RNA–Protein interactions for RNA: ENST00000636845.1

RYR3-223, Transcript of ryanodine receptor 3, human

TSL 5

Gene RYR3, Length 2,973 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RYR3-223	ENST00000636845	TGFBR3	Q03167	851 aa		4.54	□□□□□ -1.68
RYR3-223	ENST00000636845	HLA-B	Q31612	363 aa		4.54	□□□□□ -1.68
RYR3-223	ENST00000636845	COX19	Q49B96	90 aa		4.54	□□□□□ -1.68
RYR3-223	ENST00000636845	MRPL54	Q6P161	138 aa	Known RBP	4.54	□□□□□ -1.68
RYR3-223	ENST00000636845		Q6ZSR6	202 aa		4.54	□□□□□ -1.68
RYR3-223	ENST00000636845	WFDC8	Q8IUA0	241 aa		4.54	□□□□□ -1.68
RYR3-223	ENST00000636845	OR2Y1	Q8NGV0	311 aa		4.54	□□□□□ -1.68
RYR3-223	ENST00000636845	OR1L1	Q8NH94	360 aa		4.54	□□□□□ -1.68
RYR3-223	ENST00000636845	RDH5	Q92781	318 aa		4.54	□□□□□ -1.68
RYR3-223	ENST00000636845	RNF125	Q96EQ8	232 aa		4.54	□□□□□ -1.68
RYR3-223	ENST00000636845	UBE2Z	Q9H832	354 aa	Predicted RBP	4.54	□□□□□ -1.68
RYR3-223	ENST00000636845	LIN7C	Q9NUP9	197 aa	Known RBP	4.54	□□□□□ -1.68
RYR3-223	ENST00000636845	MRPL27	Q9P0M9	148 aa	Known RBP	4.54	□□□□□ -1.68
RYR3-223	ENST00000636845	ARL2-SNX15	V9GYD0	113 aa		4.54	□□□□□ -1.68
RYR3-223	ENST00000636845	TDRD6	O60522	2096 aa	Known RBP	4.54	□□□□□ -1.68
RYR3-223	ENST00000636845	MUC21	A0A0G2JKD1	596 aa		4.54	□□□□□ -1.68
RYR3-223	ENST00000636845	MUC21	A0A140T8X8	626 aa		4.54	□□□□□ -1.68
RYR3-223	ENST00000636845	GAGE10	A6NGK3	116 aa		4.54	□□□□□ -1.68
RYR3-223	ENST00000636845	NPIPA3	F8WFD2	350 aa		4.54	□□□□□ -1.68
RYR3-223	ENST00000636845	TAX1BP3	O14907	124 aa		4.54	□□□□□ -1.68
RYR3-223	ENST00000636845	DHH	O43323	396 aa		4.54	□□□□□ -1.68
RYR3-223	ENST00000636845	SAP30	O75446	220 aa		4.54	□□□□□ -1.68
RYR3-223	ENST00000636845	IGKV1-5	P01602	117 aa		4.54	□□□□□ -1.68
RYR3-223	ENST00000636845	CLDN15	P56746	228 aa		4.54	□□□□□ -1.68
RYR3-223	ENST00000636845	PSG9	Q00887	426 aa		4.54	□□□□□ -1.68
RYR3-223	ENST00000636845	MRPL49	Q13405	166 aa	Known RBP	4.54	□□□□□ -1.68
RYR3-223	ENST00000636845	GCSAML	Q5JQS6	135 aa		4.54	□□□□□ -1.68
RYR3-223	ENST00000636845	MUC21	Q5SSG8	566 aa		4.54	□□□□□ -1.68
RYR3-223	ENST00000636845	FAM71F2	Q6NXP2	309 aa		4.54	□□□□□ -1.68
RYR3-223	ENST00000636845	TMEM14EP	Q6UXP3	125 aa		4.54	□□□□□ -1.68
RYR3-223	ENST00000636845	ASCL4	Q6XD76	172 aa		4.54	□□□□□ -1.68
RYR3-223	ENST00000636845	SHISA6	Q6ZSJ9	500 aa		4.54	□□□□□ -1.68
RYR3-223	ENST00000636845	TUSC5	Q8IXB3	177 aa		4.54	□□□□□ -1.68
RYR3-223	ENST00000636845	OR4F17	Q8NGA8	305 aa		4.54	□□□□□ -1.68
RYR3-223	ENST00000636845	TXNDC17	Q9BRA2	123 aa		4.54	□□□□□ -1.68
RYR3-223	ENST00000636845	SFXN3	Q9BWM7	321 aa		4.54	□□□□□ -1.68
RYR3-223	ENST00000636845	ULBP2	Q9BZM5	246 aa		4.54	□□□□□ -1.68
RYR3-223	ENST00000636845	CHODL	Q9H9P2	273 aa		4.54	□□□□□ -1.68
RYR3-223	ENST00000636845	MED12	Q93074	2177 aa		4.54	□□□□□ -1.68
RYR3-223	ENST00000636845	F5	P12259	2224 aa		4.54	□□□□□ -1.68
RYR3-223	ENST00000636845	SAA2-SAA4	A0A096LPE2	208 aa		4.53	□□□□□ -1.68
RYR3-223	ENST00000636845	IGHV3-20	A0A0C4DH32	117 aa		4.53	□□□□□ -1.68
RYR3-223	ENST00000636845		A0A1W2PPC4	97 aa		4.53	□□□□□ -1.68
RYR3-223	ENST00000636845	HLA-DQA1	P01909	254 aa		4.53	□□□□□ -1.68
RYR3-223	ENST00000636845	REG1A	P05451	166 aa		4.53	□□□□□ -1.68
RYR3-223	ENST00000636845	LINC00869	P0C866	280 aa		4.53	□□□□□ -1.68
RYR3-223	ENST00000636845	ARL14EPL	P0DKL9	152 aa		4.53	□□□□□ -1.68
RYR3-223	ENST00000636845	OTX1	P32242	354 aa	Predicted RBP	4.53	□□□□□ -1.68
RYR3-223	ENST00000636845	VEGFB	P49765	207 aa		4.53	□□□□□ -1.68
RYR3-223	ENST00000636845	OR1D5	P58170	312 aa		4.53	□□□□□ -1.68
RYR3-223	ENST00000636845	UBE2G1	P62253	170 aa		4.53	□□□□□ -1.68
RYR3-223	ENST00000636845	RHOB	P62745	196 aa		4.53	□□□□□ -1.68
RYR3-223	ENST00000636845	RSPO1	Q2MKA7	263 aa	Predicted RBP	4.53	□□□□□ -1.68
RYR3-223	ENST00000636845	PDLIM3	Q53GG5	364 aa	Predicted RBP	4.53	□□□□□ -1.68
RYR3-223	ENST00000636845	PRAMEF20	Q5VT98	475 aa		4.53	□□□□□ -1.68
RYR3-223	ENST00000636845	LHFPL4	Q7Z7J7	247 aa		4.53	□□□□□ -1.68
RYR3-223	ENST00000636845	TSKU	Q8WUA8	353 aa		4.53	□□□□□ -1.68
RYR3-223	ENST00000636845	RLN3	Q8WXF3	142 aa		4.53	□□□□□ -1.68
RYR3-223	ENST00000636845	METTL7A	Q9H8H3	244 aa		4.53	□□□□□ -1.68
RYR3-223	ENST00000636845	SERTAD4	Q9NUC0	356 aa		4.53	□□□□□ -1.68
RYR3-223	ENST00000636845	CLCF1	Q9UBD9	225 aa		4.53	□□□□□ -1.68
RYR3-223	ENST00000636845	PEF1	Q9UBV8	284 aa	Known RBP	4.53	□□□□□ -1.68
RYR3-223	ENST00000636845	C19orf25	Q9UFG5	118 aa	Predicted RBP	4.53	□□□□□ -1.68
RYR3-223	ENST00000636845	NOTCH4	Q99466	2003 aa		4.53	□□□□□ -1.68
RYR3-223	ENST00000636845	IGKV3D-11	A0A0A0MRZ8	115 aa		4.53	□□□□□ -1.68
RYR3-223	ENST00000636845	IGKV1-6	A0A0C4DH72	117 aa		4.53	□□□□□ -1.68
RYR3-223	ENST00000636845	GJE1	A6NN92	205 aa		4.53	□□□□□ -1.68
RYR3-223	ENST00000636845	FAM90A26	D6RGX4	464 aa		4.53	□□□□□ -1.68
RYR3-223	ENST00000636845	NDUFS8	O00217	210 aa		4.53	□□□□□ -1.68
RYR3-223	ENST00000636845	EFNA2	O43921	213 aa		4.53	□□□□□ -1.68
RYR3-223	ENST00000636845	IGKV1-39	P01597	117 aa		4.53	□□□□□ -1.68
RYR3-223	ENST00000636845	APCS	P02743	223 aa		4.53	□□□□□ -1.68
RYR3-223	ENST00000636845	IGKV1D-39	P04432	117 aa		4.53	□□□□□ -1.68
RYR3-223	ENST00000636845	MGST1	P10620	155 aa	Known RBP	4.53	□□□□□ -1.68
RYR3-223	ENST00000636845	CA7	P43166	264 aa		4.53	□□□□□ -1.68
RYR3-223	ENST00000636845	DCAF12	Q5T6F0	453 aa		4.53	□□□□□ -1.68
RYR3-223	ENST00000636845	SAMD13	Q5VXD3	122 aa		4.53	□□□□□ -1.68
RYR3-223	ENST00000636845	RHBDD2	Q6NTF9	364 aa		4.53	□□□□□ -1.68
RYR3-223	ENST00000636845	RNASEK	Q6P5S7	137 aa	Known RBP	4.53	□□□□□ -1.68
RYR3-223	ENST00000636845	VWA1	Q6PCB0	445 aa		4.53	□□□□□ -1.68
RYR3-223	ENST00000636845	SLC25A34	Q6PIV7	304 aa		4.53	□□□□□ -1.68
RYR3-223	ENST00000636845		Q6ZS49	121 aa		4.53	□□□□□ -1.68
RYR3-223	ENST00000636845	FGFRL1	Q8N441	504 aa		4.53	□□□□□ -1.68
RYR3-223	ENST00000636845	DEFB125	Q8N687	156 aa		4.53	□□□□□ -1.68
RYR3-223	ENST00000636845	OR4P4	Q8NGL7	312 aa		4.53	□□□□□ -1.68
RYR3-223	ENST00000636845	ABHD17A	Q96GS6	310 aa		4.53	□□□□□ -1.68
RYR3-223	ENST00000636845	FER1L6-AS2	Q96M78	137 aa		4.53	□□□□□ -1.68
RYR3-223	ENST00000636845	ZNF331	Q9NQX6	463 aa	Predicted RBP	4.53	□□□□□ -1.68
RYR3-223	ENST00000636845	BMPR1B	O00238	502 aa		4.53	□□□□□ -1.68
RYR3-223	ENST00000636845	GNG7	O60262	68 aa		4.53	□□□□□ -1.68
RYR3-223	ENST00000636845	CA3	P07451	260 aa		4.53	□□□□□ -1.68
RYR3-223	ENST00000636845	BCL3	P20749	454 aa		4.53	□□□□□ -1.68
RYR3-223	ENST00000636845	FBL	P22087	321 aa	Known RBP	4.53	□□□□□ -1.68
RYR3-223	ENST00000636845	SELENOV	P59797	346 aa		4.53	□□□□□ -1.68
RYR3-223	ENST00000636845	PAX2	Q02962	417 aa		4.53	□□□□□ -1.68
RYR3-223	ENST00000636845	BVES-AS1	Q5T3Y7	98 aa		4.53	□□□□□ -1.68
RYR3-223	ENST00000636845	TMEM108	Q6UXF1	575 aa		4.53	□□□□□ -1.68
RYR3-223	ENST00000636845	GTF2H5	Q6ZYL4	71 aa		4.53	□□□□□ -1.68
RYR3-223	ENST00000636845	MKX	Q8IYA7	352 aa		4.53	□□□□□ -1.68
RYR3-223	ENST00000636845	OR13H1	Q8NG92	308 aa		4.53	□□□□□ -1.68

Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms