RNA–Protein interactions for RNA: ENST00000641847.1

PHGDH-228, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 692 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-228ENST00000641847 VAMP1P23763 118 aa7.56□□□□□ -1.2
PHGDH-228ENST00000641847 DUTP33316 252 aaKnown RBP7.56□□□□□ -1.2
PHGDH-228ENST00000641847 THBS3P49746 956 aa7.56□□□□□ -1.2
PHGDH-228ENST00000641847 MECP2P51608 486 aaKnown RBP7.56□□□□□ -1.2
PHGDH-228ENST00000641847 RAG2P55895 527 aa7.56□□□□□ -1.2
PHGDH-228ENST00000641847 UBE2MP61081 183 aaKnown RBP7.56□□□□□ -1.2
PHGDH-228ENST00000641847 RPL30P62888 115 aaKnown RBP7.56□□□□□ -1.2
PHGDH-228ENST00000641847 ZNF816Q0VGE8 651 aaPredicted RBP7.56□□□□□ -1.2
PHGDH-228ENST00000641847 PPP1R1AQ13522 171 aa7.56□□□□□ -1.2
PHGDH-228ENST00000641847 C4orf46Q504U0 113 aa7.56□□□□□ -1.2
PHGDH-228ENST00000641847 OR2B11Q5JQS5 317 aa7.56□□□□□ -1.2
PHGDH-228ENST00000641847 GLDNQ6ZMI3 551 aaPredicted RBP7.56□□□□□ -1.2
PHGDH-228ENST00000641847 ZNF66Q6ZN08 573 aa7.56□□□□□ -1.2
PHGDH-228ENST00000641847 SGPP2Q8IWX5 399 aa7.56□□□□□ -1.2
PHGDH-228ENST00000641847 C17orf50Q8WW18 174 aa7.56□□□□□ -1.2
PHGDH-228ENST00000641847 HSD17B10Q99714 261 aaKnown RBP7.56□□□□□ -1.2
PHGDH-228ENST00000641847 NABP2Q9BQ15 211 aa7.56□□□□□ -1.2
PHGDH-228ENST00000641847 HILPDAQ9Y5L2 63 aa7.56□□□□□ -1.2
PHGDH-228ENST00000641847 A0A0B4J293 547 aa7.55□□□□□ -1.2
PHGDH-228ENST00000641847 IGHV1-3A0A0C4DH29 117 aa7.55□□□□□ -1.2
PHGDH-228ENST00000641847 A0A0U1RQK1 487 aa7.55□□□□□ -1.2
PHGDH-228ENST00000641847 C3orf85A0A1B0GTC6 90 aa7.55□□□□□ -1.2
PHGDH-228ENST00000641847 A0A1W2PPI3 338 aa7.55□□□□□ -1.2
PHGDH-228ENST00000641847 OOSP1A8MZH6 123 aa7.55□□□□□ -1.2
PHGDH-228ENST00000641847 H0Y980 276 aa7.55□□□□□ -1.2
PHGDH-228ENST00000641847 H0YJW9 148 aa7.55□□□□□ -1.2
PHGDH-228ENST00000641847 SFT2D2O95562 160 aa7.55□□□□□ -1.2
PHGDH-228ENST00000641847 DHFRP00374 187 aa7.55□□□□□ -1.2
PHGDH-228ENST00000641847 HLA-AP01891 365 aaKnown RBP7.55□□□□□ -1.2
PHGDH-228ENST00000641847 APOA2P02652 100 aa7.55□□□□□ -1.2
PHGDH-228ENST00000641847 GAPDHP04406 335 aaKnown RBP7.55□□□□□ -1.2
PHGDH-228ENST00000641847 OR5AC1P0C628 307 aa7.55□□□□□ -1.2
PHGDH-228ENST00000641847 CT45A6P0DMU7 189 aa7.55□□□□□ -1.2
PHGDH-228ENST00000641847 CT45A5P0DMU8 189 aa7.55□□□□□ -1.2
PHGDH-228ENST00000641847 CT45A7P0DMV0 189 aa7.55□□□□□ -1.2
PHGDH-228ENST00000641847 ANXA3P12429 323 aa7.55□□□□□ -1.2
PHGDH-228ENST00000641847 F2RP25116 425 aa7.55□□□□□ -1.2
PHGDH-228ENST00000641847 PAX6P26367 422 aa7.55□□□□□ -1.2
PHGDH-228ENST00000641847 LINC00205P59089 165 aa7.55□□□□□ -1.2
PHGDH-228ENST00000641847 SUPT4H1P63272 117 aaKnown RBP7.55□□□□□ -1.2
PHGDH-228ENST00000641847 DHODHQ02127 395 aa7.55□□□□□ -1.2
PHGDH-228ENST00000641847 SRSF4Q08170 494 aaKnown RBP7.55□□□□□ -1.2
PHGDH-228ENST00000641847 DHRS2Q13268 280 aa7.55□□□□□ -1.2
PHGDH-228ENST00000641847 SSX2Q16385 188 aa7.55□□□□□ -1.2
PHGDH-228ENST00000641847 TMEM128Q5BJH2 165 aa7.55□□□□□ -1.2
PHGDH-228ENST00000641847 CCDC144NLQ6NUI1 221 aa7.55□□□□□ -1.2
PHGDH-228ENST00000641847 C11orf88Q6PI97 169 aa7.55□□□□□ -1.2
PHGDH-228ENST00000641847 ZNF383Q8NA42 475 aa7.55□□□□□ -1.2
PHGDH-228ENST00000641847 OR52B4Q8NGK2 314 aa7.55□□□□□ -1.2
PHGDH-228ENST00000641847 AJUBAQ96IF1 538 aa7.55□□□□□ -1.2
PHGDH-228ENST00000641847 ADTRPQ96IZ2 230 aa7.55□□□□□ -1.2
PHGDH-228ENST00000641847 TP53RKQ96S44 253 aa7.55□□□□□ -1.2
PHGDH-228ENST00000641847 SEC22CQ9BRL7 303 aa7.55□□□□□ -1.2
PHGDH-228ENST00000641847 PRR13Q9NZ81 148 aa7.55□□□□□ -1.2
PHGDH-228ENST00000641847 C9orf170A2RU37 121 aa7.54□□□□□ -1.2
PHGDH-228ENST00000641847 CLPSL1A2RUU4 121 aa7.54□□□□□ -1.2
PHGDH-228ENST00000641847 PRAF2O60831 178 aa7.54□□□□□ -1.2
PHGDH-228ENST00000641847 FCGR3BO75015 233 aa7.54□□□□□ -1.2
PHGDH-228ENST00000641847 IL5P05113 134 aa7.54□□□□□ -1.2
PHGDH-228ENST00000641847 KIR2DS2P43631 304 aa7.54□□□□□ -1.2
PHGDH-228ENST00000641847 ARHGDIBP52566 201 aa7.54□□□□□ -1.2
PHGDH-228ENST00000641847 BPIFB3P59826 476 aa7.54□□□□□ -1.2
PHGDH-228ENST00000641847 TATDN3Q17R31 274 aa7.54□□□□□ -1.2
PHGDH-228ENST00000641847 C2orf68Q2NKX9 166 aa7.54□□□□□ -1.2
PHGDH-228ENST00000641847 SP6Q3SY56 376 aa7.54□□□□□ -1.2
PHGDH-228ENST00000641847 LYG2Q86SG7 212 aa7.54□□□□□ -1.2
PHGDH-228ENST00000641847 MOB3BQ86TA1 216 aa7.54□□□□□ -1.2
PHGDH-228ENST00000641847 SPAG16Q8N0X2 631 aa7.54□□□□□ -1.2
PHGDH-228ENST00000641847 OR8H3Q8N146 312 aa7.54□□□□□ -1.2
PHGDH-228ENST00000641847 DYNAPQ8N1N2 210 aa7.54□□□□□ -1.2
PHGDH-228ENST00000641847 OR5AN1Q8NGI8 311 aa7.54□□□□□ -1.2
PHGDH-228ENST00000641847 FAM110DQ8TAY7 271 aaPredicted RBP7.54□□□□□ -1.2
PHGDH-228ENST00000641847 CASTOR1Q8WTX7 329 aa7.54□□□□□ -1.2
PHGDH-228ENST00000641847 DDB2Q92466 427 aa7.54□□□□□ -1.2
PHGDH-228ENST00000641847 MALSU1Q96EH3 234 aa7.54□□□□□ -1.2
PHGDH-228ENST00000641847 GALNT14Q96FL9 552 aa7.54□□□□□ -1.2
PHGDH-228ENST00000641847 ALX4Q9H161 411 aaPredicted RBP7.54□□□□□ -1.2
PHGDH-228ENST00000641847 SLC35D1Q9NTN3 355 aa7.54□□□□□ -1.2
PHGDH-228ENST00000641847 PRELID3BQ9Y3B1 194 aa7.54□□□□□ -1.2
PHGDH-228ENST00000641847 WASHC3Q9Y3C0 194 aa7.54□□□□□ -1.2
PHGDH-228ENST00000641847 SOX21Q9Y651 276 aaPredicted RBP7.54□□□□□ -1.2
PHGDH-228ENST00000641847 ALG5Q9Y673 324 aa7.54□□□□□ -1.2
PHGDH-228ENST00000641847 IGHV3-72A0A0B4J1Y9 119 aa7.53□□□□□ -1.2
PHGDH-228ENST00000641847 MDFIC2A0A1B0GVS7 189 aa7.53□□□□□ -1.2
PHGDH-228ENST00000641847 FAM181BA6NEQ2 426 aa7.53□□□□□ -1.2
PHGDH-228ENST00000641847 H7C2Y5 167 aa7.53□□□□□ -1.2
PHGDH-228ENST00000641847 CREBL2O60519 120 aaPredicted RBP7.53□□□□□ -1.2
PHGDH-228ENST00000641847 RAMP3O60896 148 aa7.53□□□□□ -1.2
PHGDH-228ENST00000641847 B3GALNT1O75752 331 aa7.53□□□□□ -1.2
PHGDH-228ENST00000641847 RAB13P51153 203 aa7.53□□□□□ -1.2
PHGDH-228ENST00000641847 TAGLNQ01995 201 aaKnown RBP7.53□□□□□ -1.2
PHGDH-228ENST00000641847 CBX3Q13185 183 aa7.53□□□□□ -1.2
PHGDH-228ENST00000641847 RTL8BQ17RB0 113 aa7.53□□□□□ -1.2
PHGDH-228ENST00000641847 Q6ZNX1 250 aa7.53□□□□□ -1.2
PHGDH-228ENST00000641847 C9orf139Q6ZV77 190 aa7.53□□□□□ -1.2
PHGDH-228ENST00000641847 BCL6BQ8N143 479 aaPredicted RBP7.53□□□□□ -1.2
PHGDH-228ENST00000641847 OR4S2Q8NH73 311 aa7.53□□□□□ -1.2
PHGDH-228ENST00000641847 COQ8AQ8NI60 647 aa7.53□□□□□ -1.2
PHGDH-228ENST00000641847 MRAPQ8TCY5 172 aa7.53□□□□□ -1.2
PHGDH-228ENST00000641847 ZNF431Q8TF32 576 aaPredicted RBP7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms