RNA–Protein interactions for RNA: ENST00000641811.1

PHGDH-227, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,031 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-227ENST00000641811 RRASP10301 218 aa13.54□□□□□ -0.24
PHGDH-227ENST00000641811 LGALS7P47929 136 aa13.54□□□□□ -0.24
PHGDH-227ENST00000641811 RFX2P48378 723 aa13.54□□□□□ -0.24
PHGDH-227ENST00000641811 FXYD4P59646 89 aa13.54□□□□□ -0.24
PHGDH-227ENST00000641811 DEFA6Q01524 100 aa13.54□□□□□ -0.24
PHGDH-227ENST00000641811 CBX3Q13185 183 aa13.54□□□□□ -0.24
PHGDH-227ENST00000641811 EIF4EBP1Q13541 118 aaPredicted RBP13.54□□□□□ -0.24
PHGDH-227ENST00000641811 ECSCRQ19T08 205 aa13.54□□□□□ -0.24
PHGDH-227ENST00000641811 ETV3LQ6ZN32 361 aa13.54□□□□□ -0.24
PHGDH-227ENST00000641811 GPX8Q8TED1 209 aa13.54□□□□□ -0.24
PHGDH-227ENST00000641811 AP3S1Q92572 193 aa13.54□□□□□ -0.24
PHGDH-227ENST00000641811 KLK15Q9H2R5 256 aa13.54□□□□□ -0.24
PHGDH-227ENST00000641811 ZFP57Q9NU63 452 aa13.54□□□□□ -0.24
PHGDH-227ENST00000641811 EHFQ9NZC4 300 aa13.54□□□□□ -0.24
PHGDH-227ENST00000641811 FCGR3BO75015 233 aa13.53□□□□□ -0.24
PHGDH-227ENST00000641811 NAT1P18440 290 aa13.53□□□□□ -0.24
PHGDH-227ENST00000641811 PSMB8P28062 276 aa13.53□□□□□ -0.24
PHGDH-227ENST00000641811 TMBIM6P55061 237 aa13.53□□□□□ -0.24
PHGDH-227ENST00000641811 C19orf54Q5BKX5 351 aa13.53□□□□□ -0.24
PHGDH-227ENST00000641811 ZNF562Q6V9R5 426 aa13.53□□□□□ -0.24
PHGDH-227ENST00000641811 KCTD9Q7L273 389 aa13.53□□□□□ -0.24
PHGDH-227ENST00000641811 PPP1R27Q86WC6 154 aa13.53□□□□□ -0.24
PHGDH-227ENST00000641811 LYSMD2Q8IV50 215 aa13.53□□□□□ -0.24
PHGDH-227ENST00000641811 ZNF695Q8IW36 515 aa13.53□□□□□ -0.24
PHGDH-227ENST00000641811 RNF152Q8N8N0 203 aa13.53□□□□□ -0.24
PHGDH-227ENST00000641811 MINDY2Q8NBR6 621 aa13.53□□□□□ -0.24
PHGDH-227ENST00000641811 RAB2BQ8WUD1 216 aa13.53□□□□□ -0.24
PHGDH-227ENST00000641811 GIMAP1Q8WWP7 306 aa13.53□□□□□ -0.24
PHGDH-227ENST00000641811 DUX3Q96PT4 197 aa13.53□□□□□ -0.24
PHGDH-227ENST00000641811 SLC5A7Q9GZV3 580 aa13.53□□□□□ -0.24
PHGDH-227ENST00000641811 TAS2R8Q9NYW2 309 aa13.53□□□□□ -0.24
PHGDH-227ENST00000641811 NUBP2Q9Y5Y2 271 aa13.53□□□□□ -0.24
PHGDH-227ENST00000641811 ARPC1BO15143 372 aaKnown RBP13.52□□□□□ -0.25
PHGDH-227ENST00000641811 TNFSF12O43508 249 aa13.52□□□□□ -0.25
PHGDH-227ENST00000641811 SOX15O60248 233 aa13.52□□□□□ -0.25
PHGDH-227ENST00000641811 IGLV1-40P01703 118 aa13.52□□□□□ -0.25
PHGDH-227ENST00000641811 HLA-DMAP28067 261 aa13.52□□□□□ -0.25
PHGDH-227ENST00000641811 CRIP2P52943 208 aaPredicted RBP13.52□□□□□ -0.25
PHGDH-227ENST00000641811 BRWD1-AS2P59051 145 aa13.52□□□□□ -0.25
PHGDH-227ENST00000641811 GNB1P62873 340 aa13.52□□□□□ -0.25
PHGDH-227ENST00000641811 SSBP2P81877 361 aaPredicted RBP13.52□□□□□ -0.25
PHGDH-227ENST00000641811 OXLD1Q5BKU9 147 aa13.52□□□□□ -0.25
PHGDH-227ENST00000641811 RNASE12Q5GAN4 147 aaKnown RBP13.52□□□□□ -0.25
PHGDH-227ENST00000641811 OVCH2Q7RTZ1 564 aa13.52□□□□□ -0.25
PHGDH-227ENST00000641811 CASTOR1Q8WTX7 329 aa13.52□□□□□ -0.25
PHGDH-227ENST00000641811 TCTEX1D2Q8WW35 142 aa13.52□□□□□ -0.25
PHGDH-227ENST00000641811 DCUN1D5Q9BTE7 237 aa13.52□□□□□ -0.25
PHGDH-227ENST00000641811 MIXL1Q9H2W2 232 aa13.52□□□□□ -0.25
PHGDH-227ENST00000641811 PRELID3BQ9Y3B1 194 aa13.52□□□□□ -0.25
PHGDH-227ENST00000641811 A0A1W2PN81 502 aa13.51□□□□□ -0.25
PHGDH-227ENST00000641811 CTDSP2O14595 271 aa13.51□□□□□ -0.25
PHGDH-227ENST00000641811 CD33P20138 364 aa13.51□□□□□ -0.25
PHGDH-227ENST00000641811 CHRNA7P36544 502 aa13.51□□□□□ -0.25
PHGDH-227ENST00000641811 DYRK1AQ13627 763 aa13.51□□□□□ -0.25
PHGDH-227ENST00000641811 FXYD3Q14802 87 aa13.51□□□□□ -0.25
PHGDH-227ENST00000641811 MRGPRG-AS1Q2M3A8 158 aa13.51□□□□□ -0.25
PHGDH-227ENST00000641811 DEFB136Q30KP8 78 aa13.51□□□□□ -0.25
PHGDH-227ENST00000641811 SAMD5Q5TGI4 173 aa13.51□□□□□ -0.25
PHGDH-227ENST00000641811 IDO2Q6ZQW0 420 aa13.51□□□□□ -0.25
PHGDH-227ENST00000641811 TMEM17Q86X19 198 aa13.51□□□□□ -0.25
PHGDH-227ENST00000641811 MFSD4AQ8N468 514 aa13.51□□□□□ -0.25
PHGDH-227ENST00000641811 LFNGQ8NES3 379 aa13.51□□□□□ -0.25
PHGDH-227ENST00000641811 WFDC9Q8NEX5 89 aa13.51□□□□□ -0.25
PHGDH-227ENST00000641811 OR5H2Q8NGV7 314 aa13.51□□□□□ -0.25
PHGDH-227ENST00000641811 GRPEL2Q8TAA5 225 aa13.51□□□□□ -0.25
PHGDH-227ENST00000641811 DYNC2LI1Q8TCX1 351 aa13.51□□□□□ -0.25
PHGDH-227ENST00000641811 HSD17B10Q99714 261 aaKnown RBP13.51□□□□□ -0.25
PHGDH-227ENST00000641811 EXTL2Q9UBQ6 330 aa13.51□□□□□ -0.25
PHGDH-227ENST00000641811 NOTCH3Q9UM47 2321 aa13.51□□□□□ -0.25
PHGDH-227ENST00000641811 RGS5O15539 181 aa13.5□□□□□ -0.25
PHGDH-227ENST00000641811 IGLL1P15814 213 aa13.5□□□□□ -0.25
PHGDH-227ENST00000641811 HRH1P35367 487 aa13.5□□□□□ -0.25
PHGDH-227ENST00000641811 CDX1P47902 265 aaPredicted RBP13.5□□□□□ -0.25
PHGDH-227ENST00000641811 TAS2R46P59540 309 aa13.5□□□□□ -0.25
PHGDH-227ENST00000641811 KIAA0141Q14154 515 aaPredicted RBP13.5□□□□□ -0.25
PHGDH-227ENST00000641811 TMEM65Q6PI78 240 aa13.5□□□□□ -0.25
PHGDH-227ENST00000641811 UNQ5815/PRO19632Q6UWF5 114 aa13.5□□□□□ -0.25
PHGDH-227ENST00000641811 DHRS11Q6UWP2 260 aa13.5□□□□□ -0.25
PHGDH-227ENST00000641811 MRPL41Q8IXM3 137 aaKnown RBP13.5□□□□□ -0.25
PHGDH-227ENST00000641811 OSR1Q8TAX0 266 aaPredicted RBP13.5□□□□□ -0.25
PHGDH-227ENST00000641811 MYOZ3Q8TDC0 251 aa13.5□□□□□ -0.25
PHGDH-227ENST00000641811 ARPC1AQ92747 370 aa13.5□□□□□ -0.25
PHGDH-227ENST00000641811 RAX2Q96IS3 184 aa13.5□□□□□ -0.25
PHGDH-227ENST00000641811 ZNF2Q9BSG1 426 aaPredicted RBP13.5□□□□□ -0.25
PHGDH-227ENST00000641811 SCPEP1Q9HB40 452 aa13.5□□□□□ -0.25
PHGDH-227ENST00000641811 ADAM30Q9UKF2 790 aa13.5□□□□□ -0.25
PHGDH-227ENST00000641811 FOXA2Q9Y261 457 aaPredicted RBP13.5□□□□□ -0.25
PHGDH-227ENST00000641811 H3BMQ9 156 aa13.49□□□□□ -0.25
PHGDH-227ENST00000641811 CNIH1O95406 144 aa13.49□□□□□ -0.25
PHGDH-227ENST00000641811 RAB9AP51151 201 aa13.49□□□□□ -0.25
PHGDH-227ENST00000641811 UBE2KP61086 200 aa13.49□□□□□ -0.25
PHGDH-227ENST00000641811 HERV-K104P61576 105 aa13.49□□□□□ -0.25
PHGDH-227ENST00000641811 TMEM267Q0VDI3 215 aaPredicted RBP13.49□□□□□ -0.25
PHGDH-227ENST00000641811 VMA21Q3ZAQ7 101 aa13.49□□□□□ -0.25
PHGDH-227ENST00000641811 ZNF66Q6ZN08 573 aa13.49□□□□□ -0.25
PHGDH-227ENST00000641811 ZNF818PQ6ZRF7 136 aa13.49□□□□□ -0.25
PHGDH-227ENST00000641811 LAX1Q8IWV1 398 aa13.49□□□□□ -0.25
PHGDH-227ENST00000641811 VKORC1L1Q8N0U8 176 aa13.49□□□□□ -0.25
PHGDH-227ENST00000641811 LINC00482Q8N8I6 264 aa13.49□□□□□ -0.25
PHGDH-227ENST00000641811 TEX45Q8NA69 505 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 103 ms