RNA–Protein interactions for RNA: ENST00000640568.1

TSPAN9-208, Transcript of tetraspanin 9, humanhuman

TSL 5

Gene TSPAN9, Length 1,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-208ENST00000640568 NCBP2LA6PVI3 153 aaKnown RBP17.26■□□□□ 0.35
TSPAN9-208ENST00000640568 MPPED1O15442 326 aa17.26■□□□□ 0.35
TSPAN9-208ENST00000640568 OR2F2O95006 317 aa17.26■□□□□ 0.35
TSPAN9-208ENST00000640568 NDUFB6O95139 128 aa17.26■□□□□ 0.35
TSPAN9-208ENST00000640568 CRYZL1O95825 349 aa17.26■□□□□ 0.35
TSPAN9-208ENST00000640568 RNASE1P07998 156 aaKnown RBP17.26■□□□□ 0.35
TSPAN9-208ENST00000640568 CCBE1Q6UXH8 406 aaPredicted RBP17.26■□□□□ 0.35
TSPAN9-208ENST00000640568 ENKURQ8TC29 256 aa17.26■□□□□ 0.35
TSPAN9-208ENST00000640568 CD300LFQ8TDQ1 290 aa17.26■□□□□ 0.35
TSPAN9-208ENST00000640568 RBMXL1Q96E39 390 aaKnown RBP17.26■□□□□ 0.35
TSPAN9-208ENST00000640568 RTBDNQ9BSG5 229 aaPredicted RBP17.26■□□□□ 0.35
TSPAN9-208ENST00000640568 C1RLQ9NZP8 487 aa17.26■□□□□ 0.35
TSPAN9-208ENST00000640568 MOB4Q9Y3A3 225 aa17.26■□□□□ 0.35
TSPAN9-208ENST00000640568 TEX13DA0A0J9YY54 714 aaPredicted RBP17.25■□□□□ 0.35
TSPAN9-208ENST00000640568 SHOXO15266 292 aa17.25■□□□□ 0.35
TSPAN9-208ENST00000640568 GPR137BO60478 399 aa17.25■□□□□ 0.35
TSPAN9-208ENST00000640568 PEX14O75381 377 aa17.25■□□□□ 0.35
TSPAN9-208ENST00000640568 IGKV1-16P04430 117 aa17.25■□□□□ 0.35
TSPAN9-208ENST00000640568 F2RP25116 425 aa17.25■□□□□ 0.35
TSPAN9-208ENST00000640568 MMDQ15546 238 aa17.25■□□□□ 0.35
TSPAN9-208ENST00000640568 TCTEX1D1Q8N7M0 179 aa17.25■□□□□ 0.35
TSPAN9-208ENST00000640568 HARBI1Q96MB7 349 aa17.25■□□□□ 0.35
TSPAN9-208ENST00000640568 KIAA1456Q9P272 454 aa17.25■□□□□ 0.35
TSPAN9-208ENST00000640568 CRYBA1P05813 215 aa17.24■□□□□ 0.35
TSPAN9-208ENST00000640568 AKR1C4P17516 323 aa17.24■□□□□ 0.35
TSPAN9-208ENST00000640568 FBLN7Q53RD9 439 aa17.24■□□□□ 0.35
TSPAN9-208ENST00000640568 C11orf88Q6PI97 169 aa17.24■□□□□ 0.35
TSPAN9-208ENST00000640568 SGPP2Q8IWX5 399 aa17.24■□□□□ 0.35
TSPAN9-208ENST00000640568 CENPSQ8N2Z9 138 aa17.24■□□□□ 0.35
TSPAN9-208ENST00000640568 OR8H1Q8NGG4 311 aa17.24■□□□□ 0.35
TSPAN9-208ENST00000640568 TSNAXQ99598 290 aaKnown RBP17.24■□□□□ 0.35
TSPAN9-208ENST00000640568 RNF5Q99942 180 aa17.24■□□□□ 0.35
TSPAN9-208ENST00000640568 PALMDQ9NP74 551 aa17.24■□□□□ 0.35
TSPAN9-208ENST00000640568 SLC6A1P30531 599 aa17.24■□□□□ 0.35
TSPAN9-208ENST00000640568 TMEM177Q53S58 311 aa17.24■□□□□ 0.35
TSPAN9-208ENST00000640568 Q8N6K4 173 aa17.24■□□□□ 0.35
TSPAN9-208ENST00000640568 ADAD2Q8NCV1 583 aaKnown RBP17.24■□□□□ 0.35
TSPAN9-208ENST00000640568 OSR1Q8TAX0 266 aaPredicted RBP17.24■□□□□ 0.35
TSPAN9-208ENST00000640568 C3orf85A0A1B0GTC6 90 aa17.23■□□□□ 0.35
TSPAN9-208ENST00000640568 M0QZK8 103 aa17.23■□□□□ 0.35
TSPAN9-208ENST00000640568 NBR2O15453 112 aa17.23■□□□□ 0.35
TSPAN9-208ENST00000640568 RBFOX2O43251 390 aaKnown RBP eCLIP17.23■□□□□ 0.35
TSPAN9-208ENST00000640568 CHST1O43916 411 aa17.23■□□□□ 0.35
TSPAN9-208ENST00000640568 TAS2R31P59538 309 aa17.23■□□□□ 0.35
TSPAN9-208ENST00000640568 C20orf85Q9H1P6 137 aa17.23■□□□□ 0.35
TSPAN9-208ENST00000640568 NAA60Q9H7X0 242 aa17.23■□□□□ 0.35
TSPAN9-208ENST00000640568 NIPBLQ6KC79 2804 aaeCLIP17.22■□□□□ 0.35
TSPAN9-208ENST00000640568 FAM181BA6NEQ2 426 aa17.22■□□□□ 0.35
TSPAN9-208ENST00000640568 CRYM-AS1A6NIL9 109 aa17.22■□□□□ 0.35
TSPAN9-208ENST00000640568 H0Y980 276 aa17.22■□□□□ 0.35
TSPAN9-208ENST00000640568 ARPC1BO15143 372 aaKnown RBP17.22■□□□□ 0.35
TSPAN9-208ENST00000640568 RAMP3O60896 148 aa17.22■□□□□ 0.35
TSPAN9-208ENST00000640568 HPRT1P00492 218 aa17.22■□□□□ 0.35
TSPAN9-208ENST00000640568 TCRBP04435 133 aa17.22■□□□□ 0.35
TSPAN9-208ENST00000640568 LGALS7P47929 136 aa17.22■□□□□ 0.35
TSPAN9-208ENST00000640568 F2RL1P55085 397 aa17.22■□□□□ 0.35
TSPAN9-208ENST00000640568 SRSF2Q01130 221 aaKnown RBP17.22■□□□□ 0.35
TSPAN9-208ENST00000640568 DCTN2Q13561 401 aaKnown RBP17.22■□□□□ 0.35
TSPAN9-208ENST00000640568 PLGLAQ15195 96 aa17.22■□□□□ 0.35
TSPAN9-208ENST00000640568 RITA1Q96K30 269 aa17.22■□□□□ 0.35
TSPAN9-208ENST00000640568 KCNIP3Q9Y2W7 256 aa17.22■□□□□ 0.35
TSPAN9-208ENST00000640568 FGF16O43320 207 aa17.21■□□□□ 0.35
TSPAN9-208ENST00000640568 B3GALNT1O75752 331 aa17.21■□□□□ 0.35
TSPAN9-208ENST00000640568 SERPINE2P07093 398 aa17.21■□□□□ 0.35
TSPAN9-208ENST00000640568 ANXA3P12429 323 aa17.21■□□□□ 0.35
TSPAN9-208ENST00000640568 CNTFRP26992 372 aa17.21■□□□□ 0.35
TSPAN9-208ENST00000640568 RPL15P61313 204 aaKnown RBP17.21■□□□□ 0.35
TSPAN9-208ENST00000640568 TMEM230Q96A57 120 aa17.21■□□□□ 0.35
TSPAN9-208ENST00000640568 RASL11BQ9BPW5 248 aa17.21■□□□□ 0.35
TSPAN9-208ENST00000640568 AIFM2Q9BRQ8 373 aa17.21■□□□□ 0.35
TSPAN9-208ENST00000640568 NPFFR1Q9GZQ6 430 aa17.21■□□□□ 0.35
TSPAN9-208ENST00000640568 FAM212BQ9NTI7 297 aaPredicted RBP17.21■□□□□ 0.35
TSPAN9-208ENST00000640568 FLVCR2Q9UPI3 526 aa17.21■□□□□ 0.35
TSPAN9-208ENST00000640568 SPDEFO95238 335 aa17.2■□□□□ 0.34
TSPAN9-208ENST00000640568 HRASP01112 189 aa17.2■□□□□ 0.34
TSPAN9-208ENST00000640568 LPAR6P43657 344 aa17.2■□□□□ 0.34
TSPAN9-208ENST00000640568 BRWD1-AS2P59051 145 aa17.2■□□□□ 0.34
TSPAN9-208ENST00000640568 TRIM16LQ309B1 348 aa17.2■□□□□ 0.34
TSPAN9-208ENST00000640568 VMA21Q3ZAQ7 101 aa17.2■□□□□ 0.34
TSPAN9-208ENST00000640568 TMEM128Q5BJH2 165 aa17.2■□□□□ 0.34
TSPAN9-208ENST00000640568 TP53RKQ96S44 253 aa17.2■□□□□ 0.34
TSPAN9-208ENST00000640568 PLEKHA2Q9HB19 425 aa17.2■□□□□ 0.34
TSPAN9-208ENST00000640568 NUBP2Q9Y5Y2 271 aa17.2■□□□□ 0.34
TSPAN9-208ENST00000640568 TRAV6A0A075B6T7 132 aa17.19■□□□□ 0.34
TSPAN9-208ENST00000640568 S1PR2O95136 353 aa17.19■□□□□ 0.34
TSPAN9-208ENST00000640568 OR5AC1P0C628 307 aa17.19■□□□□ 0.34
TSPAN9-208ENST00000640568 ERVK-16P61578 105 aa17.19■□□□□ 0.34
TSPAN9-208ENST00000640568 NRARPQ7Z6K4 114 aa17.19■□□□□ 0.34
TSPAN9-208ENST00000640568 C5orf56Q8N8D9 126 aa17.19■□□□□ 0.34
TSPAN9-208ENST00000640568 NPBQ8NG41 125 aa17.19■□□□□ 0.34
TSPAN9-208ENST00000640568 ZFAND2BQ8WV99 257 aa17.19■□□□□ 0.34
TSPAN9-208ENST00000640568 NUDT15Q9NV35 164 aa17.19■□□□□ 0.34
TSPAN9-208ENST00000640568 COMMD9Q9P000 198 aa17.19■□□□□ 0.34
TSPAN9-208ENST00000640568 METTL1Q9UBP6 276 aaKnown RBP17.19■□□□□ 0.34
TSPAN9-208ENST00000640568 RRHO14718 337 aa17.18■□□□□ 0.34
TSPAN9-208ENST00000640568 SLC25A17O43808 307 aa17.18■□□□□ 0.34
TSPAN9-208ENST00000640568 NDUFA3O95167 84 aa17.18■□□□□ 0.34
TSPAN9-208ENST00000640568 RPA2P15927 270 aa17.18■□□□□ 0.34
TSPAN9-208ENST00000640568 NQO2P16083 231 aa17.18■□□□□ 0.34
TSPAN9-208ENST00000640568 VAMP1P23763 118 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms