RNA–Protein interactions for RNA: ENSMUST00000040089.4

Rnf43-201, Transcript of E3 ubiquitin-protein ligase RNF43, mousemouse

TSL 1 (best) BASIC

Gene Rnf43, Length 3,670 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf43-201ENSMUST00000040089 Bloc1s2Q9CWG9 143 aa10.73□□□□□ -0.69
Rnf43-201ENSMUST00000040089 Wdr33Q8K4P0 1330 aaKnown RBP10.73□□□□□ -0.69
Rnf43-201ENSMUST00000040089 Flt4P35917 1363 aa10.73□□□□□ -0.69
Rnf43-201ENSMUST00000040089 Usp5P56399 858 aaKnown RBP10.73□□□□□ -0.69
Rnf43-201ENSMUST00000040089 Tekt3Q6X6Z7 490 aa10.73□□□□□ -0.69
Rnf43-201ENSMUST00000040089 Mxd3Q80US8 206 aa10.73□□□□□ -0.69
Rnf43-201ENSMUST00000040089 Ccdc162pQ0VG85 912 aa10.72□□□□□ -0.69
Rnf43-201ENSMUST00000040089 U2af1l4Q8BGJ9 220 aa10.72□□□□□ -0.69
Rnf43-201ENSMUST00000040089 Ercc6lQ8BHK9 1240 aa10.72□□□□□ -0.69
Rnf43-201ENSMUST00000040089 Pold4Q9CWP8 107 aa10.72□□□□□ -0.69
Rnf43-201ENSMUST00000040089 Rad50P70388 1312 aa10.72□□□□□ -0.69
Rnf43-201ENSMUST00000040089 Atp1a3Q6PIC6 1013 aa10.72□□□□□ -0.69
Rnf43-201ENSMUST00000040089 Asap2Q7SIG6 958 aa10.72□□□□□ -0.69
Rnf43-201ENSMUST00000040089 Ift57Q8BXG3 429 aa10.72□□□□□ -0.69
Rnf43-201ENSMUST00000040089 Kri1Q8VDQ9 704 aaKnown RBP10.72□□□□□ -0.69
Rnf43-201ENSMUST00000040089 Rbm43Q99J64 343 aa10.72□□□□□ -0.69
Rnf43-201ENSMUST00000040089 CenpqQ9CPQ5 267 aa10.72□□□□□ -0.69
Rnf43-201ENSMUST00000040089 WtapQ9ER69 396 aa10.72□□□□□ -0.69
Rnf43-201ENSMUST00000040089 IcoslgQ9JHJ8 322 aa10.72□□□□□ -0.69
Rnf43-201ENSMUST00000040089 Mast3Q3U214 1321 aa10.72□□□□□ -0.69
Rnf43-201ENSMUST00000040089 Rimbp3Q3V0F0 1606 aa10.72□□□□□ -0.69
Rnf43-201ENSMUST00000040089 Calcoco2A2A6M5 331 aa10.72□□□□□ -0.69
Rnf43-201ENSMUST00000040089 Dnm1P39053 867 aa10.72□□□□□ -0.69
Rnf43-201ENSMUST00000040089 Tyro3P55144 880 aa10.72□□□□□ -0.69
Rnf43-201ENSMUST00000040089 Limch1Q3UH68 1057 aa10.72□□□□□ -0.69
Rnf43-201ENSMUST00000040089 Wdr93Q402B2 695 aa10.72□□□□□ -0.69
Rnf43-201ENSMUST00000040089 Triml1Q8BVP1 470 aa10.72□□□□□ -0.69
Rnf43-201ENSMUST00000040089 Efcc1Q9JJF6 558 aa10.72□□□□□ -0.69
Rnf43-201ENSMUST00000040089 Hmg20bQ9Z104 317 aa10.72□□□□□ -0.69
Rnf43-201ENSMUST00000040089 Mybbp1aQ7TPV4 1344 aaKnown RBP10.72□□□□□ -0.69
Rnf43-201ENSMUST00000040089 Ube4aE9Q735 1028 aa10.71□□□□□ -0.69
Rnf43-201ENSMUST00000040089 Vps33bP59016 617 aa10.71□□□□□ -0.69
Rnf43-201ENSMUST00000040089 Fam228bQ497Q6 232 aa10.71□□□□□ -0.69
Rnf43-201ENSMUST00000040089 Rnf41Q8BH75 317 aa10.71□□□□□ -0.69
Rnf43-201ENSMUST00000040089 Trim29Q8R2Q0 587 aa10.71□□□□□ -0.69
Rnf43-201ENSMUST00000040089 Gm29094F6Q785 221 aa10.71□□□□□ -0.69
Rnf43-201ENSMUST00000040089 Prl3d1P18121 224 aa10.71□□□□□ -0.69
Rnf43-201ENSMUST00000040089 Anp32eP97822 260 aaKnown RBP10.71□□□□□ -0.69
Rnf43-201ENSMUST00000040089 Fnbp4Q6ZQ03 1031 aa10.71□□□□□ -0.69
Rnf43-201ENSMUST00000040089 Mrpl50Q8VDT9 159 aaKnown RBP10.71□□□□□ -0.69
Rnf43-201ENSMUST00000040089 Ppp4r3bQ922R5 820 aa10.71□□□□□ -0.69
Rnf43-201ENSMUST00000040089 Osbpl5Q9ER64 874 aa10.71□□□□□ -0.69
Rnf43-201ENSMUST00000040089 Camta1A2A891 1682 aa10.71□□□□□ -0.7
Rnf43-201ENSMUST00000040089 Elmsan1E9Q2I4 1089 aaKnown RBP10.71□□□□□ -0.7
Rnf43-201ENSMUST00000040089 Hspd1P63038 573 aaKnown RBP10.71□□□□□ -0.7
Rnf43-201ENSMUST00000040089 Me3Q8BMF3 604 aa10.71□□□□□ -0.7
Rnf43-201ENSMUST00000040089 E4f1Q8CCE9 783 aa10.71□□□□□ -0.7
Rnf43-201ENSMUST00000040089 Stn1Q8K2X3 378 aa10.71□□□□□ -0.7
Rnf43-201ENSMUST00000040089 Cd248Q91V98 765 aa10.71□□□□□ -0.7
Rnf43-201ENSMUST00000040089 Igbp1bQ9QZ29 343 aa10.71□□□□□ -0.7
Rnf43-201ENSMUST00000040089 Chd2E9PZM4 1827 aaKnown RBP10.7□□□□□ -0.7
Rnf43-201ENSMUST00000040089 Tpm1P58771 284 aa10.7□□□□□ -0.7
Rnf43-201ENSMUST00000040089 Ncf1Q09014 390 aa10.7□□□□□ -0.7
Rnf43-201ENSMUST00000040089 Nlrp9bQ66X22 1003 aa10.7□□□□□ -0.7
Rnf43-201ENSMUST00000040089 Zfp397Q7TNK4 527 aa10.7□□□□□ -0.7
Rnf43-201ENSMUST00000040089 Zscan22Q8BGS5 496 aa10.7□□□□□ -0.7
Rnf43-201ENSMUST00000040089 Afg3l2Q8JZQ2 802 aaKnown RBP10.7□□□□□ -0.7
Rnf43-201ENSMUST00000040089 Gm4340L7N2C4 268 aa10.7□□□□□ -0.7
Rnf43-201ENSMUST00000040089 Prkg1P0C605 671 aa10.7□□□□□ -0.7
Rnf43-201ENSMUST00000040089 Trim25Q61510 634 aaKnown RBP10.7□□□□□ -0.7
Rnf43-201ENSMUST00000040089 Rbm15bQ6PHZ5 887 aaKnown RBP10.7□□□□□ -0.7
Rnf43-201ENSMUST00000040089 Wdr24Q8CFJ9 790 aa10.7□□□□□ -0.7
Rnf43-201ENSMUST00000040089 Inpp5bQ8K337 993 aa10.7□□□□□ -0.7
Rnf43-201ENSMUST00000040089 Tubb6Q922F4 447 aa10.7□□□□□ -0.7
Rnf43-201ENSMUST00000040089 Znf704Q9ERQ3 566 aa10.7□□□□□ -0.7
Rnf43-201ENSMUST00000040089 Tuft1O08970 390 aa10.7□□□□□ -0.7
Rnf43-201ENSMUST00000040089 GabrdP22933 449 aa10.7□□□□□ -0.7
Rnf43-201ENSMUST00000040089 Dynll1P63168 89 aa10.7□□□□□ -0.7
Rnf43-201ENSMUST00000040089 Znf496Q5SXI5 585 aa10.7□□□□□ -0.7
Rnf43-201ENSMUST00000040089 Znf653Q6YND2 615 aa10.7□□□□□ -0.7
Rnf43-201ENSMUST00000040089 Ift74Q8BKE9 600 aa10.7□□□□□ -0.7
Rnf43-201ENSMUST00000040089 Uba5Q8VE47 403 aa10.7□□□□□ -0.7
Rnf43-201ENSMUST00000040089 Arid4aF8VPQ2 1261 aaKnown RBP10.69□□□□□ -0.7
Rnf43-201ENSMUST00000040089 Cep131Q62036 1060 aa10.69□□□□□ -0.7
Rnf43-201ENSMUST00000040089 Acap3Q6NXL5 833 aa10.69□□□□□ -0.7
Rnf43-201ENSMUST00000040089 Cep135Q6P5D4 1140 aa10.69□□□□□ -0.7
Rnf43-201ENSMUST00000040089 Sept9Q80UG5 583 aa10.69□□□□□ -0.7
Rnf43-201ENSMUST00000040089 Cdc45Q9Z1X9 566 aa10.69□□□□□ -0.7
Rnf43-201ENSMUST00000040089 Kif20bQ80WE4 1774 aaKnown RBP10.69□□□□□ -0.7
Rnf43-201ENSMUST00000040089 Olfr247E9PVJ7 320 aa10.69□□□□□ -0.7
Rnf43-201ENSMUST00000040089 Card6E9PWH2 1175 aa10.69□□□□□ -0.7
Rnf43-201ENSMUST00000040089 Olfr819K7N727 320 aa10.69□□□□□ -0.7
Rnf43-201ENSMUST00000040089 Oxsr1Q6P9R2 527 aa10.69□□□□□ -0.7
Rnf43-201ENSMUST00000040089 Slu7Q8BHJ9 585 aa10.69□□□□□ -0.7
Rnf43-201ENSMUST00000040089 4930548H24RikQ9D496 437 aa10.69□□□□□ -0.7
Rnf43-201ENSMUST00000040089 Syt10Q9R0N4 523 aa10.69□□□□□ -0.7
Rnf43-201ENSMUST00000040089 Atp10bB1AWN4 1474 aa10.69□□□□□ -0.7
Rnf43-201ENSMUST00000040089 Snapc4Q8BP86 1333 aa10.69□□□□□ -0.7
Rnf43-201ENSMUST00000040089 Prdm11A2AGX3 565 aa10.69□□□□□ -0.7
Rnf43-201ENSMUST00000040089 Zscan29E9Q5B4 869 aa10.69□□□□□ -0.7
Rnf43-201ENSMUST00000040089 Cd22P35329 862 aa10.69□□□□□ -0.7
Rnf43-201ENSMUST00000040089 Cdkl5Q3UTQ8 938 aa10.69□□□□□ -0.7
Rnf43-201ENSMUST00000040089 Gnl2Q99LH1 728 aaKnown RBP10.69□□□□□ -0.7
Rnf43-201ENSMUST00000040089 Ehd4Q9EQP2 541 aa10.69□□□□□ -0.7
Rnf43-201ENSMUST00000040089 Zkscan5Q9Z1D8 819 aa10.69□□□□□ -0.7
Rnf43-201ENSMUST00000040089 Gm30191A0A0U1RNT7 187 aa10.68□□□□□ -0.7
Rnf43-201ENSMUST00000040089 NefhP19246 1090 aa10.68□□□□□ -0.7
Rnf43-201ENSMUST00000040089 Il15P48346 162 aa10.68□□□□□ -0.7
Rnf43-201ENSMUST00000040089 MycbpapQ5SUV2 932 aa10.68□□□□□ -0.7
Rnf43-201ENSMUST00000040089 DlatQ8BMF4 642 aa10.68□□□□□ -0.7
Retrieved 100 of 22,080 RNA–protein pairs in 57.4 ms