RNA–Protein interactions for RNA: ENST00000641573.1

PHGDH-221, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-221ENST00000641573 FCGR3BO75015 233 aa10.67□□□□□ -0.7
PHGDH-221ENST00000641573 SNAPC5O75971 98 aa10.67□□□□□ -0.7
PHGDH-221ENST00000641573 ATG12O94817 140 aa10.67□□□□□ -0.7
PHGDH-221ENST00000641573 S1PR2O95136 353 aa10.67□□□□□ -0.7
PHGDH-221ENST00000641573 SCGB1D2O95969 90 aa10.67□□□□□ -0.7
PHGDH-221ENST00000641573 CXCL2P19875 107 aa10.67□□□□□ -0.7
PHGDH-221ENST00000641573 EPHA1P21709 976 aa10.67□□□□□ -0.7
PHGDH-221ENST00000641573 KIR2DS2P43631 304 aa10.67□□□□□ -0.7
PHGDH-221ENST00000641573 AKR1C2P52895 323 aa10.67□□□□□ -0.7
PHGDH-221ENST00000641573 ARF6P62330 175 aa10.67□□□□□ -0.7
PHGDH-221ENST00000641573 PRSS54Q6PEW0 395 aa10.67□□□□□ -0.7
PHGDH-221ENST00000641573 ZNF833PQ6ZTB9 187 aa10.67□□□□□ -0.7
PHGDH-221ENST00000641573 ZNF546Q86UE3 836 aa10.67□□□□□ -0.7
PHGDH-221ENST00000641573 Q8N7P7 452 aa10.67□□□□□ -0.7
PHGDH-221ENST00000641573 OR4D5Q8NGN0 318 aa10.67□□□□□ -0.7
PHGDH-221ENST00000641573 DDB2Q92466 427 aa10.67□□□□□ -0.7
PHGDH-221ENST00000641573 RRNAD1Q96FB5 475 aaKnown RBP10.67□□□□□ -0.7
PHGDH-221ENST00000641573 GSX2Q9BZM3 304 aa10.67□□□□□ -0.7
PHGDH-221ENST00000641573 PRELID3BQ9Y3B1 194 aa10.67□□□□□ -0.7
PHGDH-221ENST00000641573 IGHV2-26A0A0B4J1V2 119 aa10.66□□□□□ -0.7
PHGDH-221ENST00000641573 A0A1B0GU03 582 aa10.66□□□□□ -0.7
PHGDH-221ENST00000641573 A8MXK9 166 aa10.66□□□□□ -0.7
PHGDH-221ENST00000641573 L7N2F9 121 aa10.66□□□□□ -0.7
PHGDH-221ENST00000641573 RBFOX2O43251 390 aaKnown RBP eCLIP10.66□□□□□ -0.7
PHGDH-221ENST00000641573 ENSAO43768 121 aaKnown RBP10.66□□□□□ -0.7
PHGDH-221ENST00000641573 MBPP02686 304 aaPredicted RBP10.66□□□□□ -0.7
PHGDH-221ENST00000641573 PET100P0DJ07 73 aa10.66□□□□□ -0.7
PHGDH-221ENST00000641573 CT45A6P0DMU7 189 aa10.66□□□□□ -0.7
PHGDH-221ENST00000641573 CT45A5P0DMU8 189 aa10.66□□□□□ -0.7
PHGDH-221ENST00000641573 CT45A7P0DMV0 189 aa10.66□□□□□ -0.7
PHGDH-221ENST00000641573 SLC25A6P12236 298 aa10.66□□□□□ -0.7
PHGDH-221ENST00000641573 LYL1P12980 280 aa10.66□□□□□ -0.7
PHGDH-221ENST00000641573 COX7A1P24310 79 aa10.66□□□□□ -0.7
PHGDH-221ENST00000641573 IL3RAP26951 378 aa10.66□□□□□ -0.7
PHGDH-221ENST00000641573 PRRX1P54821 245 aa10.66□□□□□ -0.7
PHGDH-221ENST00000641573 DLX1P56177 255 aa10.66□□□□□ -0.7
PHGDH-221ENST00000641573 DSCR9P59020 149 aa10.66□□□□□ -0.7
PHGDH-221ENST00000641573 LCN2P80188 198 aa10.66□□□□□ -0.7
PHGDH-221ENST00000641573 PRB3Q04118 309 aaPredicted RBP10.66□□□□□ -0.7
PHGDH-221ENST00000641573 SMCO1Q147U7 214 aa10.66□□□□□ -0.7
PHGDH-221ENST00000641573 FOXRED2Q8IWF2 684 aa10.66□□□□□ -0.7
PHGDH-221ENST00000641573 ZNF383Q8NA42 475 aa10.66□□□□□ -0.7
PHGDH-221ENST00000641573 OR1S1Q8NH92 325 aa10.66□□□□□ -0.7
PHGDH-221ENST00000641573 DCUN1D4Q92564 292 aa10.66□□□□□ -0.7
PHGDH-221ENST00000641573 TNFRSF14Q92956 283 aa10.66□□□□□ -0.7
PHGDH-221ENST00000641573 TMEM186Q96B77 213 aa10.66□□□□□ -0.7
PHGDH-221ENST00000641573 CLEC7AQ9BXN2 247 aa10.66□□□□□ -0.7
PHGDH-221ENST00000641573 MFFQ9GZY8 342 aa10.66□□□□□ -0.7
PHGDH-221ENST00000641573 ZFP57Q9NU63 452 aa10.66□□□□□ -0.7
PHGDH-221ENST00000641573 OR5AC2Q9NZP5 309 aa10.66□□□□□ -0.7
PHGDH-221ENST00000641573 TNFSF18Q9UNG2 199 aa10.66□□□□□ -0.7
PHGDH-221ENST00000641573 LSM5Q9Y4Y9 91 aaKnown RBP10.66□□□□□ -0.7
PHGDH-221ENST00000641573 MMP24Q9Y5R2 645 aa10.66□□□□□ -0.7
PHGDH-221ENST00000641573 IGHV4-30-2A0A087WSY4 118 aa10.65□□□□□ -0.7
PHGDH-221ENST00000641573 IGHV4-61A0A0C4DH41 118 aa10.65□□□□□ -0.7
PHGDH-221ENST00000641573 K7EPK0 472 aa10.65□□□□□ -0.7
PHGDH-221ENST00000641573 ST8SIA3O43173 380 aa10.65□□□□□ -0.7
PHGDH-221ENST00000641573 FOXH1O75593 365 aa10.65□□□□□ -0.7
PHGDH-221ENST00000641573 HPRT1P00492 218 aa10.65□□□□□ -0.7
PHGDH-221ENST00000641573 KRASP01116 189 aa10.65□□□□□ -0.7
PHGDH-221ENST00000641573 RLN2P04090 185 aa10.65□□□□□ -0.7
PHGDH-221ENST00000641573 G6PCP35575 357 aa10.65□□□□□ -0.7
PHGDH-221ENST00000641573 NKX2-1P43699 371 aaPredicted RBP10.65□□□□□ -0.7
PHGDH-221ENST00000641573 IZUMO4Q1ZYL8 232 aa10.65□□□□□ -0.7
PHGDH-221ENST00000641573 FAM71F2Q6NXP2 309 aa10.65□□□□□ -0.7
PHGDH-221ENST00000641573 Q6ZRM9 215 aa10.65□□□□□ -0.7
PHGDH-221ENST00000641573 FAM71E2Q8N5Q1 922 aa10.65□□□□□ -0.7
PHGDH-221ENST00000641573 KIR3DL3Q8N743 410 aa10.65□□□□□ -0.7
PHGDH-221ENST00000641573 OR13D1Q8NGV5 346 aa10.65□□□□□ -0.7
PHGDH-221ENST00000641573 OR4S2Q8NH73 311 aa10.65□□□□□ -0.7
PHGDH-221ENST00000641573 MRPL20Q9BYC9 149 aaKnown RBP10.65□□□□□ -0.7
PHGDH-221ENST00000641573 PLEKHA2Q9HB19 425 aa10.65□□□□□ -0.7
PHGDH-221ENST00000641573 CACNG5Q9UF02 275 aa10.65□□□□□ -0.7
PHGDH-221ENST00000641573 POMT1Q9Y6A1 747 aa10.65□□□□□ -0.7
PHGDH-221ENST00000641573 YLPM1P49750 1951 aaKnown RBP10.65□□□□□ -0.71
PHGDH-221ENST00000641573 IGHV2-70DA0A0C4DH43 119 aa10.64□□□□□ -0.71
PHGDH-221ENST00000641573 PITX3O75364 302 aa10.64□□□□□ -0.71
PHGDH-221ENST00000641573 DEDDO75618 318 aa10.64□□□□□ -0.71
PHGDH-221ENST00000641573 IGLV1-47P01700 117 aa10.64□□□□□ -0.71
PHGDH-221ENST00000641573 P0C879 139 aa10.64□□□□□ -0.71
PHGDH-221ENST00000641573 PRTN3P24158 256 aa10.64□□□□□ -0.71
PHGDH-221ENST00000641573 ZNF137PP52743 207 aa10.64□□□□□ -0.71
PHGDH-221ENST00000641573 PAX2Q02962 417 aa10.64□□□□□ -0.71
PHGDH-221ENST00000641573 HLA-DRB5Q30154 266 aa10.64□□□□□ -0.71
PHGDH-221ENST00000641573 CXorf66Q5JRM2 361 aaPredicted RBP10.64□□□□□ -0.71
PHGDH-221ENST00000641573 C1orf122Q6ZSJ8 110 aa10.64□□□□□ -0.71
PHGDH-221ENST00000641573 TMUB2Q71RG4 321 aa10.64□□□□□ -0.71
PHGDH-221ENST00000641573 PNKDQ8N490 385 aa10.64□□□□□ -0.71
PHGDH-221ENST00000641573 BEND2Q8NDZ0 799 aa10.64□□□□□ -0.71
PHGDH-221ENST00000641573 ST6GALNAC6Q969X2 333 aa10.64□□□□□ -0.71
PHGDH-221ENST00000641573 R3HDM4Q96D70 268 aa10.64□□□□□ -0.71
PHGDH-221ENST00000641573 SIRT7Q9NRC8 400 aa10.64□□□□□ -0.71
PHGDH-221ENST00000641573 SLC35D1Q9NTN3 355 aa10.64□□□□□ -0.71
PHGDH-221ENST00000641573 RCL1Q9Y2P8 373 aaKnown RBP10.64□□□□□ -0.71
PHGDH-221ENST00000641573 MALRD1Q5VYJ5 2156 aa10.64□□□□□ -0.71
PHGDH-221ENST00000641573 RNF222A6NCQ9 220 aa10.63□□□□□ -0.71
PHGDH-221ENST00000641573 FAM157AC9JC47 383 aa10.63□□□□□ -0.71
PHGDH-221ENST00000641573 KCNAB3O43448 404 aa10.63□□□□□ -0.71
PHGDH-221ENST00000641573 TSC22D2O75157 780 aa10.63□□□□□ -0.71
PHGDH-221ENST00000641573 OR2F2O95006 317 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms