RNA–Protein interactions for RNA: ENST00000641074.1

PHGDH-209, Transcript of phosphoglycerate dehydrogenase, humanhuman

BASIC

Gene PHGDH, Length 1,780 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-209ENST00000641074 PLA2G2AP14555 144 aa14.85□□□□□ -0.03
PHGDH-209ENST00000641074 COL8A1P27658 744 aa14.85□□□□□ -0.03
PHGDH-209ENST00000641074 REG1BP48304 166 aa14.85□□□□□ -0.03
PHGDH-209ENST00000641074 ZNF137PP52743 207 aa14.85□□□□□ -0.03
PHGDH-209ENST00000641074 LMO4P61968 165 aa14.85□□□□□ -0.03
PHGDH-209ENST00000641074 WRBO00258 174 aa14.84□□□□□ -0.03
PHGDH-209ENST00000641074 SPDEFO95238 335 aa14.84□□□□□ -0.03
PHGDH-209ENST00000641074 TMEM50AO95807 157 aa14.84□□□□□ -0.03
PHGDH-209ENST00000641074 IGLV1-47P01700 117 aa14.84□□□□□ -0.03
PHGDH-209ENST00000641074 NQO2P16083 231 aa14.84□□□□□ -0.03
PHGDH-209ENST00000641074 PVALBP20472 110 aaPredicted RBP14.84□□□□□ -0.03
PHGDH-209ENST00000641074 ATP5J2P56134 94 aa14.84□□□□□ -0.03
PHGDH-209ENST00000641074 FAM71F2Q6NXP2 309 aa14.84□□□□□ -0.03
PHGDH-209ENST00000641074 VKORC1L1Q8N0U8 176 aa14.84□□□□□ -0.03
PHGDH-209ENST00000641074 TNFRSF14Q92956 283 aa14.84□□□□□ -0.03
PHGDH-209ENST00000641074 ZNF471Q9BX82 626 aaPredicted RBP14.84□□□□□ -0.03
PHGDH-209ENST00000641074 CLEC7AQ9BXN2 247 aa14.84□□□□□ -0.03
PHGDH-209ENST00000641074 M0R1W7 72 aa14.83□□□□□ -0.03
PHGDH-209ENST00000641074 GPR137BO60478 399 aa14.83□□□□□ -0.03
PHGDH-209ENST00000641074 IFNA7P01567 189 aa14.83□□□□□ -0.03
PHGDH-209ENST00000641074 COX7A1P24310 79 aa14.83□□□□□ -0.03
PHGDH-209ENST00000641074 PRRX1P54821 245 aa14.83□□□□□ -0.03
PHGDH-209ENST00000641074 VAMP2P63027 116 aa14.83□□□□□ -0.03
PHGDH-209ENST00000641074 SSX9Q7RTT3 188 aa14.83□□□□□ -0.03
PHGDH-209ENST00000641074 CYTL1Q9NRR1 136 aa14.83□□□□□ -0.03
PHGDH-209ENST00000641074 CTNNBIP1Q9NSA3 81 aaPredicted RBP14.83□□□□□ -0.03
PHGDH-209ENST00000641074 SLC35D1Q9NTN3 355 aa14.83□□□□□ -0.03
PHGDH-209ENST00000641074 ASH1LQ9NR48 2969 aaKnown RBP14.83□□□□□ -0.04
PHGDH-209ENST00000641074 SPG11Q96JI7 2443 aa14.83□□□□□ -0.04
PHGDH-209ENST00000641074 OR9G9P0C7N8 305 aa14.83□□□□□ -0.04
PHGDH-209ENST00000641074 MMP9P14780 707 aa14.83□□□□□ -0.04
PHGDH-209ENST00000641074 PAX9P55771 341 aa14.83□□□□□ -0.04
PHGDH-209ENST00000641074 HLA-DRB5Q30154 266 aa14.83□□□□□ -0.04
PHGDH-209ENST00000641074 GPR157Q5UAW9 335 aa14.83□□□□□ -0.04
PHGDH-209ENST00000641074 CLEC9AQ6UXN8 241 aa14.83□□□□□ -0.04
PHGDH-209ENST00000641074 OR2C3Q8N628 320 aa14.83□□□□□ -0.04
PHGDH-209ENST00000641074 ST8SIA2Q92186 375 aa14.83□□□□□ -0.04
PHGDH-209ENST00000641074 FAM168AQ92567 244 aa14.83□□□□□ -0.04
PHGDH-209ENST00000641074 BARX1Q9HBU1 254 aaPredicted RBP14.83□□□□□ -0.04
PHGDH-209ENST00000641074 FAM24AA6NFZ4 105 aa14.82□□□□□ -0.04
PHGDH-209ENST00000641074 FAM90A26D6RGX4 464 aa14.82□□□□□ -0.04
PHGDH-209ENST00000641074 SYNGR2O43760 224 aa14.82□□□□□ -0.04
PHGDH-209ENST00000641074 IGKV1-16P04430 117 aa14.82□□□□□ -0.04
PHGDH-209ENST00000641074 IL3RAP26951 378 aa14.82□□□□□ -0.04
PHGDH-209ENST00000641074 CAV2P51636 162 aa14.82□□□□□ -0.04
PHGDH-209ENST00000641074 ERVK-16P61578 105 aa14.82□□□□□ -0.04
PHGDH-209ENST00000641074 UBA52P62987 128 aaKnown RBP14.82□□□□□ -0.04
PHGDH-209ENST00000641074 LCN2P80188 198 aa14.82□□□□□ -0.04
PHGDH-209ENST00000641074 RTL8BQ17RB0 113 aa14.82□□□□□ -0.04
PHGDH-209ENST00000641074 BEND2Q8NDZ0 799 aa14.82□□□□□ -0.04
PHGDH-209ENST00000641074 OR5AN1Q8NGI8 311 aa14.82□□□□□ -0.04
PHGDH-209ENST00000641074 C10orf105Q8TEF2 133 aa14.82□□□□□ -0.04
PHGDH-209ENST00000641074 BSCL2Q96G97 398 aaPredicted RBP14.82□□□□□ -0.04
PHGDH-209ENST00000641074 NABP2Q9BQ15 211 aa14.82□□□□□ -0.04
PHGDH-209ENST00000641074 PIMREGQ9BSJ6 248 aa14.82□□□□□ -0.04
PHGDH-209ENST00000641074 SIRT7Q9NRC8 400 aa14.82□□□□□ -0.04
PHGDH-209ENST00000641074 LYRM2Q9NU23 88 aaPredicted RBP14.82□□□□□ -0.04
PHGDH-209ENST00000641074 HSPB7Q9UBY9 170 aa14.82□□□□□ -0.04
PHGDH-209ENST00000641074 H0YJW9 148 aa14.81□□□□□ -0.04
PHGDH-209ENST00000641074 J3QKU1 62 aa14.81□□□□□ -0.04
PHGDH-209ENST00000641074 PAX2Q02962 417 aa14.81□□□□□ -0.04
PHGDH-209ENST00000641074 TNFRSF9Q07011 255 aa14.81□□□□□ -0.04
PHGDH-209ENST00000641074 PNKDQ8N490 385 aa14.81□□□□□ -0.04
PHGDH-209ENST00000641074 PERPQ96FX8 193 aa14.81□□□□□ -0.04
PHGDH-209ENST00000641074 RAB40CQ96S21 281 aa14.81□□□□□ -0.04
PHGDH-209ENST00000641074 TMEM140Q9NV12 185 aa14.81□□□□□ -0.04
PHGDH-209ENST00000641074 FBXL17Q9UF56 701 aa14.81□□□□□ -0.04
PHGDH-209ENST00000641074 UBQLN2Q9UHD9 624 aa14.81□□□□□ -0.04
PHGDH-209ENST00000641074 IGSF23A1L1A6 192 aa14.8□□□□□ -0.04
PHGDH-209ENST00000641074 FAM90A9PA6NNJ1 464 aa14.8□□□□□ -0.04
PHGDH-209ENST00000641074 A8MXK9 166 aa14.8□□□□□ -0.04
PHGDH-209ENST00000641074 BUB1B-PAK6H3BSN5 160 aa14.8□□□□□ -0.04
PHGDH-209ENST00000641074 ENSAO43768 121 aaKnown RBP14.8□□□□□ -0.04
PHGDH-209ENST00000641074 NHLH2Q02577 135 aa14.8□□□□□ -0.04
PHGDH-209ENST00000641074 DHRS7BQ6IAN0 325 aaPredicted RBP14.8□□□□□ -0.04
PHGDH-209ENST00000641074 CLEC2AQ6UVW9 174 aa14.8□□□□□ -0.04
PHGDH-209ENST00000641074 ALKAL2Q6UX46 152 aa14.8□□□□□ -0.04
PHGDH-209ENST00000641074 TGIF2LXQ8IUE1 241 aa14.8□□□□□ -0.04
PHGDH-209ENST00000641074 OR13D1Q8NGV5 346 aa14.8□□□□□ -0.04
PHGDH-209ENST00000641074 RHOVQ96L33 236 aa14.8□□□□□ -0.04
PHGDH-209ENST00000641074 USP9YO00507 2555 aaPredicted RBP14.8□□□□□ -0.04
PHGDH-209ENST00000641074 NDUFS8O00217 210 aa14.8□□□□□ -0.04
PHGDH-209ENST00000641074 TAAR5O14804 337 aa14.8□□□□□ -0.04
PHGDH-209ENST00000641074 RBMXL2O75526 392 aaKnown RBP14.8□□□□□ -0.04
PHGDH-209ENST00000641074 APOA2P02652 100 aa14.8□□□□□ -0.04
PHGDH-209ENST00000641074 IAPPP10997 89 aa14.8□□□□□ -0.04
PHGDH-209ENST00000641074 PRTN3P24158 256 aa14.8□□□□□ -0.04
PHGDH-209ENST00000641074 HTR2BP41595 481 aa14.8□□□□□ -0.04
PHGDH-209ENST00000641074 UBE2KP61086 200 aa14.8□□□□□ -0.04
PHGDH-209ENST00000641074 EWSR1Q01844 656 aaKnown RBP eCLIP14.8□□□□□ -0.04
PHGDH-209ENST00000641074 OR8H3Q8N146 312 aa14.8□□□□□ -0.04
PHGDH-209ENST00000641074 TMEM252Q8N6L7 170 aa14.8□□□□□ -0.04
PHGDH-209ENST00000641074 KIR3DL3Q8N743 410 aa14.8□□□□□ -0.04
PHGDH-209ENST00000641074 OR4P4Q8NGL7 312 aa14.8□□□□□ -0.04
PHGDH-209ENST00000641074 SMIM3Q9BZL3 60 aa14.8□□□□□ -0.04
PHGDH-209ENST00000641074 RBKSQ9H477 322 aa14.8□□□□□ -0.04
PHGDH-209ENST00000641074 MMP26Q9NRE1 261 aa14.8□□□□□ -0.04
PHGDH-209ENST00000641074 FBN2P35556 2912 aa14.79□□□□□ -0.04
PHGDH-209ENST00000641074 TRAV3A0A0B4J244 114 aa14.79□□□□□ -0.04
PHGDH-209ENST00000641074 VWC2LB2RUY7 222 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms