RNA–Protein interactions for RNA: ENST00000641756.1

PHGDH-226, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,132 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-226ENST00000641756 SAA2-SAA4A0A096LPE2 208 aa14.73□□□□□ -0.05
PHGDH-226ENST00000641756 E7EQL1 145 aa14.73□□□□□ -0.05
PHGDH-226ENST00000641756 SAA2P0DJI9 122 aaPredicted RBP14.73□□□□□ -0.05
PHGDH-226ENST00000641756 RAB7AP51149 207 aa14.73□□□□□ -0.05
PHGDH-226ENST00000641756 ERVFRD-1P60508 538 aa14.73□□□□□ -0.05
PHGDH-226ENST00000641756 SSX8Q7RTT4 187 aa14.73□□□□□ -0.05
PHGDH-226ENST00000641756 CCL17Q92583 94 aa14.73□□□□□ -0.05
PHGDH-226ENST00000641756 WDR61Q9GZS3 305 aaKnown RBP14.73□□□□□ -0.05
PHGDH-226ENST00000641756 RAB9BQ9NP90 201 aa14.73□□□□□ -0.05
PHGDH-226ENST00000641756 IDI2-AS1Q9NZ38 188 aa14.73□□□□□ -0.05
PHGDH-226ENST00000641756 HCFC1P51610 2035 aa14.73□□□□□ -0.05
PHGDH-226ENST00000641756 YLPM1P49750 1951 aaKnown RBP14.73□□□□□ -0.05
PHGDH-226ENST00000641756 NKX6-3A6NJ46 265 aa14.72□□□□□ -0.05
PHGDH-226ENST00000641756 FAM90A27PA6NNH2 459 aa14.72□□□□□ -0.05
PHGDH-226ENST00000641756 PPIHO43447 177 aaKnown RBP14.72□□□□□ -0.05
PHGDH-226ENST00000641756 UCNP55089 124 aa14.72□□□□□ -0.05
PHGDH-226ENST00000641756 NCMAPQ5T1S8 102 aa14.72□□□□□ -0.05
PHGDH-226ENST00000641756 LYG1Q8N1E2 194 aa14.72□□□□□ -0.05
PHGDH-226ENST00000641756 FAM216AQ8WUB2 273 aa14.72□□□□□ -0.05
PHGDH-226ENST00000641756 EGLN1Q9GZT9 426 aa14.72□□□□□ -0.05
PHGDH-226ENST00000641756 NGBQ9NPG2 151 aa14.72□□□□□ -0.05
PHGDH-226ENST00000641756 PRELID3BQ9Y3B1 194 aa14.72□□□□□ -0.05
PHGDH-226ENST00000641756 ZNF729A6NN14 1252 aaPredicted RBP14.72□□□□□ -0.05
PHGDH-226ENST00000641756 OR13C7P0DN81 318 aa14.72□□□□□ -0.05
PHGDH-226ENST00000641756 TLE4Q04727 773 aa14.72□□□□□ -0.05
PHGDH-226ENST00000641756 HAGHQ16775 308 aa14.72□□□□□ -0.05
PHGDH-226ENST00000641756 DHRS7BQ6IAN0 325 aaPredicted RBP14.72□□□□□ -0.05
PHGDH-226ENST00000641756 ETV3LQ6ZN32 361 aa14.72□□□□□ -0.05
PHGDH-226ENST00000641756 SLC25A10Q9UBX3 287 aaPredicted RBP14.72□□□□□ -0.05
PHGDH-226ENST00000641756 PKDREJQ9NTG1 2253 aa14.71□□□□□ -0.05
PHGDH-226ENST00000641756 TRAV38-1A0A0B4J264 116 aa14.71□□□□□ -0.05
PHGDH-226ENST00000641756 RBFOX3A6NFN3 312 aa14.71□□□□□ -0.05
PHGDH-226ENST00000641756 VSTM5A8MXK1 200 aa14.71□□□□□ -0.05
PHGDH-226ENST00000641756 IFNA17P01571 189 aa14.71□□□□□ -0.05
PHGDH-226ENST00000641756 ZNF439Q8NDP4 499 aa14.71□□□□□ -0.05
PHGDH-226ENST00000641756 DDB2Q92466 427 aa14.71□□□□□ -0.05
PHGDH-226ENST00000641756 RNASE6Q93091 150 aaKnown RBP14.71□□□□□ -0.05
PHGDH-226ENST00000641756 DYNLRB1Q9NP97 96 aa14.71□□□□□ -0.05
PHGDH-226ENST00000641756 RPRMQ9NS64 109 aa14.71□□□□□ -0.05
PHGDH-226ENST00000641756 PPIAL4EA0A075B759 164 aa14.71□□□□□ -0.06
PHGDH-226ENST00000641756 TRAV3A0A0B4J244 114 aa14.71□□□□□ -0.06
PHGDH-226ENST00000641756 PMS2P5A8MQ11 134 aa14.71□□□□□ -0.06
PHGDH-226ENST00000641756 PPIAL4DF5H284 164 aa14.71□□□□□ -0.06
PHGDH-226ENST00000641756 TMEM178BH3BS89 294 aa14.71□□□□□ -0.06
PHGDH-226ENST00000641756 ITGB1BP1O14713 200 aa14.71□□□□□ -0.06
PHGDH-226ENST00000641756 PPIAL4FP0DN26 164 aa14.71□□□□□ -0.06
PHGDH-226ENST00000641756 CASP6P55212 293 aa14.71□□□□□ -0.06
PHGDH-226ENST00000641756 MRPS11P82912 194 aaKnown RBP14.71□□□□□ -0.06
PHGDH-226ENST00000641756 LINC01560Q8TB33 94 aa14.71□□□□□ -0.06
PHGDH-226ENST00000641756 TAF15Q92804 592 aaKnown RBP eCLIP14.71□□□□□ -0.06
PHGDH-226ENST00000641756 ZNF251Q9BRH9 671 aa14.71□□□□□ -0.06
PHGDH-226ENST00000641756 ZNRD1Q9P1U0 126 aa14.71□□□□□ -0.06
PHGDH-226ENST00000641756 PPIAL4AQ9Y536 164 aa14.71□□□□□ -0.06
PHGDH-226ENST00000641756 A0A1B0GW64 132 aa14.7□□□□□ -0.06
PHGDH-226ENST00000641756 RBFOX2O43251 390 aaKnown RBP eCLIP14.7□□□□□ -0.067e-8■■□□□ 12.4
PHGDH-226ENST00000641756 FCN3O75636 299 aa14.7□□□□□ -0.06
PHGDH-226ENST00000641756 PLA2G5P39877 138 aa14.7□□□□□ -0.06
PHGDH-226ENST00000641756 ELLP55199 621 aaPredicted RBP14.7□□□□□ -0.06
PHGDH-226ENST00000641756 ERVK-16P61578 105 aa14.7□□□□□ -0.06
PHGDH-226ENST00000641756 SP5Q6BEB4 398 aaPredicted RBP14.7□□□□□ -0.06
PHGDH-226ENST00000641756 DPPA3Q6W0C5 159 aa14.7□□□□□ -0.06
PHGDH-226ENST00000641756 OR4A16Q8NH70 328 aa14.7□□□□□ -0.06
PHGDH-226ENST00000641756 CORO2AQ92828 525 aa14.7□□□□□ -0.06
PHGDH-226ENST00000641756 CIB3Q96Q77 187 aaPredicted RBP14.7□□□□□ -0.06
PHGDH-226ENST00000641756 AIFM2Q9BRQ8 373 aa14.7□□□□□ -0.06
PHGDH-226ENST00000641756 PSMG3Q9BT73 122 aaPredicted RBP14.7□□□□□ -0.06
PHGDH-226ENST00000641756 SLC35B3Q9H1N7 401 aa14.7□□□□□ -0.06
PHGDH-226ENST00000641756 KIAA1456Q9P272 454 aa14.7□□□□□ -0.06
PHGDH-226ENST00000641756 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP14.69□□□□□ -0.06
PHGDH-226ENST00000641756 hADV38S2A0JD32 116 aa14.69□□□□□ -0.06
PHGDH-226ENST00000641756 BTBD17A6NE02 478 aa14.69□□□□□ -0.06
PHGDH-226ENST00000641756 OR8U8P0C7N1 319 aa14.69□□□□□ -0.06
PHGDH-226ENST00000641756 GRNP28799 593 aaKnown RBP14.69□□□□□ -0.06
PHGDH-226ENST00000641756 AKR1C3P42330 323 aa14.69□□□□□ -0.06
PHGDH-226ENST00000641756 SSX7Q7RTT5 188 aa14.69□□□□□ -0.06
PHGDH-226ENST00000641756 C1orf87Q8N0U7 546 aa14.69□□□□□ -0.06
PHGDH-226ENST00000641756 OR10P1Q8NGE3 313 aa14.69□□□□□ -0.06
PHGDH-226ENST00000641756 TMEM106BQ9NUM4 274 aa14.69□□□□□ -0.06
PHGDH-226ENST00000641756 TMEM140Q9NV12 185 aa14.69□□□□□ -0.06
PHGDH-226ENST00000641756 GAB2Q9UQC2 676 aa14.69□□□□□ -0.06
PHGDH-226ENST00000641756 KALRNO60229 2985 aa14.69□□□□□ -0.06
PHGDH-226ENST00000641756 EIF3GO75821 320 aaKnown RBP eCLIP14.69□□□□□ -0.06
PHGDH-226ENST00000641756 PLAUP00749 431 aa14.69□□□□□ -0.06
PHGDH-226ENST00000641756 NQO2P16083 231 aa14.69□□□□□ -0.06
PHGDH-226ENST00000641756 CA7P43166 264 aa14.69□□□□□ -0.06
PHGDH-226ENST00000641756 POLEQ07864 2286 aa14.69□□□□□ -0.06
PHGDH-226ENST00000641756 ZNF726P1Q15940 193 aa14.69□□□□□ -0.06
PHGDH-226ENST00000641756 LYPD2Q6UXB3 125 aa14.69□□□□□ -0.06
PHGDH-226ENST00000641756 ZNF383Q8NA42 475 aa14.69□□□□□ -0.06
PHGDH-226ENST00000641756 C20orf24Q9BUV8 137 aa14.69□□□□□ -0.06
PHGDH-226ENST00000641756 RPUSD1Q9UJJ7 312 aaKnown RBP14.69□□□□□ -0.06
PHGDH-226ENST00000641756 CCL21O00585 134 aa14.68□□□□□ -0.06
PHGDH-226ENST00000641756 CCL3L1P16619 93 aa14.68□□□□□ -0.06
PHGDH-226ENST00000641756 KIR2DS2P43631 304 aa14.68□□□□□ -0.06
PHGDH-226ENST00000641756 RPL31P62899 125 aaKnown RBP14.68□□□□□ -0.06
PHGDH-226ENST00000641756 KLRB1Q12918 225 aa14.68□□□□□ -0.06
PHGDH-226ENST00000641756 LCN15Q6UWW0 184 aa14.68□□□□□ -0.06
PHGDH-226ENST00000641756 OR4S2Q8NH73 311 aa14.68□□□□□ -0.06
PHGDH-226ENST00000641756 TMEM147Q9BVK8 224 aa14.68□□□□□ -0.06
PHGDH-226ENST00000641756 PARD6GQ9BYG4 376 aaPredicted RBP14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms