RNA–Protein interactions for RNA: ENST00000640289.1

GTF3A-209, Transcript of general transcription factor IIIA, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,098 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-209ENST00000640289 FOXL1Q12952 345 aa10.48□□□□□ -0.73
GTF3A-209ENST00000640289 RTL8BQ17RB0 113 aa10.48□□□□□ -0.73
GTF3A-209ENST00000640289 AWAT1Q58HT5 328 aa10.48□□□□□ -0.73
GTF3A-209ENST00000640289 IDO2Q6ZQW0 420 aa10.48□□□□□ -0.73
GTF3A-209ENST00000640289 SLC38A6Q8IZM9 456 aa10.48□□□□□ -0.73
GTF3A-209ENST00000640289 NPBQ8NG41 125 aa10.48□□□□□ -0.73
GTF3A-209ENST00000640289 OR8H1Q8NGG4 311 aa10.48□□□□□ -0.73
GTF3A-209ENST00000640289 OR13C8Q8NGS7 320 aa10.48□□□□□ -0.73
GTF3A-209ENST00000640289 OR4F5Q8NH21 305 aa10.48□□□□□ -0.73
GTF3A-209ENST00000640289 OR51H1Q8NH63 302 aa10.48□□□□□ -0.73
GTF3A-209ENST00000640289 MARCH1Q8TCQ1 289 aa10.48□□□□□ -0.73
GTF3A-209ENST00000640289 HARBI1Q96MB7 349 aa10.48□□□□□ -0.73
GTF3A-209ENST00000640289 RASL11BQ9BPW5 248 aa10.48□□□□□ -0.73
GTF3A-209ENST00000640289 FBXL15Q9H469 300 aa10.48□□□□□ -0.73
GTF3A-209ENST00000640289 PRELID3BQ9Y3B1 194 aa10.48□□□□□ -0.73
GTF3A-209ENST00000640289 FBN1P35555 2871 aaKnown RBP10.48□□□□□ -0.73
GTF3A-209ENST00000640289 LINC00854A0A1B0GVQ3 168 aa10.47□□□□□ -0.73
GTF3A-209ENST00000640289 SRRM4A7MD48 611 aaKnown RBP10.47□□□□□ -0.73
GTF3A-209ENST00000640289 SHOXO15266 292 aa10.47□□□□□ -0.73
GTF3A-209ENST00000640289 RAMP3O60896 148 aa10.47□□□□□ -0.73
GTF3A-209ENST00000640289 NDUFA3O95167 84 aa10.47□□□□□ -0.73
GTF3A-209ENST00000640289 IGLV2-23P01705 113 aa10.47□□□□□ -0.73
GTF3A-209ENST00000640289 RRASP10301 218 aa10.47□□□□□ -0.73
GTF3A-209ENST00000640289 INPP1P49441 399 aa10.47□□□□□ -0.73
GTF3A-209ENST00000640289 CATR1Q13166 79 aa10.47□□□□□ -0.73
GTF3A-209ENST00000640289 CBX3Q13185 183 aa10.47□□□□□ -0.73
GTF3A-209ENST00000640289 PSG5Q15238 335 aa10.47□□□□□ -0.73
GTF3A-209ENST00000640289 TMEM177Q53S58 311 aa10.47□□□□□ -0.73
GTF3A-209ENST00000640289 ARSJQ5FYB0 599 aaPredicted RBP10.47□□□□□ -0.73
GTF3A-209ENST00000640289 LPCAT3Q6P1A2 487 aa10.47□□□□□ -0.73
GTF3A-209ENST00000640289 CMTM1Q8IZ96 169 aa10.47□□□□□ -0.73
GTF3A-209ENST00000640289 Q8N2B8 174 aa10.47□□□□□ -0.73
GTF3A-209ENST00000640289 S100ZQ8WXG8 99 aa10.47□□□□□ -0.73
GTF3A-209ENST00000640289 BORCS5Q969J3 196 aa10.47□□□□□ -0.73
GTF3A-209ENST00000640289 RNF5Q99942 180 aa10.47□□□□□ -0.73
GTF3A-209ENST00000640289 PRRT1Q99946 306 aa10.47□□□□□ -0.73
GTF3A-209ENST00000640289 BEX1Q9HBH7 125 aa10.47□□□□□ -0.73
GTF3A-209ENST00000640289 LIN7CQ9NUP9 197 aaKnown RBP10.47□□□□□ -0.73
GTF3A-209ENST00000640289 KIAA1456Q9P272 454 aa10.47□□□□□ -0.73
GTF3A-209ENST00000640289 CLPSL1A2RUU4 121 aa10.46□□□□□ -0.73
GTF3A-209ENST00000640289 LINC01548A6NM66 108 aa10.46□□□□□ -0.73
GTF3A-209ENST00000640289 RRHO14718 337 aa10.46□□□□□ -0.73
GTF3A-209ENST00000640289 FAUP35544 74 aaKnown RBP10.46□□□□□ -0.73
GTF3A-209ENST00000640289 COMPP49747 757 aaPredicted RBP10.46□□□□□ -0.73
GTF3A-209ENST00000640289 C5orf64Q2M2E5 130 aa10.46□□□□□ -0.73
GTF3A-209ENST00000640289 TBC1D26Q86UD7 250 aa10.46□□□□□ -0.73
GTF3A-209ENST00000640289 SPAG16Q8N0X2 631 aa10.46□□□□□ -0.73
GTF3A-209ENST00000640289 OR4S2Q8NH73 311 aa10.46□□□□□ -0.73
GTF3A-209ENST00000640289 OR2T6Q8NHC8 308 aa10.46□□□□□ -0.73
GTF3A-209ENST00000640289 CLCC1Q96S66 551 aa10.46□□□□□ -0.73
GTF3A-209ENST00000640289 HSPB9Q9BQS6 159 aa10.46□□□□□ -0.73
GTF3A-209ENST00000640289 SLC2A9Q9NRM0 540 aa10.46□□□□□ -0.73
GTF3A-209ENST00000640289 TPSG1Q9NRR2 321 aa10.46□□□□□ -0.73
GTF3A-209ENST00000640289 SERTAD4Q9NUC0 356 aa10.46□□□□□ -0.73
GTF3A-209ENST00000640289 SLC2A8Q9NY64 477 aa10.46□□□□□ -0.73
GTF3A-209ENST00000640289 SCP2D1Q9UJQ7 156 aa10.46□□□□□ -0.73
GTF3A-209ENST00000640289 RNF114Q9Y508 228 aa10.46□□□□□ -0.73
GTF3A-209ENST00000640289 MMP24Q9Y5R2 645 aa10.46□□□□□ -0.73
GTF3A-209ENST00000640289 HAX1O00165 279 aa10.45□□□□□ -0.74
GTF3A-209ENST00000640289 SLC25A17O43808 307 aa10.45□□□□□ -0.74
GTF3A-209ENST00000640289 VSIG10L2P0DP72 767 aa10.45□□□□□ -0.74
GTF3A-209ENST00000640289 KIR2DS2P43631 304 aa10.45□□□□□ -0.74
GTF3A-209ENST00000640289 VDAC2P45880 294 aaPredicted RBP10.45□□□□□ -0.74
GTF3A-209ENST00000640289 LGALS7P47929 136 aa10.45□□□□□ -0.74
GTF3A-209ENST00000640289 PIGPP57054 158 aa10.45□□□□□ -0.74
GTF3A-209ENST00000640289 PLGLAQ15195 96 aa10.45□□□□□ -0.74
GTF3A-209ENST00000640289 VKORC1L1Q8N0U8 176 aa10.45□□□□□ -0.74
GTF3A-209ENST00000640289 ZFAND1Q8TCF1 268 aa10.45□□□□□ -0.74
GTF3A-209ENST00000640289 ZNF486Q96H40 463 aaPredicted RBP10.45□□□□□ -0.74
GTF3A-209ENST00000640289 TSNAXQ99598 290 aaKnown RBP10.45□□□□□ -0.74
GTF3A-209ENST00000640289 WDR12Q9GZL7 423 aaKnown RBP10.45□□□□□ -0.74
GTF3A-209ENST00000640289 METTL1Q9UBP6 276 aaKnown RBP10.45□□□□□ -0.74
GTF3A-209ENST00000640289 GPR132Q9UNW8 380 aa10.45□□□□□ -0.74
GTF3A-209ENST00000640289 A0A1B0GUS0 222 aa10.44□□□□□ -0.74
GTF3A-209ENST00000640289 FCN1O00602 326 aa10.44□□□□□ -0.74
GTF3A-209ENST00000640289 SPDEFO95238 335 aa10.44□□□□□ -0.74
GTF3A-209ENST00000640289 IGHG2P01859 326 aa10.44□□□□□ -0.74
GTF3A-209ENST00000640289 CRYGBP07316 175 aa10.44□□□□□ -0.74
GTF3A-209ENST00000640289 CTSDP07339 412 aaPredicted RBP10.44□□□□□ -0.74
GTF3A-209ENST00000640289 F2RP25116 425 aa10.44□□□□□ -0.74
GTF3A-209ENST00000640289 CD40LGP29965 261 aa10.44□□□□□ -0.74
GTF3A-209ENST00000640289 PROK1P58294 105 aa10.44□□□□□ -0.74
GTF3A-209ENST00000640289 RND3P61587 244 aa10.44□□□□□ -0.74
GTF3A-209ENST00000640289 ZNF846Q147U1 533 aa10.44□□□□□ -0.74
GTF3A-209ENST00000640289 SURF2Q15527 256 aaPredicted RBP10.44□□□□□ -0.74
GTF3A-209ENST00000640289 LIN54Q6MZP7 749 aa10.44□□□□□ -0.74
GTF3A-209ENST00000640289 C12orf54Q6X4T0 127 aa10.44□□□□□ -0.74
GTF3A-209ENST00000640289 SLC35E3Q7Z769 313 aa10.44□□□□□ -0.74
GTF3A-209ENST00000640289 OSR1Q8TAX0 266 aaPredicted RBP10.44□□□□□ -0.74
GTF3A-209ENST00000640289 DEDD2Q8WXF8 326 aa10.44□□□□□ -0.74
GTF3A-209ENST00000640289 RTBDNQ9BSG5 229 aaPredicted RBP10.44□□□□□ -0.74
GTF3A-209ENST00000640289 CCDC32Q9BV29 185 aa10.44□□□□□ -0.74
GTF3A-209ENST00000640289 C5orf66Q9H5L9 145 aa10.44□□□□□ -0.74
GTF3A-209ENST00000640289 LINC00527Q9UJ94 153 aa10.44□□□□□ -0.74
GTF3A-209ENST00000640289 VSIG4Q9Y279 399 aa10.44□□□□□ -0.74
GTF3A-209ENST00000640289 IGHV7-81A0A0B4J1V7 117 aa10.43□□□□□ -0.74
GTF3A-209ENST00000640289 MPPED1O15442 326 aa10.43□□□□□ -0.74
GTF3A-209ENST00000640289 PLA2G10O15496 165 aa10.43□□□□□ -0.74
GTF3A-209ENST00000640289 RBFOX2O43251 390 aaKnown RBP eCLIP10.43□□□□□ -0.747e-8■■■□□ 15.2
GTF3A-209ENST00000640289 S1PR2O95136 353 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms