RNA–Protein interactions for RNA: ENST00000637519.1

CHRNA7-228, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5

Gene CHRNA7, Length 2,084 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-228ENST00000637519 TRAV3A0A0B4J244 114 aa17.7■□□□□ 0.42
CHRNA7-228ENST00000637519 I3L521 148 aa17.7■□□□□ 0.42
CHRNA7-228ENST00000637519 ATG12O94817 140 aa17.7■□□□□ 0.42
CHRNA7-228ENST00000637519 METTL15P1P0C7V9 234 aa17.7■□□□□ 0.42
CHRNA7-228ENST00000637519 CT45A6P0DMU7 189 aa17.7■□□□□ 0.42
CHRNA7-228ENST00000637519 CT45A5P0DMU8 189 aa17.7■□□□□ 0.42
CHRNA7-228ENST00000637519 CT45A7P0DMV0 189 aa17.7■□□□□ 0.42
CHRNA7-228ENST00000637519 RPL23AP62750 156 aaKnown RBP17.7■□□□□ 0.42
CHRNA7-228ENST00000637519 TOR2AQ5JU69 321 aa17.7■□□□□ 0.42
CHRNA7-228ENST00000637519 CTNNBIP1Q9NSA3 81 aaPredicted RBP17.7■□□□□ 0.42
CHRNA7-228ENST00000637519 HSPB7Q9UBY9 170 aa17.7■□□□□ 0.42
CHRNA7-228ENST00000637519 MALRD1Q5VYJ5 2156 aa17.7■□□□□ 0.42
CHRNA7-228ENST00000637519 MFSD2BA6NFX1 497 aa17.7■□□□□ 0.42
CHRNA7-228ENST00000637519 A6NNC1 897 aa17.7■□□□□ 0.42
CHRNA7-228ENST00000637519 SPANXN5Q5MJ07 72 aa17.7■□□□□ 0.42
CHRNA7-228ENST00000637519 OR10A7Q8NGE5 316 aa17.7■□□□□ 0.42
CHRNA7-228ENST00000637519 OR1S2Q8NGQ3 325 aa17.7■□□□□ 0.42
CHRNA7-228ENST00000637519 MRPL20Q9BYC9 149 aaKnown RBP17.7■□□□□ 0.42
CHRNA7-228ENST00000637519 PFDN2Q9UHV9 154 aa17.7■□□□□ 0.42
CHRNA7-228ENST00000637519 WSB1Q9Y6I7 421 aa17.7■□□□□ 0.42
CHRNA7-228ENST00000637519 SPTAN1Q13813 2472 aaKnown RBP17.69■□□□□ 0.42
CHRNA7-228ENST00000637519 FGF16O43320 207 aa17.69■□□□□ 0.42
CHRNA7-228ENST00000637519 THBS3P49746 956 aa17.69■□□□□ 0.42
CHRNA7-228ENST00000637519 EIF5AP63241 154 aaKnown RBP17.69■□□□□ 0.42
CHRNA7-228ENST00000637519 ARL16Q0P5N6 197 aa17.69■□□□□ 0.42
CHRNA7-228ENST00000637519 NEU4Q8WWR8 484 aaPredicted RBP17.69■□□□□ 0.42
CHRNA7-228ENST00000637519 BORCS7-ASMTA0A0B4J1R7 106 aa17.68■□□□□ 0.42
CHRNA7-228ENST00000637519 ZNF705EA8MWA4 302 aaPredicted RBP17.68■□□□□ 0.42
CHRNA7-228ENST00000637519 RBFOX2O43251 390 aaKnown RBP eCLIP17.68■□□□□ 0.42
CHRNA7-228ENST00000637519 IGKV1-16P04430 117 aa17.68■□□□□ 0.42
CHRNA7-228ENST00000637519 IGHV1-8P0DP01 117 aa17.68■□□□□ 0.42
CHRNA7-228ENST00000637519 RPS16P62249 146 aaKnown RBP17.68■□□□□ 0.42
CHRNA7-228ENST00000637519 HAPLN4Q86UW8 402 aa17.68■□□□□ 0.42
CHRNA7-228ENST00000637519 OR4S2Q8NH73 311 aa17.68■□□□□ 0.42
CHRNA7-228ENST00000637519 RNF141Q8WVD5 230 aa17.68■□□□□ 0.42
CHRNA7-228ENST00000637519 TMEM140Q9NV12 185 aa17.68■□□□□ 0.42
CHRNA7-228ENST00000637519 OR8B3Q8NGG8 313 aa17.68■□□□□ 0.42
CHRNA7-228ENST00000637519 OR8B2Q96RD0 313 aa17.68■□□□□ 0.42
CHRNA7-228ENST00000637519 ARV1Q9H2C2 271 aa17.68■□□□□ 0.42
CHRNA7-228ENST00000637519 AKAP6Q13023 2319 aa17.67■□□□□ 0.42
CHRNA7-228ENST00000637519 TRBV23-1A0A0A0MS06 115 aa17.67■□□□□ 0.42
CHRNA7-228ENST00000637519 WDR25Q64LD2 544 aaPredicted RBP17.67■□□□□ 0.42
CHRNA7-228ENST00000637519 ZNF833PQ6ZTB9 187 aa17.67■□□□□ 0.42
CHRNA7-228ENST00000637519 STX12Q86Y82 276 aa17.67■□□□□ 0.42
CHRNA7-228ENST00000637519 OR10X1Q8NGY0 326 aa17.67■□□□□ 0.42
CHRNA7-228ENST00000637519 EPG5Q9HCE0 2579 aa17.67■□□□□ 0.42
CHRNA7-228ENST00000637519 FAM90A26D6RGX4 464 aa17.67■□□□□ 0.42
CHRNA7-228ENST00000637519 J3QR06 171 aa17.67■□□□□ 0.42
CHRNA7-228ENST00000637519 NQO2P16083 231 aa17.67■□□□□ 0.42
CHRNA7-228ENST00000637519 SULT1A1P50225 295 aa17.67■□□□□ 0.42
CHRNA7-228ENST00000637519 ERVK-16P61578 105 aa17.67■□□□□ 0.42
CHRNA7-228ENST00000637519 BAXQ07812 192 aa17.67■□□□□ 0.42
CHRNA7-228ENST00000637519 RAB1CQ92928 201 aa17.67■□□□□ 0.42
CHRNA7-228ENST00000637519 TIMD4Q96H15 378 aa17.67■□□□□ 0.42
CHRNA7-228ENST00000637519 SMIM8Q96KF7 97 aa17.67■□□□□ 0.42
CHRNA7-228ENST00000637519 GINS3Q9BRX5 216 aa17.67■□□□□ 0.42
CHRNA7-228ENST00000637519 USP9XQ93008 2570 aaPredicted RBP17.66■□□□□ 0.42
CHRNA7-228ENST00000637519 C22orf46C9J442 243 aa17.66■□□□□ 0.42
CHRNA7-228ENST00000637519 MED6O75586 246 aa17.66■□□□□ 0.42
CHRNA7-228ENST00000637519 FSTL3O95633 263 aa17.66■□□□□ 0.42
CHRNA7-228ENST00000637519 KIR2DS2P43631 304 aa17.66■□□□□ 0.42
CHRNA7-228ENST00000637519 ABHD12Q8N2K0 398 aa17.66■□□□□ 0.42
CHRNA7-228ENST00000637519 NEIL1Q96FI4 390 aaPredicted RBP17.66■□□□□ 0.42
CHRNA7-228ENST00000637519 OR4C12Q96R67 309 aa17.66■□□□□ 0.42
CHRNA7-228ENST00000637519 MED9Q9NWA0 146 aa17.66■□□□□ 0.42
CHRNA7-228ENST00000637519 C1QL1O75973 258 aa17.65■□□□□ 0.42
CHRNA7-228ENST00000637519 TACC2O95359 2948 aa17.65■□□□□ 0.42
CHRNA7-228ENST00000637519 F12P00748 615 aaPredicted RBP17.65■□□□□ 0.42
CHRNA7-228ENST00000637519 RUNX1Q01196 453 aa17.65■□□□□ 0.42
CHRNA7-228ENST00000637519 DTD1Q8TEA8 209 aa17.65■□□□□ 0.42
CHRNA7-228ENST00000637519 CHODLQ9H9P2 273 aa17.65■□□□□ 0.42
CHRNA7-228ENST00000637519 SLC35D1Q9NTN3 355 aa17.65■□□□□ 0.42
CHRNA7-228ENST00000637519 DOCK11Q5JSL3 2073 aa17.65■□□□□ 0.42
CHRNA7-228ENST00000637519 ZNF462Q96JM2 2506 aa17.65■□□□□ 0.42
CHRNA7-228ENST00000637519 PPIAL4CA0A0B4J2A2 164 aa17.65■□□□□ 0.42
CHRNA7-228ENST00000637519 CEBPZOSA8MTT3 80 aa17.65■□□□□ 0.42
CHRNA7-228ENST00000637519 PPIAL4GP0DN37 164 aa17.65■□□□□ 0.42
CHRNA7-228ENST00000637519 RHOVQ96L33 236 aa17.65■□□□□ 0.42
CHRNA7-228ENST00000637519 MIOXQ9UGB7 285 aa17.65■□□□□ 0.42
CHRNA7-228ENST00000637519 SPP1P10451 314 aa17.64■□□□□ 0.41
CHRNA7-228ENST00000637519 MYOD1P15172 320 aa17.64■□□□□ 0.41
CHRNA7-228ENST00000637519 FHITP49789 147 aa17.64■□□□□ 0.41
CHRNA7-228ENST00000637519 SULT1A2P50226 295 aa17.64■□□□□ 0.41
CHRNA7-228ENST00000637519 RELBQ01201 579 aa17.64■□□□□ 0.41
CHRNA7-228ENST00000637519 OR8G2PQ6IF36 304 aa17.64■□□□□ 0.41
CHRNA7-228ENST00000637519 OR4A47Q6IF82 309 aa17.64■□□□□ 0.41
CHRNA7-228ENST00000637519 EIF5AL1Q6IS14 154 aaKnown RBP17.64■□□□□ 0.41
CHRNA7-228ENST00000637519 ADTRPQ96IZ2 230 aa17.64■□□□□ 0.41
CHRNA7-228ENST00000637519 TMEM133Q9H2Q1 129 aa17.64■□□□□ 0.41
CHRNA7-228ENST00000637519 SRRM4A7MD48 611 aaKnown RBP17.63■□□□□ 0.41
CHRNA7-228ENST00000637519 IFNA17P01571 189 aa17.63■□□□□ 0.41
CHRNA7-228ENST00000637519 ATP6V0CP27449 155 aa17.63■□□□□ 0.41
CHRNA7-228ENST00000637519 ZNF266Q14584 549 aa17.63■□□□□ 0.41
CHRNA7-228ENST00000637519 OR4A16Q8NH70 328 aa17.63■□□□□ 0.41
CHRNA7-228ENST00000637519 ATP5SQ99766 215 aa17.63■□□□□ 0.41
CHRNA7-228ENST00000637519 SESN1Q9Y6P5 492 aa17.63■□□□□ 0.41
CHRNA7-228ENST00000637519 ASH1LQ9NR48 2969 aaKnown RBP17.63■□□□□ 0.41
CHRNA7-228ENST00000637519 PXDC1Q5TGL8 231 aa17.63■□□□□ 0.41
CHRNA7-228ENST00000637519 TMEM182Q6ZP80 229 aaPredicted RBP17.63■□□□□ 0.41
CHRNA7-228ENST00000637519 ZNF843Q8N446 348 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms