RNA–Protein interactions for RNA: ENSMUST00000034776.12

Cln6-201, Transcript of Ceroid-lipofuscinosis, neuronal 6, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cln6, Length 2,142 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cln6-201ENSMUST00000034776 Ubash3aQ3V3E1 624 aa27■■□□□ 1.91
Cln6-201ENSMUST00000034776 Tpcn2Q8BWC0 731 aa27■■□□□ 1.91
Cln6-201ENSMUST00000034776 PtmaP26350 111 aa26.99■■□□□ 1.91
Cln6-201ENSMUST00000034776 Samm50Q8BGH2 469 aa26.99■■□□□ 1.91
Cln6-201ENSMUST00000034776 R3hcc1Q8BSI6 488 aa26.99■■□□□ 1.91
Cln6-201ENSMUST00000034776 Sil1Q9EPK6 465 aa26.99■■□□□ 1.91
Cln6-201ENSMUST00000034776 Ccdc174Q3U155 467 aa26.99■■□□□ 1.91
Cln6-201ENSMUST00000034776 A0A1W2P7S8 802 aa26.98■■□□□ 1.91
Cln6-201ENSMUST00000034776 Ubap1lG3UW59 384 aa26.98■■□□□ 1.91
Cln6-201ENSMUST00000034776 Pde6aP27664 859 aa26.98■■□□□ 1.91
Cln6-201ENSMUST00000034776 Ppfia3P60469 1194 aa26.98■■□□□ 1.91
Cln6-201ENSMUST00000034776 Prdm1Q60636 856 aa26.98■■□□□ 1.91
Cln6-201ENSMUST00000034776 Agtpbp1Q641K1 1218 aa26.98■■□□□ 1.91
Cln6-201ENSMUST00000034776 Cdc5lQ6A068 802 aaKnown RBP26.98■■□□□ 1.91
Cln6-201ENSMUST00000034776 Sh3tc1G3X9F6 1346 aa26.98■■□□□ 1.91
Cln6-201ENSMUST00000034776 Ppp1r21Q3TDD9 780 aa26.98■■□□□ 1.91
Cln6-201ENSMUST00000034776 Tbc1d30Q69ZT9 766 aa26.98■■□□□ 1.91
Cln6-201ENSMUST00000034776 Phf14Q9D4H9 881 aa26.98■■□□□ 1.91
Cln6-201ENSMUST00000034776 Krt85Q9Z2T6 507 aa26.98■■□□□ 1.91
Cln6-201ENSMUST00000034776 Slc44a1Q6X893 653 aa26.97■■□□□ 1.91
Cln6-201ENSMUST00000034776 Col11a2Q64739 1736 aa26.97■■□□□ 1.91
Cln6-201ENSMUST00000034776 Cd3dP04235 173 aa26.96■■□□□ 1.91
Cln6-201ENSMUST00000034776 Atxn2lQ7TQH0 1049 aaKnown RBP26.96■■□□□ 1.91
Cln6-201ENSMUST00000034776 CgnP59242 1191 aa26.96■■□□□ 1.91
Cln6-201ENSMUST00000034776 Ifit1Q64282 463 aa26.96■■□□□ 1.91
Cln6-201ENSMUST00000034776 Dydc2Q9D3X8 139 aa26.96■■□□□ 1.91
Cln6-201ENSMUST00000034776 Ndufa8Q9DCJ5 172 aa26.96■■□□□ 1.91
Cln6-201ENSMUST00000034776 Zbtb22Q9Z0G7 638 aa26.96■■□□□ 1.91
Cln6-201ENSMUST00000034776 Mapkapk5O54992 473 aa26.95■■□□□ 1.91
Cln6-201ENSMUST00000034776 Cnnm2Q3TWN3 875 aa26.95■■□□□ 1.91
Cln6-201ENSMUST00000034776 Stag1Q9D3E6 1258 aa26.95■■□□□ 1.91
Cln6-201ENSMUST00000034776 Gm20425E9Q035 978 aaKnown RBP26.95■■□□□ 1.9
Cln6-201ENSMUST00000034776 Cyp26a1O55127 497 aa26.95■■□□□ 1.9
Cln6-201ENSMUST00000034776 SrprbP47758 269 aa26.95■■□□□ 1.9
Cln6-201ENSMUST00000034776 Csrnp1P59054 583 aa26.95■■□□□ 1.9
Cln6-201ENSMUST00000034776 Gm5592Q3V0A6 857 aa26.95■■□□□ 1.9
Cln6-201ENSMUST00000034776 Casc1Q6TDU8 730 aa26.95■■□□□ 1.9
Cln6-201ENSMUST00000034776 U2af1l4Q8BGJ9 220 aa26.95■■□□□ 1.9
Cln6-201ENSMUST00000034776 Rbm33Q9CXK9 1231 aaKnown RBP26.95■■□□□ 1.9
Cln6-201ENSMUST00000034776 Dennd3A2RT67 1274 aa26.94■■□□□ 1.9
Cln6-201ENSMUST00000034776 LyarQ08288 388 aaKnown RBP26.94■■□□□ 1.9
Cln6-201ENSMUST00000034776 Ccdc82Q6PG04 518 aa26.94■■□□□ 1.9
Cln6-201ENSMUST00000034776 Kdm4aQ8BW72 1064 aa26.94■■□□□ 1.9
Cln6-201ENSMUST00000034776 Slurp2P0DP59 97 aa26.93■■□□□ 1.9
Cln6-201ENSMUST00000034776 FosbP13346 338 aa26.93■■□□□ 1.9
Cln6-201ENSMUST00000034776 Q3TYL0 343 aa26.93■■□□□ 1.9
Cln6-201ENSMUST00000034776 Terf2ipQ91VL8 393 aa26.93■■□□□ 1.9
Cln6-201ENSMUST00000034776 SrrtQ99MR6 875 aaKnown RBP26.93■■□□□ 1.9
Cln6-201ENSMUST00000034776 Strip1Q8C079 837 aa26.93■■□□□ 1.9
Cln6-201ENSMUST00000034776 Slc14a2Q8R4T9 930 aa26.93■■□□□ 1.9
Cln6-201ENSMUST00000034776 Slfn1Q9Z0I7 337 aa26.93■■□□□ 1.9
Cln6-201ENSMUST00000034776 Kcnn1Q9EQR3 537 aa26.92■■□□□ 1.9
Cln6-201ENSMUST00000034776 Lnx1O70263 728 aa26.92■■□□□ 1.9
Cln6-201ENSMUST00000034776 Vars2Q3U2A8 1060 aa26.92■■□□□ 1.9
Cln6-201ENSMUST00000034776 Bola3Q8CEI1 110 aa26.92■■□□□ 1.9
Cln6-201ENSMUST00000034776 Sumf1Q8R0F3 372 aa26.92■■□□□ 1.9
Cln6-201ENSMUST00000034776 Letm1Q9Z2I0 738 aa26.92■■□□□ 1.9
Cln6-201ENSMUST00000034776 Cfap69Q8BH53 942 aa26.91■■□□□ 1.9
Cln6-201ENSMUST00000034776 DymQ8CHY3 669 aa26.91■■□□□ 1.9
Cln6-201ENSMUST00000034776 Pcmtd1P59913 357 aa26.9■■□□□ 1.9
Cln6-201ENSMUST00000034776 Dynll1P63168 89 aa26.9■■□□□ 1.9
Cln6-201ENSMUST00000034776 Mtmr3Q8K296 1196 aa26.9■■□□□ 1.9
Cln6-201ENSMUST00000034776 Rbm5Q91YE7 815 aaKnown RBP26.9■■□□□ 1.9
Cln6-201ENSMUST00000034776 PdcQ9QW08 244 aa26.9■■□□□ 1.9
Cln6-201ENSMUST00000034776 Spata31d1bE9QA57 1361 aa26.9■■□□□ 1.9
Cln6-201ENSMUST00000034776 Rgs12Q8CGE9 1381 aa26.9■■□□□ 1.9
Cln6-201ENSMUST00000034776 Aox3G3X982 1335 aa26.9■■□□□ 1.9
Cln6-201ENSMUST00000034776 Naaladl2A0A0N4SUJ3 795 aa26.9■■□□□ 1.9
Cln6-201ENSMUST00000034776 Metap2O08663 478 aaKnown RBP26.9■■□□□ 1.9
Cln6-201ENSMUST00000034776 Hmgb2P30681 210 aaKnown RBP26.9■■□□□ 1.9
Cln6-201ENSMUST00000034776 Pim2Q62070 370 aa26.9■■□□□ 1.9
Cln6-201ENSMUST00000034776 VmacQ8BP01 174 aa26.9■■□□□ 1.9
Cln6-201ENSMUST00000034776 Paf1Q8K2T8 535 aa26.9■■□□□ 1.9
Cln6-201ENSMUST00000034776 Rcan1Q9JHG6 198 aa26.9■■□□□ 1.9
Cln6-201ENSMUST00000034776 Ltn1Q6A009 1767 aa26.89■■□□□ 1.9
Cln6-201ENSMUST00000034776 Pde11aP0C1Q2 933 aa26.89■■□□□ 1.9
Cln6-201ENSMUST00000034776 E4f1Q8CCE9 783 aa26.89■■□□□ 1.9
Cln6-201ENSMUST00000034776 Mknk2Q8CDB0 459 aa26.89■■□□□ 1.9
Cln6-201ENSMUST00000034776 Sirt2Q8VDQ8 389 aa26.89■■□□□ 1.9
Cln6-201ENSMUST00000034776 Pla2g12bQ99P27 195 aa26.89■■□□□ 1.9
Cln6-201ENSMUST00000034776 Ccdc47Q9D024 483 aaKnown RBP26.89■■□□□ 1.9
Cln6-201ENSMUST00000034776 Akt1s1Q9D1F4 257 aa26.89■■□□□ 1.9
Cln6-201ENSMUST00000034776 Bnip3O55003 187 aa26.89■■□□□ 1.89
Cln6-201ENSMUST00000034776 TrhQ62361 256 aa26.89■■□□□ 1.89
Cln6-201ENSMUST00000034776 Hps6Q8BLY7 805 aa26.89■■□□□ 1.89
Cln6-201ENSMUST00000034776 Ttc12Q8BW49 704 aa26.89■■□□□ 1.89
Cln6-201ENSMUST00000034776 Snapc4Q8BP86 1333 aa26.88■■□□□ 1.89
Cln6-201ENSMUST00000034776 Myh13B1AR69 1938 aa26.88■■□□□ 1.89
Cln6-201ENSMUST00000034776 Me1P06801 572 aa26.88■■□□□ 1.89
Cln6-201ENSMUST00000034776 NfixP70257 488 aa26.88■■□□□ 1.89
Cln6-201ENSMUST00000034776 Kiaa0319Q5SZV5 1081 aa26.88■■□□□ 1.89
Cln6-201ENSMUST00000034776 Olfr118Q7TRJ6 321 aa26.88■■□□□ 1.89
Cln6-201ENSMUST00000034776 Cfap99A0A140LIX9 648 aa26.87■■□□□ 1.89
Cln6-201ENSMUST00000034776 Fam83bQ0VBM2 1012 aa26.87■■□□□ 1.89
Cln6-201ENSMUST00000034776 Usp28Q5I043 1051 aa26.87■■□□□ 1.89
Cln6-201ENSMUST00000034776 Myl10Q62082 202 aa26.87■■□□□ 1.89
Cln6-201ENSMUST00000034776 Tex2Q6ZPJ0 1128 aaKnown RBP26.87■■□□□ 1.89
Cln6-201ENSMUST00000034776 Rnf41Q8BH75 317 aa26.87■■□□□ 1.89
Cln6-201ENSMUST00000034776 Sugp2Q8CH09 1067 aa26.87■■□□□ 1.89
Cln6-201ENSMUST00000034776 CpdO89001 1377 aa26.87■■□□□ 1.89
Retrieved 100 of 22,080 RNA–protein pairs in 528 ms