 918 aa16.26■□□□□ 0.19
USH1C-201ENST00000005226 CEP126Q9P2H0 1117 aa16.26■□□□□ 0.19
USH1C-201ENST00000005226 IMPACTQ9P2X3 320 aa16.26■□□□□ 0.19
USH1C-201ENST00000005226 TMEM232C9JQI7 657 aa16.26■□□□□ 0.19
USH1C-201ENST00000005226 TERF2Q15554 542 aa16.26■□□□□ 0.19
USH1C-201ENST00000005226 MB21D2Q8IYB1 491 aaPredicted RBP16.26■□□□□ 0.19
USH1C-201ENST00000005226 PHKBQ93100 1093 aa16.26■□□□□ 0.19
USH1C-201ENST00000005226 XAGE2Q96GT9 111 aa16.26■□□□□ 0.19
USH1C-201ENST00000005226 POLR3EQ9NVU0 708 aa16.26■□□□□ 0.19
USH1C-201ENST00000005226 YEATS4O95619 227 aa16.25■□□□□ 0.19
USH1C-201ENST00000005226 SPECC1Q5M775 1068 aa16.25■□□□□ 0.19
USH1C-201ENST00000005226 EPC1Q9H2F5 836 aa16.25■□□□□ 0.19
USH1C-201ENST00000005226 ERICH4A6NGS2 130 aa16.25■□□□□ 0.19
USH1C-201ENST00000005226 FANCGO15287 622 aa16.25■□□□□ 0.19
USH1C-201ENST00000005226 GABPB1Q06547 395 aaPredicted RBP16.25■□□□□ 0.19
USH1C-201ENST00000005226 SLIT3O75094 1523 aa16.25■□□□□ 0.19
USH1C-201ENST00000005226 EVCP57679 992 aa16.25■□□□□ 0.19
USH1C-201ENST00000005226 CCDC150Q8NCX0 1101 aa16.25■□□□□ 0.19
USH1C-201ENST00000005226 SERPINC1P01008 464 aa16.24■□□□□ 0.19
USH1C-201ENST00000005226 ARHGAP29Q52LW3 1261 aa16.24■□□□□ 0.19
USH1C-201ENST00000005226 RALYLQ86SE5 291 aaKnown RBP16.24■□□□□ 0.19
USH1C-201ENST00000005226 SYNE4Q8N205 404 aa16.24■□□□□ 0.19
USH1C-201ENST00000005226 MYL10Q9BUA6 226 aa16.24■□□□□ 0.19
USH1C-201ENST00000005226 UTP14AQ9BVJ6 771 aaKnown RBP16.24■□□□□ 0.19
USH1C-201ENST00000005226 FER1L4A9Z1Z3 1794 aa16.24■□□□□ 0.19
USH1C-201ENST00000005226 FOXN1O15353 648 aa16.24■□□□□ 0.19
USH1C-201ENST00000005226 CMA1P23946 247 aa16.24■□□□□ 0.19
USH1C-201ENST00000005226 SYKP43405 635 aa16.24■□□□□ 0.19
USH1C-201ENST00000005226 UBASH3AP57075 661 aa16.24■□□□□ 0.19
USH1C-201ENST00000005226 CCDC93Q567U6 631 aa16.24■□□□□ 0.19
USH1C-201ENST00000005226 SHC4Q6S5L8 630 aa16.24■□□□□ 0.19
USH1C-201ENST00000005226 L2HGDHQ9H9P8 463 aa16.24■□□□□ 0.19
USH1C-201ENST00000005226 GPR108Q9NPR9 543 aa16.24■□□□□ 0.19
USH1C-201ENST00000005226 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.24■□□□□ 0.19
USH1C-201ENST00000005226 ABCC6O95255 1503 aa16.23■□□□□ 0.19
USH1C-201ENST00000005226 PHRF1Q9P1Y6 1649 aaKnown RBP16.23■□□□□ 0.19
USH1C-201ENST00000005226 ZNF213O14771 459 aa16.23■□□□□ 0.19
USH1C-201ENST00000005226 CLCN6P51797 869 aa16.23■□□□□ 0.19
USH1C-201ENST00000005226 CFAP100Q494V2 611 aa16.23■□□□□ 0.19
USH1C-201ENST00000005226 CCDC158Q5M9N0 1113 aa16.23■□□□□ 0.19
USH1C-201ENST00000005226 PROSER2Q86WR7 435 aaPredicted RBP16.23■□□□□ 0.19
USH1C-201ENST00000005226 BPIFA3Q9BQP9 254 aa16.23■□□□□ 0.19
USH1C-201ENST00000005226 ALG1Q9BT22 464 aa16.23■□□□□ 0.19
USH1C-201ENST00000005226 KCND1Q9NSA2 647 aa16.23■□□□□ 0.19
USH1C-201ENST00000005226 GPAA1O43292 621 aa16.23■□□□□ 0.19
USH1C-201ENST00000005226 CYB5R4Q7L1T6 521 aa16.23■□□□□ 0.19
USH1C-201ENST00000005226 FOXP4Q8IVH2 680 aaPredicted RBP16.23■□□□□ 0.19
USH1C-201ENST00000005226 NCOA7Q8NI08 942 aa16.23■□□□□ 0.19
USH1C-201ENST00000005226 NBPF3Q9H094 633 aa16.23■□□□□ 0.19
USH1C-201ENST00000005226 TPM4P67936 248 aa16.22■□□□□ 0.19
USH1C-201ENST00000005226 SLC39A14Q15043 492 aa16.22■□□□□ 0.19
USH1C-201ENST00000005226 FAM89AQ96GI7 184 aa16.22■□□□□ 0.19
USH1C-201ENST00000005226 FANCLQ9NW38 375 aa16.22■□□□□ 0.19
USH1C-201ENST00000005226 FAM53CQ9NYF3 392 aa16.22■□□□□ 0.19
USH1C-201ENST00000005226 PSDA5PKW4 1024 aaPredicted RBP16.22■□□□□ 0.19
USH1C-201ENST00000005226 DHX16O60231 1041 aaKnown RBP16.22■□□□□ 0.19
USH1C-201ENST00000005226 URI1O94763 535 aaPredicted RBP16.22■□□□□ 0.19
USH1C-201ENST00000005226 APPP05067 770 aa16.22■□□□□ 0.19
USH1C-201ENST00000005226 CDC27P30260 824 aa16.22■□□□□ 0.19
USH1C-201ENST00000005226 CCDC57Q2TAC2 916 aa16.22■□□□□ 0.19
USH1C-201ENST00000005226 LONRF3Q496Y0 759 aa16.22■□□□□ 0.19
USH1C-201ENST00000005226 BRAPQ7Z569 592 aa16.22■□□□□ 0.19
USH1C-201ENST00000005226 VPS37DQ86XT2 251 aa16.22■□□□□ 0.19
USH1C-201ENST00000005226 SCN11AQ9UI33 1791 aa16.22■□□□□ 0.19
USH1C-201ENST00000005226 ARFGEF2Q9Y6D5 1785 aa16.22■□□□□ 0.19
USH1C-201ENST00000005226 A0A0U1RQG5 324 aaPredicted RBP16.21■□□□□ 0.19
USH1C-201ENST00000005226 KIF2AO00139 706 aaPredicted RBP16.21■□□□□ 0.19
USH1C-201ENST00000005226 PDE4BQ07343 736 aa16.21■□□□□ 0.19
USH1C-201ENST00000005226 GNL2Q13823 731 aaKnown RBP16.21■□□□□ 0.19
USH1C-201ENST00000005226 KRT40Q6A162 431 aa16.21■□□□□ 0.19
USH1C-201ENST00000005226 MICU3Q86XE3 530 aa16.21■□□□□ 0.19
USH1C-201ENST00000005226 ADAMTS7Q9UKP4 1686 aa16.21■□□□□ 0.19
USH1C-201ENST00000005226 ZBTB22O15209 634 aa16.21■□□□□ 0.19
USH1C-201ENST00000005226 H2AFXP16104 143 aaPredicted RBP16.21■□□□□ 0.19
USH1C-201ENST00000005226 ETF1P62495 437 aaKnown RBP16.21■□□□□ 0.19
USH1C-201ENST00000005226 TBC1D10CQ8IV04 446 aa16.21■□□□□ 0.19
USH1C-201ENST00000005226 ZBTB9Q96C00 473 aa16.21■□□□□ 0.19
USH1C-201ENST00000005226 TRIM65Q6PJ69 517 aa16.2■□□□□ 0.18
USH1C-201ENST00000005226 CARD6Q9BX69 1037 aa16.2■□□□□ 0.18
USH1C-201ENST00000005226 FHOD1Q9Y613 1164 aa16.2■□□□□ 0.18
USH1C-201ENST00000005226 SEC31AO94979 1220 aaKnown RBP16.2■□□□□ 0.18
USH1C-201ENST00000005226 NWD2Q9ULI1 1742 aa16.2■□□□□ 0.18
USH1C-201ENST00000005226 B4E1Z4 1266 aa16.19■□□□□ 0.18
USH1C-201ENST00000005226 BMP6P22004 513 aa16.19■□□□□ 0.18
USH1C-201ENST00000005226 TAF7LQ5H9L4 462 aa16.19■□□□□ 0.18
USH1C-201ENST00000005226 METTL16Q86W50 562 aaKnown RBP16.19■□□□□ 0.18
USH1C-201ENST00000005226 PDILTQ8N807 584 aa16.19■□□□□ 0.18
USH1C-201ENST00000005226 APPBP2Q92624 585 aa16.19■□□□□ 0.18
USH1C-201ENST00000005226 METAP2P50579 478 aaKnown RBP eCLIP16.19■□□□□ 0.18
USH1C-201ENST00000005226 PTPAQ15257 358 aa16.19■□□□□ 0.18
USH1C-201ENST00000005226 REXO1L1PQ8IX06 675 aa16.19■□□□□ 0.18
USH1C-201ENST00000005226 FBXL16Q8N461 479 aa16.19■□□□□ 0.18
USH1C-201ENST00000005226 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.19■□□□□ 0.18
USH1C-201ENST00000005226 PCDHA5Q9Y5H7 936 aa16.19■□□□□ 0.18
USH1C-201ENST00000005226 MYL5Q02045 173 aa16.18■□□□□ 0.18
USH1C-201ENST00000005226 GRIN1Q05586 938 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms