RNA–Protein interactions for RNA: ENST00000641927.1

PHGDH-230, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,678 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-230ENST00000641927 TAGLNQ01995 201 aaKnown RBP14.07□□□□□ -0.16
PHGDH-230ENST00000641927 TMEM187Q14656 261 aa14.07□□□□□ -0.16
PHGDH-230ENST00000641927 LIN54Q6MZP7 749 aa14.07□□□□□ -0.16
PHGDH-230ENST00000641927 TCTEX1D1Q8N7M0 179 aa14.07□□□□□ -0.16
PHGDH-230ENST00000641927 OR4S2Q8NH73 311 aa14.07□□□□□ -0.16
PHGDH-230ENST00000641927 GLYATL2Q8WU03 294 aa14.07□□□□□ -0.16
PHGDH-230ENST00000641927 MDFIC2A0A1B0GVS7 189 aa14.07□□□□□ -0.16
PHGDH-230ENST00000641927 DUS4LO95620 317 aaKnown RBP14.07□□□□□ -0.16
PHGDH-230ENST00000641927 IGKV1-16P04430 117 aa14.07□□□□□ -0.16
PHGDH-230ENST00000641927 RRASP10301 218 aa14.07□□□□□ -0.16
PHGDH-230ENST00000641927 BRWD1-AS2P59051 145 aa14.07□□□□□ -0.16
PHGDH-230ENST00000641927 HES1Q14469 280 aa14.07□□□□□ -0.16
PHGDH-230ENST00000641927 DEFB112Q30KQ8 113 aa14.07□□□□□ -0.16
PHGDH-230ENST00000641927 ANKRD55Q3KP44 614 aa14.07□□□□□ -0.16
PHGDH-230ENST00000641927 PDPNQ86YL7 162 aa14.07□□□□□ -0.16
PHGDH-230ENST00000641927 ZNF695Q8IW36 515 aa14.07□□□□□ -0.16
PHGDH-230ENST00000641927 COQ8AQ8NI60 647 aa14.07□□□□□ -0.16
PHGDH-230ENST00000641927 PHB2Q99623 299 aa14.07□□□□□ -0.16
PHGDH-230ENST00000641927 SSNA1O43805 119 aa14.06□□□□□ -0.16
PHGDH-230ENST00000641927 S1PR2O95136 353 aa14.06□□□□□ -0.16
PHGDH-230ENST00000641927 IGKV1D-33P01593 117 aa14.06□□□□□ -0.16
PHGDH-230ENST00000641927 IGKV1-33P01594 117 aa14.06□□□□□ -0.16
PHGDH-230ENST00000641927 UCP1P25874 307 aa14.06□□□□□ -0.16
PHGDH-230ENST00000641927 ZNF585BQ52M93 769 aa14.06□□□□□ -0.16
PHGDH-230ENST00000641927 TMEM268Q5VZI3 342 aa14.06□□□□□ -0.16
PHGDH-230ENST00000641927 LIAT1Q6ZQX7 453 aa14.06□□□□□ -0.16
PHGDH-230ENST00000641927 CFHR4Q92496 578 aa14.06□□□□□ -0.16
PHGDH-230ENST00000641927 ZDHHC16Q969W1 377 aa14.06□□□□□ -0.16
PHGDH-230ENST00000641927 FLYWCH2Q96CP2 140 aaKnown RBP14.06□□□□□ -0.16
PHGDH-230ENST00000641927 TMEM160Q9NX00 188 aa14.06□□□□□ -0.16
PHGDH-230ENST00000641927 HIVEP1P15822 2718 aa14.06□□□□□ -0.16
PHGDH-230ENST00000641927 SNRPGP15A8MWD9 76 aa14.05□□□□□ -0.16
PHGDH-230ENST00000641927 SHOXO15266 292 aa14.05□□□□□ -0.16
PHGDH-230ENST00000641927 HPRT1P00492 218 aa14.05□□□□□ -0.16
PHGDH-230ENST00000641927 SNRNP70P08621 437 aaKnown RBP14.05□□□□□ -0.16
PHGDH-230ENST00000641927 RPA2P15927 270 aa14.05□□□□□ -0.16
PHGDH-230ENST00000641927 CD1BP29016 333 aa14.05□□□□□ -0.16
PHGDH-230ENST00000641927 BCAP31P51572 246 aa14.05□□□□□ -0.16
PHGDH-230ENST00000641927 SRPXP78539 464 aa14.05□□□□□ -0.16
PHGDH-230ENST00000641927 HNF4GQ14541 408 aa14.05□□□□□ -0.16
PHGDH-230ENST00000641927 DHRS7BQ6IAN0 325 aaPredicted RBP14.05□□□□□ -0.16
PHGDH-230ENST00000641927 C9orf139Q6ZV77 190 aa14.05□□□□□ -0.16
PHGDH-230ENST00000641927 LGI3Q8N145 548 aa14.05□□□□□ -0.16
PHGDH-230ENST00000641927 MITD1Q8WV92 249 aa14.05□□□□□ -0.16
PHGDH-230ENST00000641927 SSX3Q99909 188 aa14.05□□□□□ -0.16
PHGDH-230ENST00000641927 MEGF9Q9H1U4 602 aa14.05□□□□□ -0.16
PHGDH-230ENST00000641927 OR51J1Q9H342 316 aa14.05□□□□□ -0.16
PHGDH-230ENST00000641927 C7orf66A4D0T2 115 aa14.04□□□□□ -0.16
PHGDH-230ENST00000641927 RBFOX2O43251 390 aaKnown RBP eCLIP14.04□□□□□ -0.167e-8■■□□□ 12.4
PHGDH-230ENST00000641927 VENTXO95231 258 aa14.04□□□□□ -0.16
PHGDH-230ENST00000641927 RPS16P62249 146 aaKnown RBP14.04□□□□□ -0.16
PHGDH-230ENST00000641927 HABP2Q14520 560 aaPredicted RBP14.04□□□□□ -0.16
PHGDH-230ENST00000641927 C12orf45Q8N5I9 185 aaPredicted RBP14.04□□□□□ -0.16
PHGDH-230ENST00000641927 OR4C13Q8NGP0 309 aa14.04□□□□□ -0.16
PHGDH-230ENST00000641927 RNASE11Q8TAA1 199 aaKnown RBP14.04□□□□□ -0.16
PHGDH-230ENST00000641927 LHFPL5Q8TAF8 219 aa14.04□□□□□ -0.16
PHGDH-230ENST00000641927 HARBI1Q96MB7 349 aa14.04□□□□□ -0.16
PHGDH-230ENST00000641927 FAM212BQ9NTI7 297 aaPredicted RBP14.04□□□□□ -0.16
PHGDH-230ENST00000641927 CDS2O95674 445 aa14.04□□□□□ -0.16
PHGDH-230ENST00000641927 KRASP01116 189 aa14.04□□□□□ -0.16
PHGDH-230ENST00000641927 FAM106CPP0CH98 169 aa14.04□□□□□ -0.16
PHGDH-230ENST00000641927 LRRC75BQ2VPJ9 315 aa14.04□□□□□ -0.16
PHGDH-230ENST00000641927 RBPMSQ93062 196 aaKnown RBP14.04□□□□□ -0.16
PHGDH-230ENST00000641927 PLEKHA2Q9HB19 425 aa14.04□□□□□ -0.16
PHGDH-230ENST00000641927 CDC42EP3Q9UKI2 254 aa14.04□□□□□ -0.16
PHGDH-230ENST00000641927 SONP18583 2426 aaKnown RBP14.03□□□□□ -0.16
PHGDH-230ENST00000641927 MOSP00540 346 aa14.03□□□□□ -0.16
PHGDH-230ENST00000641927 G6PCP35575 357 aa14.03□□□□□ -0.16
PHGDH-230ENST00000641927 AKR1C2P52895 323 aa14.03□□□□□ -0.16
PHGDH-230ENST00000641927 SSX9Q7RTT3 188 aa14.03□□□□□ -0.16
PHGDH-230ENST00000641927 SELENOHQ8IZQ5 122 aaKnown RBP14.03□□□□□ -0.16
PHGDH-230ENST00000641927 VKORC1L1Q8N0U8 176 aa14.03□□□□□ -0.16
PHGDH-230ENST00000641927 SLC35G3Q8N808 338 aa14.03□□□□□ -0.16
PHGDH-230ENST00000641927 DMBX1Q8NFW5 382 aa14.03□□□□□ -0.16
PHGDH-230ENST00000641927 OR2T10Q8NGZ9 312 aa14.03□□□□□ -0.16
PHGDH-230ENST00000641927 R3HDM4Q96D70 268 aa14.03□□□□□ -0.16
PHGDH-230ENST00000641927 RITA1Q96K30 269 aa14.03□□□□□ -0.16
PHGDH-230ENST00000641927 TMEM56Q96MV1 263 aa14.03□□□□□ -0.16
PHGDH-230ENST00000641927 TMEM56-RWDD3S4R434 201 aa14.03□□□□□ -0.16
PHGDH-230ENST00000641927 INAFM1C9JVW0 142 aa14.02□□□□□ -0.16
PHGDH-230ENST00000641927 H3BUX3 64 aa14.02□□□□□ -0.16
PHGDH-230ENST00000641927 PFDN1O60925 122 aa14.02□□□□□ -0.16
PHGDH-230ENST00000641927 HRASP01112 189 aa14.02□□□□□ -0.16
PHGDH-230ENST00000641927 IGKV1-39P01597 117 aa14.02□□□□□ -0.16
PHGDH-230ENST00000641927 IGKV1D-39P04432 117 aa14.02□□□□□ -0.16
PHGDH-230ENST00000641927 HOXB5P09067 269 aa14.02□□□□□ -0.16
PHGDH-230ENST00000641927 NQO2P16083 231 aa14.02□□□□□ -0.16
PHGDH-230ENST00000641927 TMEM11P17152 192 aa14.02□□□□□ -0.16
PHGDH-230ENST00000641927 SRD5A1P18405 259 aa14.02□□□□□ -0.16
PHGDH-230ENST00000641927 ERVK-16P61578 105 aa14.02□□□□□ -0.16
PHGDH-230ENST00000641927 TMEM177Q53S58 311 aa14.02□□□□□ -0.16
PHGDH-230ENST00000641927 LYZL2Q7Z4W2 148 aa14.02□□□□□ -0.16
PHGDH-230ENST00000641927 CADM3Q8N126 398 aa14.02□□□□□ -0.16
PHGDH-230ENST00000641927 OSR1Q8TAX0 266 aaPredicted RBP14.02□□□□□ -0.16
PHGDH-230ENST00000641927 EAF1Q96JC9 268 aaPredicted RBP14.02□□□□□ -0.16
PHGDH-230ENST00000641927 COMMD9Q9P000 198 aa14.02□□□□□ -0.16
PHGDH-230ENST00000641927 MARCH11A6NNE9 402 aa14.01□□□□□ -0.17
PHGDH-230ENST00000641927 ATG12O94817 140 aa14.01□□□□□ -0.17
PHGDH-230ENST00000641927 SCGB2A2Q13296 93 aa14.01□□□□□ -0.17
PHGDH-230ENST00000641927 IL22RA2Q969J5 263 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms