RNA–Protein interactions for RNA: ENSMUST00000213114.1

Ldlr-202, Transcript of Low-density lipoprotein receptor, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ldlr, Length 4,318 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldlr-202ENSMUST00000213114 Ccdc191J3QQ27 883 aa10.77□□□□□ -0.68
Ldlr-202ENSMUST00000213114 Cdcp1Q5U462 833 aa10.77□□□□□ -0.68
Ldlr-202ENSMUST00000213114 Ccdc12Q8R344 166 aaKnown RBP10.77□□□□□ -0.68
Ldlr-202ENSMUST00000213114 Tns3Q5SSZ5 1440 aa10.77□□□□□ -0.68
Ldlr-202ENSMUST00000213114 Prr16A3KMN5 304 aa10.77□□□□□ -0.69
Ldlr-202ENSMUST00000213114 MarcksP26645 309 aaKnown RBP10.77□□□□□ -0.69
Ldlr-202ENSMUST00000213114 Frat1P70339 274 aa10.77□□□□□ -0.69
Ldlr-202ENSMUST00000213114 Znf697Q569E7 569 aa10.77□□□□□ -0.69
Ldlr-202ENSMUST00000213114 Lrrc59Q922Q8 307 aaKnown RBP10.77□□□□□ -0.69
Ldlr-202ENSMUST00000213114 Mrpl12Q9DB15 201 aaKnown RBP10.77□□□□□ -0.69
Ldlr-202ENSMUST00000213114 Topbp1Q6ZQF0 1515 aa10.77□□□□□ -0.69
Ldlr-202ENSMUST00000213114 Fam228bQ497Q6 232 aa10.77□□□□□ -0.69
Ldlr-202ENSMUST00000213114 Ift88Q61371 824 aa10.77□□□□□ -0.69
Ldlr-202ENSMUST00000213114 Zfp113Q8C689 439 aa10.77□□□□□ -0.69
Ldlr-202ENSMUST00000213114 Kcnj14Q8JZN3 434 aa10.77□□□□□ -0.69
Ldlr-202ENSMUST00000213114 StrbpQ91WM1 672 aaKnown RBP10.77□□□□□ -0.69
Ldlr-202ENSMUST00000213114 Rbm43Q99J64 343 aa10.77□□□□□ -0.69
Ldlr-202ENSMUST00000213114 Luc7lQ9CYI4 371 aaKnown RBP10.77□□□□□ -0.69
Ldlr-202ENSMUST00000213114 Knop1Q9Z2Q2 478 aaKnown RBP10.77□□□□□ -0.69
Ldlr-202ENSMUST00000213114 1700113H08RikE9Q9Q5 327 aa10.77□□□□□ -0.69
Ldlr-202ENSMUST00000213114 Akr1c19G3X9Y6 323 aa10.77□□□□□ -0.69
Ldlr-202ENSMUST00000213114 Zdhhc9P59268 364 aa10.77□□□□□ -0.69
Ldlr-202ENSMUST00000213114 NpeppsQ11011 920 aa10.77□□□□□ -0.69
Ldlr-202ENSMUST00000213114 Cyp24a1Q64441 514 aa10.77□□□□□ -0.69
Ldlr-202ENSMUST00000213114 Ccdc122Q8BVN0 290 aa10.77□□□□□ -0.69
Ldlr-202ENSMUST00000213114 Grpel1Q99LP6 217 aa10.77□□□□□ -0.69
Ldlr-202ENSMUST00000213114 Kcnh3Q9WVJ0 1095 aa10.77□□□□□ -0.69
Ldlr-202ENSMUST00000213114 Xrn1P97789 1719 aaKnown RBP10.76□□□□□ -0.69
Ldlr-202ENSMUST00000213114 Gpr182P43142 395 aa10.76□□□□□ -0.69
Ldlr-202ENSMUST00000213114 TnrQ8BYI9 1358 aa10.76□□□□□ -0.69
Ldlr-202ENSMUST00000213114 Prl3d1P18121 224 aa10.76□□□□□ -0.69
Ldlr-202ENSMUST00000213114 Rrp1P56183 494 aaKnown RBP10.76□□□□□ -0.69
Ldlr-202ENSMUST00000213114 Trim56Q80VI1 734 aaKnown RBP10.76□□□□□ -0.69
Ldlr-202ENSMUST00000213114 Tut1Q8R3F9 869 aa10.76□□□□□ -0.69
Ldlr-202ENSMUST00000213114 Ncf1Q09014 390 aa10.76□□□□□ -0.69
Ldlr-202ENSMUST00000213114 Hspa4Q61316 841 aa10.76□□□□□ -0.69
Ldlr-202ENSMUST00000213114 Asap2Q7SIG6 958 aa10.76□□□□□ -0.69
Ldlr-202ENSMUST00000213114 Q8BZJ8 459 aa10.76□□□□□ -0.69
Ldlr-202ENSMUST00000213114 Uchl5Q9WUP7 329 aa10.76□□□□□ -0.69
Ldlr-202ENSMUST00000213114 Sh3tc1G3X9F6 1346 aa10.76□□□□□ -0.69
Ldlr-202ENSMUST00000213114 Gemin5Q8BX17 1502 aaKnown RBP10.76□□□□□ -0.69
Ldlr-202ENSMUST00000213114 Trim30cD3YVI9 513 aa10.75□□□□□ -0.69
Ldlr-202ENSMUST00000213114 Cd22P35329 862 aa10.75□□□□□ -0.69
Ldlr-202ENSMUST00000213114 Mdh1bQ5F204 500 aa10.75□□□□□ -0.69
Ldlr-202ENSMUST00000213114 Ccdc93Q7TQK5 629 aa10.75□□□□□ -0.69
Ldlr-202ENSMUST00000213114 Cyp4f39Q8BGU0 532 aa10.75□□□□□ -0.69
Ldlr-202ENSMUST00000213114 Tcp11l1Q8BTG3 509 aa10.75□□□□□ -0.69
Ldlr-202ENSMUST00000213114 Cdan1Q8CC12 1239 aa10.75□□□□□ -0.69
Ldlr-202ENSMUST00000213114 Brd3Q8K2F0 726 aaKnown RBP10.75□□□□□ -0.69
Ldlr-202ENSMUST00000213114 Polr2dQ9D7M8 142 aaKnown RBP10.75□□□□□ -0.69
Ldlr-202ENSMUST00000213114 AmfrQ9R049 643 aa10.75□□□□□ -0.69
Ldlr-202ENSMUST00000213114 Cyp2ab1S4R196 498 aa10.75□□□□□ -0.69
Ldlr-202ENSMUST00000213114 PtprmP28828 1452 aa10.75□□□□□ -0.69
Ldlr-202ENSMUST00000213114 Ripor2Q80U16 1078 aa10.75□□□□□ -0.69
Ldlr-202ENSMUST00000213114 Atad2Q8CDM1 1040 aa10.75□□□□□ -0.69
Ldlr-202ENSMUST00000213114 Tab2Q99K90 693 aa10.75□□□□□ -0.69
Ldlr-202ENSMUST00000213114 Dph6Q9CQ28 267 aa10.75□□□□□ -0.69
Ldlr-202ENSMUST00000213114 Iqsec2Q5DU25 1478 aa10.75□□□□□ -0.69
Ldlr-202ENSMUST00000213114 Cyp26a1O55127 497 aa10.75□□□□□ -0.69
Ldlr-202ENSMUST00000213114 Ccdc129Q14B48 1034 aa10.75□□□□□ -0.69
Ldlr-202ENSMUST00000213114 Nop2Q922K7 793 aaKnown RBP10.75□□□□□ -0.69
Ldlr-202ENSMUST00000213114 Tmem2Q5FWI3 1383 aa10.75□□□□□ -0.69
Ldlr-202ENSMUST00000213114 Erbb4Q61527 1308 aa10.75□□□□□ -0.69
Ldlr-202ENSMUST00000213114 Oas2E9Q9A9 742 aa10.75□□□□□ -0.69
Ldlr-202ENSMUST00000213114 Ptgs1P22437 602 aa10.75□□□□□ -0.69
Ldlr-202ENSMUST00000213114 Jakmip3Q5DTN8 844 aa10.75□□□□□ -0.69
Ldlr-202ENSMUST00000213114 Themis2Q91YX0 663 aa10.75□□□□□ -0.69
Ldlr-202ENSMUST00000213114 Tfcp2Q9ERA0 502 aa10.75□□□□□ -0.69
Ldlr-202ENSMUST00000213114 Clip2Q9Z0H8 1047 aa10.75□□□□□ -0.69
Ldlr-202ENSMUST00000213114 MaddQ80U28 1577 aa10.74□□□□□ -0.69
Ldlr-202ENSMUST00000213114 Cyp2d11P24457 504 aa10.74□□□□□ -0.69
Ldlr-202ENSMUST00000213114 Kcnj4P52189 445 aa10.74□□□□□ -0.69
Ldlr-202ENSMUST00000213114 Ssrp1Q08943 708 aaKnown RBP10.74□□□□□ -0.69
Ldlr-202ENSMUST00000213114 Plbd2Q3TCN2 594 aa10.74□□□□□ -0.69
Ldlr-202ENSMUST00000213114 Zbtb1Q91VL9 713 aa10.74□□□□□ -0.69
Ldlr-202ENSMUST00000213114 Fam84aQ9D650 292 aa10.74□□□□□ -0.69
Ldlr-202ENSMUST00000213114 Mroh1E0CZ22 1640 aa10.74□□□□□ -0.69
Ldlr-202ENSMUST00000213114 Npc1l1Q6T3U4 1333 aa10.74□□□□□ -0.69
Ldlr-202ENSMUST00000213114 IghaA0A0A6YXW6 389 aa10.74□□□□□ -0.69
Ldlr-202ENSMUST00000213114 A0A1W2P7S8 802 aa10.74□□□□□ -0.69
Ldlr-202ENSMUST00000213114 1700029H14RikE9PY36 240 aa10.74□□□□□ -0.69
Ldlr-202ENSMUST00000213114 Gm20425E9Q035 978 aaKnown RBP10.74□□□□□ -0.69
Ldlr-202ENSMUST00000213114 SrprbP47758 269 aa10.74□□□□□ -0.69
Ldlr-202ENSMUST00000213114 Mcm6P97311 821 aa10.74□□□□□ -0.69
Ldlr-202ENSMUST00000213114 Cdc5lQ6A068 802 aaKnown RBP10.74□□□□□ -0.69
Ldlr-202ENSMUST00000213114 Ubac1Q8VDI7 409 aa10.74□□□□□ -0.69
Ldlr-202ENSMUST00000213114 2310002L09RikQ9D7L5 217 aa10.74□□□□□ -0.69
Ldlr-202ENSMUST00000213114 Tecpr2Q3UH45 1423 aa10.74□□□□□ -0.69
Ldlr-202ENSMUST00000213114 Ms4a2P20490 235 aa10.74□□□□□ -0.69
Ldlr-202ENSMUST00000213114 Ncapg2Q6DFV1 1138 aa10.74□□□□□ -0.69
Ldlr-202ENSMUST00000213114 Gps2Q921N8 327 aa10.74□□□□□ -0.69
Ldlr-202ENSMUST00000213114 Dnajc25A2ALW5 357 aa10.73□□□□□ -0.69
Ldlr-202ENSMUST00000213114 Pde8bE9Q4S1 865 aa10.73□□□□□ -0.69
Ldlr-202ENSMUST00000213114 Calm1P0DP26 149 aaKnown RBP10.73□□□□□ -0.69
Ldlr-202ENSMUST00000213114 Calm2P0DP27 149 aaKnown RBP10.73□□□□□ -0.69
Ldlr-202ENSMUST00000213114 Calm3P0DP28 149 aaKnown RBP10.73□□□□□ -0.69
Ldlr-202ENSMUST00000213114 GnaqP21279 359 aa10.73□□□□□ -0.69
Ldlr-202ENSMUST00000213114 Rnf34Q99KR6 376 aa10.73□□□□□ -0.69
Ldlr-202ENSMUST00000213114 CltcQ68FD5 1675 aaKnown RBP10.73□□□□□ -0.69
Ldlr-202ENSMUST00000213114 CtcfQ61164 736 aaKnown RBP10.73□□□□□ -0.69
Retrieved 100 of 22,080 RNA–protein pairs in 20.7 ms