RNA–Protein interactions for RNA: ENST00000635120.1

CSMD1-218, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene CSMD1, Length 11,737 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-218ENST00000635120 CDC42EP3Q9UKI2 254 aa7.89□□□□□ -1.15
CSMD1-218ENST00000635120 DTX4Q9Y2E6 619 aa7.89□□□□□ -1.15
CSMD1-218ENST00000635120 C21orf140B9A014 251 aa7.89□□□□□ -1.15
CSMD1-218ENST00000635120 HPRT1P00492 218 aa7.89□□□□□ -1.15
CSMD1-218ENST00000635120 MRPL18Q9H0U6 180 aaKnown RBP7.89□□□□□ -1.15
CSMD1-218ENST00000635120 BEX4Q9NWD9 120 aaPredicted RBP7.89□□□□□ -1.15
CSMD1-218ENST00000635120 TGIF2-C20orf24A0A0A6YYL0 155 aa7.89□□□□□ -1.15
CSMD1-218ENST00000635120 MT-ND6P03923 174 aa7.89□□□□□ -1.15
CSMD1-218ENST00000635120 PRSS2P07478 247 aa7.89□□□□□ -1.15
CSMD1-218ENST00000635120 CCL8P80075 99 aa7.89□□□□□ -1.15
CSMD1-218ENST00000635120 ISXQ2M1V0 245 aa7.89□□□□□ -1.15
CSMD1-218ENST00000635120 SLC25A53Q5H9E4 307 aa7.89□□□□□ -1.15
CSMD1-218ENST00000635120 SCNM1Q9BWG6 230 aa7.89□□□□□ -1.15
CSMD1-218ENST00000635120 DLL1O00548 723 aa7.89□□□□□ -1.15
CSMD1-218ENST00000635120 FAM131CQ96AQ9 280 aa7.89□□□□□ -1.15
CSMD1-218ENST00000635120 LGALS3P17931 250 aaKnown RBP7.89□□□□□ -1.15
CSMD1-218ENST00000635120 GCSAMLQ5JQS6 135 aa7.89□□□□□ -1.15
CSMD1-218ENST00000635120 LRRC3BQ96PB8 259 aa7.89□□□□□ -1.15
CSMD1-218ENST00000635120 MAP1LC3AQ9H492 121 aa7.89□□□□□ -1.15
CSMD1-218ENST00000635120 GGTLC2Q14390 218 aa7.89□□□□□ -1.15
CSMD1-218ENST00000635120 FXYD3Q14802 87 aa7.89□□□□□ -1.15
CSMD1-218ENST00000635120 ATOH7Q8N100 152 aa7.89□□□□□ -1.15
CSMD1-218ENST00000635120 CCL21O00585 134 aa7.89□□□□□ -1.15
CSMD1-218ENST00000635120 VAX1Q5SQQ9 334 aa7.89□□□□□ -1.15
CSMD1-218ENST00000635120 TPRX1Q8N7U7 411 aa7.89□□□□□ -1.15
CSMD1-218ENST00000635120 CCL13Q99616 98 aa7.89□□□□□ -1.15
CSMD1-218ENST00000635120 ELF5Q9UKW6 265 aaPredicted RBP7.89□□□□□ -1.15
CSMD1-218ENST00000635120 PLXNA2O75051 1894 aa7.89□□□□□ -1.15
CSMD1-218ENST00000635120 FAM181BA6NEQ2 426 aa7.88□□□□□ -1.15
CSMD1-218ENST00000635120 TTC32Q5I0X7 151 aa7.88□□□□□ -1.15
CSMD1-218ENST00000635120 LILRA6Q6PI73 481 aa7.88□□□□□ -1.15
CSMD1-218ENST00000635120 ZNF721Q8TF20 911 aa7.88□□□□□ -1.15
CSMD1-218ENST00000635120 SOD3P08294 240 aa7.88□□□□□ -1.15
CSMD1-218ENST00000635120 EMP1P54849 157 aa7.88□□□□□ -1.15
CSMD1-218ENST00000635120 RPL8P62917 257 aaKnown RBP7.88□□□□□ -1.15
CSMD1-218ENST00000635120 ZNF645Q8N7E2 425 aa7.88□□□□□ -1.15
CSMD1-218ENST00000635120 SH3BGRL3Q9H299 93 aa7.88□□□□□ -1.15
CSMD1-218ENST00000635120 UPK3AO75631 287 aa7.88□□□□□ -1.15
CSMD1-218ENST00000635120 TSPAN13O95857 204 aa7.88□□□□□ -1.15
CSMD1-218ENST00000635120 MMP16P51512 607 aa7.88□□□□□ -1.15
CSMD1-218ENST00000635120 PARLQ9H300 379 aa7.88□□□□□ -1.15
CSMD1-218ENST00000635120 MYO9AB2RTY4 2548 aa7.88□□□□□ -1.15
CSMD1-218ENST00000635120 IGHV3-72A0A0B4J1Y9 119 aa7.88□□□□□ -1.15
CSMD1-218ENST00000635120 ERVFRD-1P60508 538 aa7.88□□□□□ -1.15
CSMD1-218ENST00000635120 PRDM14Q9GZV8 571 aa7.88□□□□□ -1.15
CSMD1-218ENST00000635120 WDR54Q9H977 334 aa7.88□□□□□ -1.15
CSMD1-218ENST00000635120 TUBD1Q9UJT1 453 aa7.88□□□□□ -1.15
CSMD1-218ENST00000635120 CEACAM21Q3KPI0 293 aa7.88□□□□□ -1.15
CSMD1-218ENST00000635120 MBNL2Q5VZF2 373 aaKnown RBP7.88□□□□□ -1.15
CSMD1-218ENST00000635120 ADAMTS17Q8TE56 1095 aa7.88□□□□□ -1.15
CSMD1-218ENST00000635120 CBLN4Q9NTU7 201 aa7.88□□□□□ -1.15
CSMD1-218ENST00000635120 IGHV3OR16-12A0A075B7B8 117 aa7.88□□□□□ -1.15
CSMD1-218ENST00000635120 REG1AP05451 166 aa7.88□□□□□ -1.15
CSMD1-218ENST00000635120 FADS6Q8N9I5 356 aa7.88□□□□□ -1.15
CSMD1-218ENST00000635120 ZNF430Q9H8G1 570 aaPredicted RBP7.88□□□□□ -1.15
CSMD1-218ENST00000635120 A0A0G2JMZ2 1700 aa7.88□□□□□ -1.15
CSMD1-218ENST00000635120 LRRC37A2A6NM11 1700 aa7.88□□□□□ -1.15
CSMD1-218ENST00000635120 LRRC37AA6NMS7 1700 aa7.88□□□□□ -1.15
CSMD1-218ENST00000635120 PCNX3Q9H6A9 2034 aa7.88□□□□□ -1.15
CSMD1-218ENST00000635120 RARRES2Q99969 163 aa7.88□□□□□ -1.15
CSMD1-218ENST00000635120 CENPVL1A0A0U1RR11 272 aa7.88□□□□□ -1.15
CSMD1-218ENST00000635120 SSTR5P35346 364 aa7.88□□□□□ -1.15
CSMD1-218ENST00000635120 TMEM45BQ96B21 275 aa7.88□□□□□ -1.15
CSMD1-218ENST00000635120 LINC00587B1AMM8 73 aa7.88□□□□□ -1.15
CSMD1-218ENST00000635120 SRIP30626 198 aa7.88□□□□□ -1.15
CSMD1-218ENST00000635120 SCTP09683 121 aa7.88□□□□□ -1.15
CSMD1-218ENST00000635120 FOXJ2Q9P0K8 574 aa7.88□□□□□ -1.15
CSMD1-218ENST00000635120 MBD1Q9UIS9 605 aaPredicted RBP7.88□□□□□ -1.15
CSMD1-218ENST00000635120 SIRT4Q9Y6E7 314 aaPredicted RBP7.88□□□□□ -1.15
CSMD1-218ENST00000635120 TRBV5-3A0A0A0MS03 114 aa7.87□□□□□ -1.15
CSMD1-218ENST00000635120 FOLR2P14207 255 aa7.87□□□□□ -1.15
CSMD1-218ENST00000635120 SLC25A34Q6PIV7 304 aa7.87□□□□□ -1.15
CSMD1-218ENST00000635120 TMEM136Q6ZRR5 245 aa7.87□□□□□ -1.15
CSMD1-218ENST00000635120 ZNF385AQ96PM9 386 aaKnown RBP7.87□□□□□ -1.15
CSMD1-218ENST00000635120 WNT5BQ9H1J7 359 aa7.87□□□□□ -1.15
CSMD1-218ENST00000635120 NPIPB6E9PJ23 425 aa7.87□□□□□ -1.15
CSMD1-218ENST00000635120 RBFOX2O43251 390 aaKnown RBP eCLIP7.87□□□□□ -1.15
CSMD1-218ENST00000635120 PPP1R17O96001 155 aa7.87□□□□□ -1.15
CSMD1-218ENST00000635120 KLRB1Q12918 225 aa7.87□□□□□ -1.15
CSMD1-218ENST00000635120 C7orf71A4D174 169 aa7.87□□□□□ -1.15
CSMD1-218ENST00000635120 PRF1P14222 555 aa7.87□□□□□ -1.15
CSMD1-218ENST00000635120 CIRBPQ14011 172 aaKnown RBP7.87□□□□□ -1.15
CSMD1-218ENST00000635120 FAM74A4Q5TZK3 123 aa7.87□□□□□ -1.15
CSMD1-218ENST00000635120 WNT2BQ93097 391 aa7.87□□□□□ -1.15
CSMD1-218ENST00000635120 IGKV1D-16P01601 117 aa7.87□□□□□ -1.15
CSMD1-218ENST00000635120 FAM106CPP0CH98 169 aa7.87□□□□□ -1.15
CSMD1-218ENST00000635120 FSTP19883 344 aa7.87□□□□□ -1.15
CSMD1-218ENST00000635120 RPL27AP46776 148 aaKnown RBP7.87□□□□□ -1.15
CSMD1-218ENST00000635120 QTRT1Q9BXR0 403 aaKnown RBP7.87□□□□□ -1.15
CSMD1-218ENST00000635120 A0A1W2PPC1 479 aa7.87□□□□□ -1.15
CSMD1-218ENST00000635120 MPDU1O75352 247 aa7.87□□□□□ -1.15
CSMD1-218ENST00000635120 ID4P47928 161 aa7.87□□□□□ -1.15
CSMD1-218ENST00000635120 JOSD1Q15040 202 aaPredicted RBP7.87□□□□□ -1.15
CSMD1-218ENST00000635120 DCAF10Q5QP82 559 aa7.87□□□□□ -1.15
CSMD1-218ENST00000635120 OR4C13Q8NGP0 309 aa7.87□□□□□ -1.15
CSMD1-218ENST00000635120 TTTY12Q9BZ98 90 aa7.87□□□□□ -1.15
CSMD1-218ENST00000635120 NPVFQ9HCQ7 196 aa7.87□□□□□ -1.15
CSMD1-218ENST00000635120 H0YL77 283 aa7.87□□□□□ -1.15
CSMD1-218ENST00000635120 LEPROTL1O95214 131 aa7.87□□□□□ -1.15
CSMD1-218ENST00000635120 DNAL4O96015 105 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms