RNA–Protein interactions for RNA: ENSMUST00000135636.5

Sort1-203, Transcript of Sortilin, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Sort1, Length 6,836 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sort1-203ENSMUST00000135636 InhbeO08717 350 aa20.83■□□□□ 0.92
Sort1-203ENSMUST00000135636 Ubxn2aQ99KJ0 258 aa20.83■□□□□ 0.92
Sort1-203ENSMUST00000135636 Ttc21aQ8C0S4 1314 aa20.83■□□□□ 0.92
Sort1-203ENSMUST00000135636 HarsQ61035 509 aa20.83■□□□□ 0.92
Sort1-203ENSMUST00000135636 Gm1043A0A140LJC2 1431 aa20.83■□□□□ 0.92
Sort1-203ENSMUST00000135636 Cyp2c68K7N6C2 491 aa20.82■□□□□ 0.92
Sort1-203ENSMUST00000135636 ChkbO55229 394 aa20.82■□□□□ 0.92
Sort1-203ENSMUST00000135636 Capza3P70190 299 aa20.82■□□□□ 0.92
Sort1-203ENSMUST00000135636 Atp1b3P97370 278 aa20.82■□□□□ 0.92
Sort1-203ENSMUST00000135636 Pex1Q5BL07 1284 aa20.82■□□□□ 0.92
Sort1-203ENSMUST00000135636 Dnajb7Q9QYI8 312 aa20.82■□□□□ 0.92
Sort1-203ENSMUST00000135636 Trpc6Q61143 930 aa20.82■□□□□ 0.92
Sort1-203ENSMUST00000135636 Gna11P21278 359 aa20.82■□□□□ 0.92
Sort1-203ENSMUST00000135636 Abcb4P21440 1276 aa20.82■□□□□ 0.92
Sort1-203ENSMUST00000135636 Specc1Q5SXY1 1067 aa20.82■□□□□ 0.92
Sort1-203ENSMUST00000135636 Cracr2bQ80ZJ8 394 aa20.82■□□□□ 0.92
Sort1-203ENSMUST00000135636 Rasa1E9PYG6 1038 aa20.81■□□□□ 0.92
Sort1-203ENSMUST00000135636 Dpp8Q80YA7 892 aa20.81■□□□□ 0.92
Sort1-203ENSMUST00000135636 Dnm2P39054 870 aaKnown RBP20.81■□□□□ 0.92
Sort1-203ENSMUST00000135636 Rdm1Q9CQK3 281 aa20.81■□□□□ 0.92
Sort1-203ENSMUST00000135636 Sult6b1P0CC03 303 aa20.81■□□□□ 0.92
Sort1-203ENSMUST00000135636 Arpp19P56212 112 aaKnown RBP20.81■□□□□ 0.92
Sort1-203ENSMUST00000135636 Arhgef6Q8K4I3 771 aa20.81■□□□□ 0.92
Sort1-203ENSMUST00000135636 Clrn2B2RVW2 232 aa20.81■□□□□ 0.92
Sort1-203ENSMUST00000135636 Diaph2O70566 1098 aa20.81■□□□□ 0.92
Sort1-203ENSMUST00000135636 Prpf38aQ4FK66 312 aaKnown RBP20.81■□□□□ 0.92
Sort1-203ENSMUST00000135636 Psmd6Q99JI4 389 aa20.8■□□□□ 0.92
Sort1-203ENSMUST00000135636 Ddx24Q9ESV0 857 aaKnown RBP20.8■□□□□ 0.92
Sort1-203ENSMUST00000135636 Tacc3Q9JJ11 631 aa20.8■□□□□ 0.92
Sort1-203ENSMUST00000135636 Ccdc170D3YXL0 722 aa20.8■□□□□ 0.92
Sort1-203ENSMUST00000135636 Rnaseh2aQ9CWY8 301 aa20.8■□□□□ 0.92
Sort1-203ENSMUST00000135636 Mcur1Q9CXD6 340 aa20.8■□□□□ 0.92
Sort1-203ENSMUST00000135636 Art2aP17981 287 aa20.8■□□□□ 0.92
Sort1-203ENSMUST00000135636 Ift88Q61371 824 aa20.8■□□□□ 0.92
Sort1-203ENSMUST00000135636 Rsph3bQ9DA80 389 aa20.8■□□□□ 0.92
Sort1-203ENSMUST00000135636 CsadQ9DBE0 493 aa20.8■□□□□ 0.92
Sort1-203ENSMUST00000135636 NpatQ8BMA5 1420 aa20.8■□□□□ 0.92
Sort1-203ENSMUST00000135636 Bicd1Q8BR07 835 aa20.8■□□□□ 0.92
Sort1-203ENSMUST00000135636 Eddm13E9Q7F5 164 aa20.8■□□□□ 0.92
Sort1-203ENSMUST00000135636 Ncoa3O09000 1398 aa20.8■□□□□ 0.92
Sort1-203ENSMUST00000135636 Vps41Q5KU39 853 aa20.79■□□□□ 0.92
Sort1-203ENSMUST00000135636 CtcfQ61164 736 aaKnown RBP20.79■□□□□ 0.92
Sort1-203ENSMUST00000135636 DohhA0A1Y7VJ29 135 aa20.79■□□□□ 0.92
Sort1-203ENSMUST00000135636 Ube3aO08759 870 aa20.79■□□□□ 0.92
Sort1-203ENSMUST00000135636 Ddx19aQ61655 478 aaKnown RBP20.79■□□□□ 0.92
Sort1-203ENSMUST00000135636 Ccdc6D3YZP9 469 aa20.79■□□□□ 0.92
Sort1-203ENSMUST00000135636 GlyctkQ8QZY2 523 aa20.79■□□□□ 0.92
Sort1-203ENSMUST00000135636 Galnt15Q9D2N8 638 aa20.79■□□□□ 0.92
Sort1-203ENSMUST00000135636 Atp8b2P98199 1209 aa20.79■□□□□ 0.92
Sort1-203ENSMUST00000135636 Hspa4Q61316 841 aa20.79■□□□□ 0.92
Sort1-203ENSMUST00000135636 Ccdc12Q8R344 166 aaKnown RBP20.79■□□□□ 0.92
Sort1-203ENSMUST00000135636 SfpqQ8VIJ6 699 aaKnown RBP20.79■□□□□ 0.92
Sort1-203ENSMUST00000135636 Bank1Q80VH0 783 aa20.79■□□□□ 0.92
Sort1-203ENSMUST00000135636 Serpina3bQ8BYY9 420 aa20.79■□□□□ 0.92
Sort1-203ENSMUST00000135636 Vmn1r213Q8R278 384 aa20.79■□□□□ 0.92
Sort1-203ENSMUST00000135636 Mast3Q3U214 1321 aa20.79■□□□□ 0.92
Sort1-203ENSMUST00000135636 Ccdc174Q3U155 467 aa20.78■□□□□ 0.92
Sort1-203ENSMUST00000135636 Kiaa0319Q5SZV5 1081 aa20.78■□□□□ 0.92
Sort1-203ENSMUST00000135636 Spa17Q62252 149 aa20.78■□□□□ 0.92
Sort1-203ENSMUST00000135636 Csrnp2Q8BGQ2 534 aa20.78■□□□□ 0.92
Sort1-203ENSMUST00000135636 Igbp1bQ9QZ29 343 aa20.78■□□□□ 0.92
Sort1-203ENSMUST00000135636 Mtmr2Q9Z2D1 643 aa20.78■□□□□ 0.92
Sort1-203ENSMUST00000135636 Slc10a4Q3UEZ8 437 aa20.78■□□□□ 0.92
Sort1-203ENSMUST00000135636 Cyp24a1Q64441 514 aa20.78■□□□□ 0.92
Sort1-203ENSMUST00000135636 Klhl30Q8C3F7 581 aa20.78■□□□□ 0.92
Sort1-203ENSMUST00000135636 Hps4Q99KG7 671 aa20.78■□□□□ 0.92
Sort1-203ENSMUST00000135636 Madcam1Q61826 405 aa20.78■□□□□ 0.92
Sort1-203ENSMUST00000135636 Pard3bQ9CSB4 1203 aa20.78■□□□□ 0.92
Sort1-203ENSMUST00000135636 Zfp853A0A1D5RM95 733 aa20.78■□□□□ 0.92
Sort1-203ENSMUST00000135636 Abcf1Q6P542 837 aaKnown RBP20.78■□□□□ 0.92
Sort1-203ENSMUST00000135636 Kif9Q9WV04 790 aa20.78■□□□□ 0.92
Sort1-203ENSMUST00000135636 Ptch1Q61115 1434 aa20.78■□□□□ 0.92
Sort1-203ENSMUST00000135636 Naa15Q80UM3 865 aaKnown RBP20.78■□□□□ 0.92
Sort1-203ENSMUST00000135636 Gps2Q921N8 327 aa20.78■□□□□ 0.92
Sort1-203ENSMUST00000135636 Mtmr3Q8K296 1196 aa20.77■□□□□ 0.92
Sort1-203ENSMUST00000135636 Wdr63B2RY71 923 aa20.77■□□□□ 0.92
Sort1-203ENSMUST00000135636 L3mbtl2P59178 703 aa20.77■□□□□ 0.92
Sort1-203ENSMUST00000135636 CactinQ9CS00 772 aaKnown RBP20.77■□□□□ 0.92
Sort1-203ENSMUST00000135636 Scyl1Q9EQC5 806 aaKnown RBP20.77■□□□□ 0.92
Sort1-203ENSMUST00000135636 Zfp213E9QAW0 468 aa20.77■□□□□ 0.92
Sort1-203ENSMUST00000135636 Slc38a10Q5I012 1090 aa20.77■□□□□ 0.92
Sort1-203ENSMUST00000135636 Kif11Q6P9P6 1052 aa20.77■□□□□ 0.92
Sort1-203ENSMUST00000135636 Edc3Q8K2D3 508 aaKnown RBP20.77■□□□□ 0.92
Sort1-203ENSMUST00000135636 Gpatch8A2A6A1 1505 aa20.77■□□□□ 0.91
Sort1-203ENSMUST00000135636 Polr3aB2RXC6 1390 aa20.77■□□□□ 0.91
Sort1-203ENSMUST00000135636 Duxf3A0A0N4SV92 674 aa20.77■□□□□ 0.91
Sort1-203ENSMUST00000135636 Fam47cQ14BE7 430 aa20.77■□□□□ 0.91
Sort1-203ENSMUST00000135636 Ctr9Q62018 1173 aaKnown RBP20.77■□□□□ 0.91
Sort1-203ENSMUST00000135636 Ak2Q9WTP6 239 aa20.77■□□□□ 0.91
Sort1-203ENSMUST00000135636 Styxl1Q9DAR2 321 aa20.76■□□□□ 0.91
Sort1-203ENSMUST00000135636 Tbc1d9bQ5SVR0 1263 aa20.76■□□□□ 0.91
Sort1-203ENSMUST00000135636 Idi1P58044 227 aa20.76■□□□□ 0.91
Sort1-203ENSMUST00000135636 Vps37cQ8R105 352 aa20.76■□□□□ 0.91
Sort1-203ENSMUST00000135636 Ppp2r5dQ91V89 594 aa20.76■□□□□ 0.91
Sort1-203ENSMUST00000135636 Traf1P39428 409 aa20.76■□□□□ 0.91
Sort1-203ENSMUST00000135636 FerP70451 823 aa20.76■□□□□ 0.91
Sort1-203ENSMUST00000135636 Mphosph8Q3TYA6 858 aaKnown RBP20.76■□□□□ 0.91
Sort1-203ENSMUST00000135636 Tor1aip1Q921T2 595 aaKnown RBP20.76■□□□□ 0.91
Sort1-203ENSMUST00000135636 Ankrd26Q811D2 1581 aa20.76■□□□□ 0.91
Sort1-203ENSMUST00000135636 NpcdF8VQB8 469 aa20.76■□□□□ 0.91
Retrieved 100 of 22,080 RNA–protein pairs in 40.5 ms