RNA–Protein interactions for RNA: ENST00000640499.1

VEGFA-231, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFA, Length 1,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-231ENST00000640499 MTFP1Q9UDX5 166 aa20.94■□□□□ 0.94
VEGFA-231ENST00000640499 RSL24D1Q9UHA3 163 aaKnown RBP20.94■□□□□ 0.94
VEGFA-231ENST00000640499 CCDC160A6NGH7 325 aa20.93■□□□□ 0.94
VEGFA-231ENST00000640499 G3V318 75 aa20.93■□□□□ 0.94
VEGFA-231ENST00000640499 RRASP10301 218 aa20.93■□□□□ 0.94
VEGFA-231ENST00000640499 GNRHRP30968 328 aa20.93■□□□□ 0.94
VEGFA-231ENST00000640499 LGALS7P47929 136 aa20.93■□□□□ 0.94
VEGFA-231ENST00000640499 DGCR2P98153 550 aa20.93■□□□□ 0.94
VEGFA-231ENST00000640499 PJVKQ0ZLH3 352 aa20.93■□□□□ 0.94
VEGFA-231ENST00000640499 RTL8BQ17RB0 113 aa20.93■□□□□ 0.94
VEGFA-231ENST00000640499 C19orf54Q5BKX5 351 aa20.93■□□□□ 0.94
VEGFA-231ENST00000640499 OR4X2Q8NGF9 303 aa20.93■□□□□ 0.94
VEGFA-231ENST00000640499 FAM110DQ8TAY7 271 aaPredicted RBP20.93■□□□□ 0.94
VEGFA-231ENST00000640499 HARBI1Q96MB7 349 aa20.93■□□□□ 0.94
VEGFA-231ENST00000640499 HSD17B10Q99714 261 aaKnown RBP20.93■□□□□ 0.94
VEGFA-231ENST00000640499 SOSTQ9BQB4 213 aa20.93■□□□□ 0.94
VEGFA-231ENST00000640499 C6orf62Q9GZU0 229 aaPredicted RBP20.93■□□□□ 0.94
VEGFA-231ENST00000640499 TAS2R8Q9NYW2 309 aa20.93■□□□□ 0.94
VEGFA-231ENST00000640499 WSB1Q9Y6I7 421 aa20.93■□□□□ 0.94
VEGFA-231ENST00000640499 A0A1W2PRX2 142 aa20.92■□□□□ 0.94
VEGFA-231ENST00000640499 TNFSF12O43508 249 aa20.92■□□□□ 0.94
VEGFA-231ENST00000640499 FCGR3BO75015 233 aa20.92■□□□□ 0.94
VEGFA-231ENST00000640499 CRYZL1O95825 349 aa20.92■□□□□ 0.94
VEGFA-231ENST00000640499 PPIFP30405 207 aaKnown RBP20.92■□□□□ 0.94
VEGFA-231ENST00000640499 OR2B11Q5JQS5 317 aa20.92■□□□□ 0.94
VEGFA-231ENST00000640499 ZNF818PQ6ZRF7 136 aa20.92■□□□□ 0.94
VEGFA-231ENST00000640499 KCTD9Q7L273 389 aa20.92■□□□□ 0.94
VEGFA-231ENST00000640499 MCFD2Q8NI22 146 aa20.92■□□□□ 0.94
VEGFA-231ENST00000640499 MMP27Q9H306 513 aa20.92■□□□□ 0.94
VEGFA-231ENST00000640499 PARP11Q9NR21 331 aa20.92■□□□□ 0.94
VEGFA-231ENST00000640499 ZNF701M0R085 212 aaPredicted RBP20.91■□□□□ 0.94
VEGFA-231ENST00000640499 ARPC1BO15143 372 aaKnown RBP20.91■□□□□ 0.94
VEGFA-231ENST00000640499 SHOXO15266 292 aa20.91■□□□□ 0.94
VEGFA-231ENST00000640499 TNFSF8P32971 234 aa20.91■□□□□ 0.94
VEGFA-231ENST00000640499 ZNF562Q6V9R5 426 aa20.91■□□□□ 0.94
VEGFA-231ENST00000640499 LCNL1Q6ZST4 164 aa20.91■□□□□ 0.94
VEGFA-231ENST00000640499 C18orf65Q6ZTR6 163 aa20.91■□□□□ 0.94
VEGFA-231ENST00000640499 DIRAS2Q96HU8 199 aa20.91■□□□□ 0.94
VEGFA-231ENST00000640499 DCUN1D5Q9BTE7 237 aa20.91■□□□□ 0.94
VEGFA-231ENST00000640499 FXYD6Q9H0Q3 95 aa20.91■□□□□ 0.94
VEGFA-231ENST00000640499 TSSC4Q9Y5U2 329 aaPredicted RBP20.91■□□□□ 0.94
VEGFA-231ENST00000640499 CA2P00918 260 aa20.9■□□□□ 0.94
VEGFA-231ENST00000640499 CRIP2P52943 208 aaPredicted RBP20.9■□□□□ 0.94
VEGFA-231ENST00000640499 SLC35B1P78383 322 aa20.9■□□□□ 0.94
VEGFA-231ENST00000640499 PLGLAQ15195 96 aa20.9■□□□□ 0.94
VEGFA-231ENST00000640499 ZNF66Q6ZN08 573 aa20.9■□□□□ 0.94
VEGFA-231ENST00000640499 TMEM17Q86X19 198 aa20.9■□□□□ 0.94
VEGFA-231ENST00000640499 ZBTB34Q8NCN2 500 aa20.9■□□□□ 0.94
VEGFA-231ENST00000640499 NUBP2Q9Y5Y2 271 aa20.9■□□□□ 0.94
VEGFA-231ENST00000640499 M0QYG6 137 aa20.89■□□□□ 0.93
VEGFA-231ENST00000640499 IGHG4P01861 327 aa20.89■□□□□ 0.93
VEGFA-231ENST00000640499 VAX1Q5SQQ9 334 aa20.89■□□□□ 0.93
VEGFA-231ENST00000640499 TEX38Q6PEX7 206 aa20.89■□□□□ 0.93
VEGFA-231ENST00000640499 PPP1R27Q86WC6 154 aa20.89■□□□□ 0.93
VEGFA-231ENST00000640499 RNF152Q8N8N0 203 aa20.89■□□□□ 0.93
VEGFA-231ENST00000640499 OR6F1Q8NGZ6 308 aa20.89■□□□□ 0.93
VEGFA-231ENST00000640499 OSR1Q8TAX0 266 aaPredicted RBP20.89■□□□□ 0.93
VEGFA-231ENST00000640499 TCTEX1D2Q8WW35 142 aa20.89■□□□□ 0.93
VEGFA-231ENST00000640499 FCAMRQ8WWV6 532 aa20.89■□□□□ 0.93
VEGFA-231ENST00000640499 TINAGL1Q9GZM7 467 aaPredicted RBP20.89■□□□□ 0.93
VEGFA-231ENST00000640499 TNCP24821 2201 aa20.88■□□□□ 0.93
VEGFA-231ENST00000640499 GABARAPH6UMI1 98 aa20.88■□□□□ 0.93
VEGFA-231ENST00000640499 OPN1MWP04001 364 aa20.88■□□□□ 0.93
VEGFA-231ENST00000640499 CD3DP04234 171 aa20.88■□□□□ 0.93
VEGFA-231ENST00000640499 RPLP1P05386 114 aaKnown RBP20.88■□□□□ 0.93
VEGFA-231ENST00000640499 OPN1MW2P0DN77 364 aa20.88■□□□□ 0.93
VEGFA-231ENST00000640499 OPN1MW3P0DN78 364 aa20.88■□□□□ 0.93
VEGFA-231ENST00000640499 HERV-K104P61576 105 aa20.88■□□□□ 0.93
VEGFA-231ENST00000640499 PYHIN1Q6K0P9 492 aa20.88■□□□□ 0.93
VEGFA-231ENST00000640499 COMMD1Q8N668 190 aa20.88■□□□□ 0.93
VEGFA-231ENST00000640499 MINDY2Q8NBR6 621 aa20.88■□□□□ 0.93
VEGFA-231ENST00000640499 C15orf40Q8WUR7 153 aa20.88■□□□□ 0.93
VEGFA-231ENST00000640499 FAM103A1Q9BTL3 118 aaKnown RBP20.88■□□□□ 0.93
VEGFA-231ENST00000640499 PRELID3BQ9Y3B1 194 aa20.88■□□□□ 0.93
VEGFA-231ENST00000640499 TRAV41A0A0B4J266 112 aa20.87■□□□□ 0.93
VEGFA-231ENST00000640499 CTDSPLO15194 276 aa20.87■□□□□ 0.93
VEGFA-231ENST00000640499 SOX15O60248 233 aa20.87■□□□□ 0.93
VEGFA-231ENST00000640499 RAMP3O60896 148 aa20.87■□□□□ 0.93
VEGFA-231ENST00000640499 IGLV1-40P01703 118 aa20.87■□□□□ 0.93
VEGFA-231ENST00000640499 VDAC1P21796 283 aa20.87■□□□□ 0.93
VEGFA-231ENST00000640499 PSMB8P28062 276 aa20.87■□□□□ 0.93
VEGFA-231ENST00000640499 UBE2KP61086 200 aa20.87■□□□□ 0.93
VEGFA-231ENST00000640499 RPL23AP62750 156 aaKnown RBP20.87■□□□□ 0.93
VEGFA-231ENST00000640499 FOXE3Q13461 319 aa20.87■□□□□ 0.93
VEGFA-231ENST00000640499 KIAA0141Q14154 515 aaPredicted RBP20.87■□□□□ 0.93
VEGFA-231ENST00000640499 AADACL3Q5VUY0 350 aa20.87■□□□□ 0.93
VEGFA-231ENST00000640499 FOXB2Q5VYV0 432 aa20.87■□□□□ 0.93
VEGFA-231ENST00000640499 IDO2Q6ZQW0 420 aa20.87■□□□□ 0.93
VEGFA-231ENST00000640499 OR4D10Q8NGI6 311 aa20.87■□□□□ 0.93
VEGFA-231ENST00000640499 R3HDM4Q96D70 268 aa20.87■□□□□ 0.93
VEGFA-231ENST00000640499 GON7Q9BXV9 100 aa20.87■□□□□ 0.93
VEGFA-231ENST00000640499 KLK15Q9H2R5 256 aa20.87■□□□□ 0.93
VEGFA-231ENST00000640499 CBX3Q13185 183 aa20.86■□□□□ 0.93
VEGFA-231ENST00000640499 VKORC1L1Q8N0U8 176 aa20.86■□□□□ 0.93
VEGFA-231ENST00000640499 TEX45Q8NA69 505 aa20.86■□□□□ 0.93
VEGFA-231ENST00000640499 SMIM4Q8WVI0 70 aa20.86■□□□□ 0.93
VEGFA-231ENST00000640499 PGLYRP1O75594 196 aaPredicted RBP20.85■□□□□ 0.93
VEGFA-231ENST00000640499 CD74P04233 296 aa20.85■□□□□ 0.93
VEGFA-231ENST00000640499 SAA1P0DJI8 122 aaPredicted RBP20.85■□□□□ 0.93
VEGFA-231ENST00000640499 IL18Q14116 193 aa20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms