RNA–Protein interactions for RNA: ENST00000638889.1

CCDC7-211, Transcript of coiled-coil domain containing 7, humanhuman

TSL 3

Gene CCDC7, Length 423 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-211ENST00000638889 PACRGLQ8N7B6 248 aa0.14□□□□□ -2.39
CCDC7-211ENST00000638889 C9orf163Q8N9P6 203 aa0.14□□□□□ -2.39
CCDC7-211ENST00000638889 RORBQ92753 470 aa0.14□□□□□ -2.39
CCDC7-211ENST00000638889 TMA16Q96EY4 203 aaKnown RBP0.14□□□□□ -2.39
CCDC7-211ENST00000638889 IMMP2LQ96T52 175 aa0.14□□□□□ -2.39
CCDC7-211ENST00000638889 NMNAT3Q96T66 252 aa0.14□□□□□ -2.39
CCDC7-211ENST00000638889 REG4Q9BYZ8 158 aa0.14□□□□□ -2.39
CCDC7-211ENST00000638889 FLT4P35916 1363 aa0.14□□□□□ -2.39
CCDC7-211ENST00000638889 SCAF11Q99590 1463 aaKnown RBP0.14□□□□□ -2.39
CCDC7-211ENST00000638889 THSD7AQ9UPZ6 1657 aa0.14□□□□□ -2.39
CCDC7-211ENST00000638889 CPAMD8Q8IZJ3 1885 aa0.14□□□□□ -2.39
CCDC7-211ENST00000638889 NAV1Q8NEY1 1877 aa0.14□□□□□ -2.39
CCDC7-211ENST00000638889 ARFGEF3Q5TH69 2177 aa0.13□□□□□ -2.39
CCDC7-211ENST00000638889 TRAV7A0A075B6U4 112 aa0.13□□□□□ -2.39
CCDC7-211ENST00000638889 F5H5K5 113 aa0.13□□□□□ -2.39
CCDC7-211ENST00000638889 H7C2G1 150 aa0.13□□□□□ -2.39
CCDC7-211ENST00000638889 COPEO14579 308 aa0.13□□□□□ -2.39
CCDC7-211ENST00000638889 LGALS1P09382 135 aaKnown RBP0.13□□□□□ -2.39
CCDC7-211ENST00000638889 TBPL1P62380 186 aa0.13□□□□□ -2.39
CCDC7-211ENST00000638889 C10orf55Q5SWW7 151 aa0.13□□□□□ -2.39
CCDC7-211ENST00000638889 LCN8Q6JVE9 175 aa0.13□□□□□ -2.39
CCDC7-211ENST00000638889 ZNF439Q8NDP4 499 aa0.13□□□□□ -2.39
CCDC7-211ENST00000638889 OR13C8Q8NGS7 320 aa0.13□□□□□ -2.39
CCDC7-211ENST00000638889 LRRC20Q8TCA0 184 aa0.13□□□□□ -2.39
CCDC7-211ENST00000638889 PPWD1Q96BP3 646 aaKnown RBP0.13□□□□□ -2.39
CCDC7-211ENST00000638889 GLI3P10071 1580 aa0.13□□□□□ -2.39
CCDC7-211ENST00000638889 HEATR5BQ9P2D3 2071 aa0.12□□□□□ -2.39
CCDC7-211ENST00000638889 ABCC12Q96J65 1359 aa0.12□□□□□ -2.39
CCDC7-211ENST00000638889 IGKV2D-29A0A075B6S2 120 aaPredicted RBP0.12□□□□□ -2.39
CCDC7-211ENST00000638889 TRAV38-1A0A0B4J264 116 aa0.12□□□□□ -2.39
CCDC7-211ENST00000638889 A0A0J9YW62 118 aa0.12□□□□□ -2.39
CCDC7-211ENST00000638889 M0R381 172 aa0.12□□□□□ -2.39
CCDC7-211ENST00000638889 SULT1C2O00338 296 aa0.12□□□□□ -2.39
CCDC7-211ENST00000638889 LIN7AO14910 233 aaPredicted RBP0.12□□□□□ -2.39
CCDC7-211ENST00000638889 SYNGR1O43759 233 aa0.12□□□□□ -2.39
CCDC7-211ENST00000638889 RPL28P46779 137 aaKnown RBP0.12□□□□□ -2.39
CCDC7-211ENST00000638889 REG1BP48304 166 aa0.12□□□□□ -2.39
CCDC7-211ENST00000638889 ETV1P50549 477 aa0.12□□□□□ -2.39
CCDC7-211ENST00000638889 TMEM86AQ8N2M4 240 aa0.12□□□□□ -2.39
CCDC7-211ENST00000638889 CCDC12Q8WUD4 166 aaPredicted RBP0.12□□□□□ -2.39
CCDC7-211ENST00000638889 TLCD1Q96CP7 247 aa0.12□□□□□ -2.39
CCDC7-211ENST00000638889 MS4A6EQ96DS6 147 aa0.12□□□□□ -2.39
CCDC7-211ENST00000638889 EMC3Q9P0I2 261 aa0.12□□□□□ -2.39
CCDC7-211ENST00000638889 SNURFQ9Y675 71 aa0.12□□□□□ -2.39
CCDC7-211ENST00000638889 CHD2O14647 1828 aaKnown RBP0.12□□□□□ -2.39
CCDC7-211ENST00000638889 MUC12Q9UKN1 5478 aa0.12□□□□□ -2.39
CCDC7-211ENST00000638889 SETD5Q9C0A6 1442 aa0.12□□□□□ -2.39
CCDC7-211ENST00000638889 FSIP2Q5CZC0 6907 aa0.12□□□□□ -2.39
CCDC7-211ENST00000638889 ABCA4P78363 2273 aa0.11□□□□□ -2.39
CCDC7-211ENST00000638889 MEIS3P1A6NDR6 274 aa0.11□□□□□ -2.39
CCDC7-211ENST00000638889 OR6C6A6NF89 314 aa0.11□□□□□ -2.39
CCDC7-211ENST00000638889 H0YC42 278 aa0.11□□□□□ -2.39
CCDC7-211ENST00000638889 TNFAIP8O95379 198 aa0.11□□□□□ -2.39
CCDC7-211ENST00000638889 RNASE3P12724 160 aaKnown RBP0.11□□□□□ -2.39
CCDC7-211ENST00000638889 CCL2P13500 99 aa0.11□□□□□ -2.39
CCDC7-211ENST00000638889 ALDH3A1P30838 453 aa0.11□□□□□ -2.39
CCDC7-211ENST00000638889 DLX6P56179 175 aa0.11□□□□□ -2.39
CCDC7-211ENST00000638889 FXYD7P58549 80 aa0.11□□□□□ -2.39
CCDC7-211ENST00000638889 TAS2R20P59543 309 aa0.11□□□□□ -2.39
CCDC7-211ENST00000638889 SNAP25P60880 206 aa0.11□□□□□ -2.39
CCDC7-211ENST00000638889 RAB8AP61006 207 aa0.11□□□□□ -2.39
CCDC7-211ENST00000638889 OR4D1Q15615 310 aa0.11□□□□□ -2.39
CCDC7-211ENST00000638889 UMODL1-AS1Q8N2C9 162 aa0.11□□□□□ -2.39
CCDC7-211ENST00000638889 Q8WTZ3 238 aa0.11□□□□□ -2.39
CCDC7-211ENST00000638889 SERPINB11Q96P15 392 aa0.11□□□□□ -2.39
CCDC7-211ENST00000638889 GMEB1Q9Y692 573 aa0.11□□□□□ -2.39
CCDC7-211ENST00000638889 SYNE2Q8WXH0 6885 aaKnown RBP0.11□□□□□ -2.39
CCDC7-211ENST00000638889 DMBT1Q9UGM3 2413 aaPredicted RBP0.11□□□□□ -2.39
CCDC7-211ENST00000638889 CHD5Q8TDI0 1954 aa0.1□□□□□ -2.39
CCDC7-211ENST00000638889 DOPEY1Q5JWR5 2465 aa0.1□□□□□ -2.39
CCDC7-211ENST00000638889 NAV2Q8IVL1 2488 aa0.1□□□□□ -2.39
CCDC7-211ENST00000638889 TRAV8-1A0A0A6YYK1 113 aa0.1□□□□□ -2.39
CCDC7-211ENST00000638889 OR51F1A6NGY5 319 aa0.1□□□□□ -2.39
CCDC7-211ENST00000638889 H3BT86 120 aa0.1□□□□□ -2.39
CCDC7-211ENST00000638889 MPZL2O60487 215 aa0.1□□□□□ -2.39
CCDC7-211ENST00000638889 CREBL2O60519 120 aaPredicted RBP0.1□□□□□ -2.39
CCDC7-211ENST00000638889 PPBPP02775 128 aa0.1□□□□□ -2.39
CCDC7-211ENST00000638889 TRGC1P0CF51 173 aa0.1□□□□□ -2.39
CCDC7-211ENST00000638889 SLC35E2BP0CK96 405 aa0.1□□□□□ -2.39
CCDC7-211ENST00000638889 CFL1P23528 166 aaKnown RBP0.1□□□□□ -2.39
CCDC7-211ENST00000638889 TMEM33P57088 247 aa0.1□□□□□ -2.39
CCDC7-211ENST00000638889 CARD18P57730 90 aa0.1□□□□□ -2.39
CCDC7-211ENST00000638889 RAB14P61106 215 aa0.1□□□□□ -2.39
CCDC7-211ENST00000638889 AP1S1P61966 158 aa0.1□□□□□ -2.39
CCDC7-211ENST00000638889 HIST1H4AP62805 103 aaKnown RBP0.1□□□□□ -2.39
CCDC7-211ENST00000638889 STX3Q13277 289 aa0.1□□□□□ -2.39
CCDC7-211ENST00000638889 ACSM3Q53FZ2 586 aa0.1□□□□□ -2.39
CCDC7-211ENST00000638889 ZNF565Q8N9K5 539 aa0.1□□□□□ -2.39
CCDC7-211ENST00000638889 SMIM12Q96EX1 92 aa0.1□□□□□ -2.39
CCDC7-211ENST00000638889 MRPL57Q9BQC6 102 aaKnown RBP0.1□□□□□ -2.39
CCDC7-211ENST00000638889 TMEM208Q9BTX3 173 aa0.1□□□□□ -2.39
CCDC7-211ENST00000638889 CHST6Q9GZX3 395 aa0.1□□□□□ -2.39
CCDC7-211ENST00000638889 POFUT2Q9Y2G5 429 aa0.1□□□□□ -2.39
CCDC7-211ENST00000638889 SBDSQ9Y3A5 250 aaKnown RBP eCLIP0.1□□□□□ -2.39
CCDC7-211ENST00000638889 NCOA6Q14686 2063 aaPredicted RBP0.1□□□□□ -2.39
CCDC7-211ENST00000638889 MAST4O15021 2626 aa0.1□□□□□ -2.39
CCDC7-211ENST00000638889 IBA57-AS1B1ANH7 110 aa0.09□□□□□ -2.4
CCDC7-211ENST00000638889 FADS2O95864 444 aaKnown RBP0.09□□□□□ -2.4
CCDC7-211ENST00000638889 H2BFSP57053 126 aa0.09□□□□□ -2.4
CCDC7-211ENST00000638889 FKBP1AP62942 108 aaKnown RBP0.09□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms