RNA–Protein interactions for RNA: ENST00000637538.1

CLCN2-220, Transcript of chloride voltage-gated channel 2, humanhuman

TSL 5

Gene CLCN2, Length 1,545 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN2-220ENST00000637538 PRELID3BQ9Y3B1 194 aa13.58□□□□□ -0.24
CLCN2-220ENST00000637538 HOXB4P17483 251 aaPredicted RBP13.57□□□□□ -0.24
CLCN2-220ENST00000637538 IL3RAP26951 378 aa13.57□□□□□ -0.24
CLCN2-220ENST00000637538 PAX8Q06710 450 aa13.57□□□□□ -0.24
CLCN2-220ENST00000637538 Q5PR19 223 aa13.57□□□□□ -0.24
CLCN2-220ENST00000637538 PPP1R1CQ8WVI7 109 aa13.57□□□□□ -0.24
CLCN2-220ENST00000637538 TBX15Q96SF7 602 aa13.57□□□□□ -0.24
CLCN2-220ENST00000637538 FOXC2Q99958 501 aa13.57□□□□□ -0.24
CLCN2-220ENST00000637538 PLEKHA2Q9HB19 425 aa13.57□□□□□ -0.24
CLCN2-220ENST00000637538 RNASEK-C17orf49H0YIS7 233 aa13.56□□□□□ -0.24
CLCN2-220ENST00000637538 FCGR3BO75015 233 aa13.56□□□□□ -0.24
CLCN2-220ENST00000637538 SLC25A6P12236 298 aa13.56□□□□□ -0.24
CLCN2-220ENST00000637538 LOXL1Q08397 574 aaPredicted RBP13.56□□□□□ -0.24
CLCN2-220ENST00000637538 ZNF816Q0VGE8 651 aaPredicted RBP13.56□□□□□ -0.24
CLCN2-220ENST00000637538 KLRD1Q13241 179 aa13.56□□□□□ -0.24
CLCN2-220ENST00000637538 LDLRAD2Q5SZI1 272 aa13.56□□□□□ -0.24
CLCN2-220ENST00000637538 OR5AN1Q8NGI8 311 aa13.56□□□□□ -0.24
CLCN2-220ENST00000637538 OR4D5Q8NGN0 318 aa13.56□□□□□ -0.24
CLCN2-220ENST00000637538 GPR146Q96CH1 333 aa13.56□□□□□ -0.24
CLCN2-220ENST00000637538 NABP2Q9BQ15 211 aa13.56□□□□□ -0.24
CLCN2-220ENST00000637538 LPAR2Q9HBW0 351 aa13.56□□□□□ -0.24
CLCN2-220ENST00000637538 H0YJW9 148 aa13.55□□□□□ -0.24
CLCN2-220ENST00000637538 L7N2F9 121 aa13.55□□□□□ -0.24
CLCN2-220ENST00000637538 PITX3O75364 302 aa13.55□□□□□ -0.24
CLCN2-220ENST00000637538 TOX4O94842 621 aa13.55□□□□□ -0.24
CLCN2-220ENST00000637538 HPRT1P00492 218 aa13.55□□□□□ -0.24
CLCN2-220ENST00000637538 TMEM65Q6PI78 240 aa13.55□□□□□ -0.24
CLCN2-220ENST00000637538 OR4S2Q8NH73 311 aa13.55□□□□□ -0.24
CLCN2-220ENST00000637538 PCGF1Q9BSM1 259 aa13.55□□□□□ -0.24
CLCN2-220ENST00000637538 COMMD9Q9P000 198 aa13.55□□□□□ -0.24
CLCN2-220ENST00000637538 AMMECR1Q9Y4X0 333 aaPredicted RBP13.55□□□□□ -0.24
CLCN2-220ENST00000637538 MMP24Q9Y5R2 645 aa13.55□□□□□ -0.24
CLCN2-220ENST00000637538 WNK2Q9Y3S1 2297 aa13.55□□□□□ -0.24
CLCN2-220ENST00000637538 C2CD3Q4AC94 2353 aa13.55□□□□□ -0.24
CLCN2-220ENST00000637538 A0A1B0GU03 582 aa13.54□□□□□ -0.24
CLCN2-220ENST00000637538 MPC2O95563 127 aa13.54□□□□□ -0.24
CLCN2-220ENST00000637538 MSMBP08118 114 aa13.54□□□□□ -0.24
CLCN2-220ENST00000637538 SLC25A4P12235 298 aa13.54□□□□□ -0.24
CLCN2-220ENST00000637538 PSMB6P28072 239 aa13.54□□□□□ -0.24
CLCN2-220ENST00000637538 REG1BP48304 166 aa13.54□□□□□ -0.24
CLCN2-220ENST00000637538 TAGLNQ01995 201 aaKnown RBP13.54□□□□□ -0.24
CLCN2-220ENST00000637538 SPNS3Q6ZMD2 512 aa13.54□□□□□ -0.24
CLCN2-220ENST00000637538 Q6ZRM9 215 aa13.54□□□□□ -0.24
CLCN2-220ENST00000637538 FAM219AQ8IW50 185 aa13.54□□□□□ -0.24
CLCN2-220ENST00000637538 SPIN2AQ99865 258 aa13.54□□□□□ -0.24
CLCN2-220ENST00000637538 SPIN2BQ9BPZ2 258 aa13.54□□□□□ -0.24
CLCN2-220ENST00000637538 B4DSR2 109 aa13.54□□□□□ -0.24
CLCN2-220ENST00000637538 H0YIZ8 118 aa13.54□□□□□ -0.24
CLCN2-220ENST00000637538 TSC22D2O75157 780 aa13.54□□□□□ -0.24
CLCN2-220ENST00000637538 ARG1P05089 322 aa13.54□□□□□ -0.24
CLCN2-220ENST00000637538 LYL1P12980 280 aa13.54□□□□□ -0.24
CLCN2-220ENST00000637538 CXCL2P19875 107 aa13.54□□□□□ -0.24
CLCN2-220ENST00000637538 G6PCP35575 357 aa13.54□□□□□ -0.24
CLCN2-220ENST00000637538 OPCMLQ14982 345 aa13.54□□□□□ -0.24
CLCN2-220ENST00000637538 DHRS7BQ6IAN0 325 aaPredicted RBP13.54□□□□□ -0.24
CLCN2-220ENST00000637538 TGIF2LXQ8IUE1 241 aa13.54□□□□□ -0.24
CLCN2-220ENST00000637538 OR8H1Q8NGG4 311 aa13.54□□□□□ -0.24
CLCN2-220ENST00000637538 RNF126Q9BV68 326 aa13.54□□□□□ -0.24
CLCN2-220ENST00000637538 SLC35D1Q9NTN3 355 aa13.54□□□□□ -0.24
CLCN2-220ENST00000637538 GSKIPQ9P0R6 139 aa13.54□□□□□ -0.24
CLCN2-220ENST00000637538 MARCH11A6NNE9 402 aa13.53□□□□□ -0.24
CLCN2-220ENST00000637538 ATG12O94817 140 aa13.53□□□□□ -0.24
CLCN2-220ENST00000637538 KRASP01116 189 aa13.53□□□□□ -0.24
CLCN2-220ENST00000637538 MBPP02686 304 aaPredicted RBP13.53□□□□□ -0.24
CLCN2-220ENST00000637538 HTR1DP28221 377 aa13.53□□□□□ -0.24
CLCN2-220ENST00000637538 AKR1C2P52895 323 aa13.53□□□□□ -0.24
CLCN2-220ENST00000637538 RAB32Q13637 225 aa13.53□□□□□ -0.24
CLCN2-220ENST00000637538 POU2AF1Q16633 256 aa13.53□□□□□ -0.24
CLCN2-220ENST00000637538 IZUMO4Q1ZYL8 232 aa13.53□□□□□ -0.24
CLCN2-220ENST00000637538 MIDNQ504T8 468 aa13.53□□□□□ -0.24
CLCN2-220ENST00000637538 TPTE2P1Q5T6R2 138 aa13.53□□□□□ -0.24
CLCN2-220ENST00000637538 C11orf87Q6NUJ2 197 aa13.53□□□□□ -0.24
CLCN2-220ENST00000637538 TEX261Q6UWH6 196 aa13.53□□□□□ -0.24
CLCN2-220ENST00000637538 R3HDM4Q96D70 268 aa13.53□□□□□ -0.24
CLCN2-220ENST00000637538 RRNAD1Q96FB5 475 aaKnown RBP13.53□□□□□ -0.24
CLCN2-220ENST00000637538 REG4Q9BYZ8 158 aa13.53□□□□□ -0.24
CLCN2-220ENST00000637538 COA4Q9NYJ1 87 aa13.53□□□□□ -0.24
CLCN2-220ENST00000637538 U3KQ87 197 aa13.53□□□□□ -0.24
CLCN2-220ENST00000637538 FXYD6-FXYD2A0A087WZ82 144 aa13.52□□□□□ -0.25
CLCN2-220ENST00000637538 TXNL1O43396 289 aa13.52□□□□□ -0.25
CLCN2-220ENST00000637538 CRYZL1O95825 349 aa13.52□□□□□ -0.25
CLCN2-220ENST00000637538 GAPDHP04406 335 aaKnown RBP13.52□□□□□ -0.25
CLCN2-220ENST00000637538 IGKV1-16P04430 117 aa13.52□□□□□ -0.25
CLCN2-220ENST00000637538 RRASP10301 218 aa13.52□□□□□ -0.25
CLCN2-220ENST00000637538 UBE2E1P51965 193 aa13.52□□□□□ -0.25
CLCN2-220ENST00000637538 SMCO1Q147U7 214 aa13.52□□□□□ -0.25
CLCN2-220ENST00000637538 RTL8BQ17RB0 113 aa13.52□□□□□ -0.25
CLCN2-220ENST00000637538 LRRC37A5PQ49AS3 106 aa13.52□□□□□ -0.25
CLCN2-220ENST00000637538 DPM3Q9P2X0 92 aa13.52□□□□□ -0.25
CLCN2-220ENST00000637538 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.52□□□□□ -0.251e-6■■■■□ 21.3
CLCN2-220ENST00000637538 IGHV1-3A0A0C4DH29 117 aa13.51□□□□□ -0.25
CLCN2-220ENST00000637538 A0A1W2PPI3 338 aa13.51□□□□□ -0.25
CLCN2-220ENST00000637538 LEUTXA8MZ59 168 aa13.51□□□□□ -0.25
CLCN2-220ENST00000637538 RNF223E7ERA6 249 aa13.51□□□□□ -0.25
CLCN2-220ENST00000637538 APOA2P02652 100 aa13.51□□□□□ -0.25
CLCN2-220ENST00000637538 NQO2P16083 231 aa13.51□□□□□ -0.25
CLCN2-220ENST00000637538 S100A11P31949 105 aa13.51□□□□□ -0.25
CLCN2-220ENST00000637538 ID3Q02535 119 aa13.51□□□□□ -0.25
CLCN2-220ENST00000637538 TMEM177Q53S58 311 aa13.51□□□□□ -0.25
CLCN2-220ENST00000637538 MINOS1Q5TGZ0 78 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms