RNA–Protein interactions for RNA: ENST00000637823.1

CLN6-223, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 717 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-223ENST00000637823 GZMKP49863 264 aa9.55□□□□□ -0.88
CLN6-223ENST00000637823 UBE2E1P51965 193 aa9.55□□□□□ -0.88
CLN6-223ENST00000637823 PRB3Q04118 309 aaPredicted RBP9.55□□□□□ -0.88
CLN6-223ENST00000637823 RTL8BQ17RB0 113 aa9.55□□□□□ -0.88
CLN6-223ENST00000637823 Q5BKY6 102 aa9.55□□□□□ -0.88
CLN6-223ENST00000637823 THOC7Q6I9Y2 204 aaKnown RBP9.55□□□□□ -0.88
CLN6-223ENST00000637823 LINC01356Q8N9X3 169 aa9.55□□□□□ -0.88
CLN6-223ENST00000637823 OR5AN1Q8NGI8 311 aa9.55□□□□□ -0.88
CLN6-223ENST00000637823 RNASE11Q8TAA1 199 aaKnown RBP9.55□□□□□ -0.88
CLN6-223ENST00000637823 PPP1R1CQ8WVI7 109 aa9.55□□□□□ -0.88
CLN6-223ENST00000637823 GPR146Q96CH1 333 aa9.55□□□□□ -0.88
CLN6-223ENST00000637823 TBX15Q96SF7 602 aa9.55□□□□□ -0.88
CLN6-223ENST00000637823 NABP2Q9BQ15 211 aa9.55□□□□□ -0.88
CLN6-223ENST00000637823 AIFM2Q9BRQ8 373 aa9.55□□□□□ -0.88
CLN6-223ENST00000637823 MRPL20Q9BYC9 149 aaKnown RBP9.55□□□□□ -0.88
CLN6-223ENST00000637823 SLC35D1Q9NTN3 355 aa9.55□□□□□ -0.88
CLN6-223ENST00000637823 DPM3Q9P2X0 92 aa9.55□□□□□ -0.88
CLN6-223ENST00000637823 MMP24Q9Y5R2 645 aa9.55□□□□□ -0.88
CLN6-223ENST00000637823 PDZD2O15018 2839 aa9.54□□□□□ -0.88
CLN6-223ENST00000637823 RNF223E7ERA6 249 aa9.54□□□□□ -0.88
CLN6-223ENST00000637823 G3V3Q6 166 aa9.54□□□□□ -0.88
CLN6-223ENST00000637823 SNAPC5O75971 98 aa9.54□□□□□ -0.88
CLN6-223ENST00000637823 HRASP01112 189 aa9.54□□□□□ -0.88
CLN6-223ENST00000637823 KRASP01116 189 aa9.54□□□□□ -0.88
CLN6-223ENST00000637823 NQO2P16083 231 aa9.54□□□□□ -0.88
CLN6-223ENST00000637823 AKR1C2P52895 323 aa9.54□□□□□ -0.88
CLN6-223ENST00000637823 LGALS4P56470 323 aa9.54□□□□□ -0.88
CLN6-223ENST00000637823 KLRD1Q13241 179 aa9.54□□□□□ -0.88
CLN6-223ENST00000637823 DIAPH2-AS1Q14236 149 aa9.54□□□□□ -0.88
CLN6-223ENST00000637823 MINOS1Q5TGZ0 78 aa9.54□□□□□ -0.88
CLN6-223ENST00000637823 KRTAP1-3Q8IUG1 177 aa9.54□□□□□ -0.88
CLN6-223ENST00000637823 RPEQ96AT9 228 aa9.54□□□□□ -0.88
CLN6-223ENST00000637823 R3HDM4Q96D70 268 aa9.54□□□□□ -0.88
CLN6-223ENST00000637823 Q96MF0 132 aa9.54□□□□□ -0.88
CLN6-223ENST00000637823 ZFP57Q9NU63 452 aa9.54□□□□□ -0.88
CLN6-223ENST00000637823 MINOS1-NBL1R4GNA1 71 aa9.54□□□□□ -0.88
CLN6-223ENST00000637823 ITPR2Q14571 2701 aa9.53□□□□□ -0.88
CLN6-223ENST00000637823 IGHV1-3A0A0C4DH29 117 aa9.53□□□□□ -0.88
CLN6-223ENST00000637823 A0A0G2JRQ6 117 aa9.53□□□□□ -0.88
CLN6-223ENST00000637823 FAM90A9PA6NNJ1 464 aa9.53□□□□□ -0.88
CLN6-223ENST00000637823 OOSP1A8MZH6 123 aa9.53□□□□□ -0.88
CLN6-223ENST00000637823 H0YJW9 148 aa9.53□□□□□ -0.88
CLN6-223ENST00000637823 MPC2O95563 127 aa9.53□□□□□ -0.88
CLN6-223ENST00000637823 CRYZL1O95825 349 aa9.53□□□□□ -0.88
CLN6-223ENST00000637823 P0C879 139 aa9.53□□□□□ -0.88
CLN6-223ENST00000637823 SLC25A4P12235 298 aa9.53□□□□□ -0.88
CLN6-223ENST00000637823 G6PCP35575 357 aa9.53□□□□□ -0.88
CLN6-223ENST00000637823 REG1BP48304 166 aa9.53□□□□□ -0.88
CLN6-223ENST00000637823 ARHGDIBP52566 201 aa9.53□□□□□ -0.88
CLN6-223ENST00000637823 ERVK-16P61578 105 aa9.53□□□□□ -0.88
CLN6-223ENST00000637823 SMCO1Q147U7 214 aa9.53□□□□□ -0.88
CLN6-223ENST00000637823 TPTE2P1Q5T6R2 138 aa9.53□□□□□ -0.88
CLN6-223ENST00000637823 H2BFWTQ7Z2G1 175 aa9.53□□□□□ -0.88
CLN6-223ENST00000637823 PDPNQ86YL7 162 aa9.53□□□□□ -0.88
CLN6-223ENST00000637823 OR8H3Q8N146 312 aa9.53□□□□□ -0.88
CLN6-223ENST00000637823 OR11H4Q8NGC9 324 aa9.53□□□□□ -0.88
CLN6-223ENST00000637823 OR4D5Q8NGN0 318 aa9.53□□□□□ -0.88
CLN6-223ENST00000637823 THAP6Q8TBB0 222 aa9.53□□□□□ -0.88
CLN6-223ENST00000637823 LHX4Q969G2 390 aa9.53□□□□□ -0.88
CLN6-223ENST00000637823 FOXC2Q99958 501 aa9.53□□□□□ -0.88
CLN6-223ENST00000637823 COA4Q9NYJ1 87 aa9.53□□□□□ -0.88
CLN6-223ENST00000637823 WASHC3Q9Y3C0 194 aa9.53□□□□□ -0.88
CLN6-223ENST00000637823 TBL2Q9Y4P3 447 aaKnown RBP9.53□□□□□ -0.88
CLN6-223ENST00000637823 AUP1Q9Y679 476 aa9.53□□□□□ -0.88
CLN6-223ENST00000637823 PRRC2AP48634 2157 aaKnown RBP9.53□□□□□ -0.88
CLN6-223ENST00000637823 TRAV14DV4A0A0A6YYC5 116 aa9.52□□□□□ -0.89
CLN6-223ENST00000637823 MARCH11A6NNE9 402 aa9.52□□□□□ -0.89
CLN6-223ENST00000637823 HMSDA8MTL9 139 aa9.52□□□□□ -0.89
CLN6-223ENST00000637823 H7C2Y5 167 aa9.52□□□□□ -0.89
CLN6-223ENST00000637823 PITX3O75364 302 aa9.52□□□□□ -0.89
CLN6-223ENST00000637823 RLN2P04090 185 aa9.52□□□□□ -0.89
CLN6-223ENST00000637823 PET100P0DJ07 73 aa9.52□□□□□ -0.89
CLN6-223ENST00000637823 RAB13P51153 203 aa9.52□□□□□ -0.89
CLN6-223ENST00000637823 RAB32Q13637 225 aa9.52□□□□□ -0.89
CLN6-223ENST00000637823 POU2AF1Q16633 256 aa9.52□□□□□ -0.89
CLN6-223ENST00000637823 MIDNQ504T8 468 aa9.52□□□□□ -0.89
CLN6-223ENST00000637823 TMEM177Q53S58 311 aa9.52□□□□□ -0.89
CLN6-223ENST00000637823 C11orf87Q6NUJ2 197 aa9.52□□□□□ -0.89
CLN6-223ENST00000637823 TMEM65Q6PI78 240 aa9.52□□□□□ -0.89
CLN6-223ENST00000637823 Q6ZRM9 215 aa9.52□□□□□ -0.89
CLN6-223ENST00000637823 MOB3BQ86TA1 216 aa9.52□□□□□ -0.89
CLN6-223ENST00000637823 DMBX1Q8NFW5 382 aa9.52□□□□□ -0.89
CLN6-223ENST00000637823 OR1S1Q8NH92 325 aa9.52□□□□□ -0.89
CLN6-223ENST00000637823 OSR1Q8TAX0 266 aaPredicted RBP9.52□□□□□ -0.89
CLN6-223ENST00000637823 FLYWCH2Q96CP2 140 aaKnown RBP9.52□□□□□ -0.89
CLN6-223ENST00000637823 RNF126Q9BV68 326 aa9.52□□□□□ -0.89
CLN6-223ENST00000637823 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.52□□□□□ -0.89
CLN6-223ENST00000637823 HIF1ANQ9NWT6 349 aa9.52□□□□□ -0.89
CLN6-223ENST00000637823 TET2Q6N021 2002 aaPredicted RBP9.51□□□□□ -0.89
CLN6-223ENST00000637823 CENPVL3A0A0U1RRI6 287 aa9.51□□□□□ -0.89
CLN6-223ENST00000637823 A0A1W2PRD5 423 aa9.51□□□□□ -0.89
CLN6-223ENST00000637823 A0A1W2PRF3 423 aa9.51□□□□□ -0.89
CLN6-223ENST00000637823 A0A1W2PRM7 423 aa9.51□□□□□ -0.89
CLN6-223ENST00000637823 J3QLI3 93 aa9.51□□□□□ -0.89
CLN6-223ENST00000637823 ST8SIA3O43173 380 aa9.51□□□□□ -0.89
CLN6-223ENST00000637823 MBPP02686 304 aaPredicted RBP9.51□□□□□ -0.89
CLN6-223ENST00000637823 LYL1P12980 280 aa9.51□□□□□ -0.89
CLN6-223ENST00000637823 NKX2-1P43699 371 aaPredicted RBP9.51□□□□□ -0.89
CLN6-223ENST00000637823 NKX2-5P52952 324 aaPredicted RBP9.51□□□□□ -0.89
CLN6-223ENST00000637823 ID3Q02535 119 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms