RNA–Protein interactions for RNA: ENST00000629912.1

NEK3-211, Transcript of NIMA related kinase 3, humanhuman

TSL 5 BASIC

Gene NEK3, Length 141 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-211ENST00000629912 DCAF16Q9NXF7 216 aa4.58□□□□□ -1.68
NEK3-211ENST00000629912 SLC25A10Q9UBX3 287 aaPredicted RBP4.58□□□□□ -1.68
NEK3-211ENST00000629912 CARHSP1Q9Y2V2 147 aaKnown RBP4.58□□□□□ -1.68
NEK3-211ENST00000629912 TIMM9Q9Y5J7 89 aa4.58□□□□□ -1.68
NEK3-211ENST00000629912 SPTBN4Q9H254 2564 aa4.58□□□□□ -1.68
NEK3-211ENST00000629912 ROS1P08922 2347 aa4.57□□□□□ -1.68
NEK3-211ENST00000629912 A0A087X0M5 115 aa4.57□□□□□ -1.68
NEK3-211ENST00000629912 TRAV1-1A0A0B4J248 108 aa4.57□□□□□ -1.68
NEK3-211ENST00000629912 IGHV1-69-2A0A0G2JMI3 117 aa4.57□□□□□ -1.68
NEK3-211ENST00000629912 A0A1B0GX30 115 aa4.57□□□□□ -1.68
NEK3-211ENST00000629912 TMEM8BA6NDV4 472 aa4.57□□□□□ -1.68
NEK3-211ENST00000629912 MARCH11A6NNE9 402 aa4.57□□□□□ -1.68
NEK3-211ENST00000629912 FAM157AC9JC47 383 aa4.57□□□□□ -1.68
NEK3-211ENST00000629912 GPR37O15354 613 aa4.57□□□□□ -1.68
NEK3-211ENST00000629912 SLC31A2O15432 143 aa4.57□□□□□ -1.68
NEK3-211ENST00000629912 SIAH2O43255 324 aa4.57□□□□□ -1.68
NEK3-211ENST00000629912 FCN3O75636 299 aa4.57□□□□□ -1.68
NEK3-211ENST00000629912 SCO1O75880 301 aa4.57□□□□□ -1.68
NEK3-211ENST00000629912 NXPH3O95157 252 aa4.57□□□□□ -1.68
NEK3-211ENST00000629912 PLAUP00749 431 aa4.57□□□□□ -1.68
NEK3-211ENST00000629912 APOC3P02656 99 aa4.57□□□□□ -1.68
NEK3-211ENST00000629912 PRH1P02810 166 aa4.57□□□□□ -1.68
NEK3-211ENST00000629912 METTL15P1P0C7V9 234 aa4.57□□□□□ -1.68
NEK3-211ENST00000629912 IAPPP10997 89 aa4.57□□□□□ -1.68
NEK3-211ENST00000629912 NDUFB7P17568 137 aa4.57□□□□□ -1.68
NEK3-211ENST00000629912 MDKP21741 143 aaPredicted RBP4.57□□□□□ -1.68
NEK3-211ENST00000629912 PPOXP50336 477 aa4.57□□□□□ -1.68
NEK3-211ENST00000629912 DLX6P56179 175 aa4.57□□□□□ -1.68
NEK3-211ENST00000629912 LINC00205P59089 165 aa4.57□□□□□ -1.68
NEK3-211ENST00000629912 RPL31P62899 125 aaKnown RBP4.57□□□□□ -1.68
NEK3-211ENST00000629912 SRSF3P84103 164 aaKnown RBP4.57□□□□□ -1.68
NEK3-211ENST00000629912 RELBQ01201 579 aa4.57□□□□□ -1.68
NEK3-211ENST00000629912 TFF3Q07654 80 aa4.57□□□□□ -1.68
NEK3-211ENST00000629912 PMS2P11Q13670 270 aa4.57□□□□□ -1.68
NEK3-211ENST00000629912 VWC2Q2TAL6 325 aa4.57□□□□□ -1.68
NEK3-211ENST00000629912 RPL39P5Q59GN2 51 aa4.57□□□□□ -1.68
NEK3-211ENST00000629912 LRRC10Q5BKY1 277 aa4.57□□□□□ -1.68
NEK3-211ENST00000629912 OR2B11Q5JQS5 317 aa4.57□□□□□ -1.68
NEK3-211ENST00000629912 SPANXN5Q5MJ07 72 aa4.57□□□□□ -1.68
NEK3-211ENST00000629912 DHRS7BQ6IAN0 325 aaPredicted RBP4.57□□□□□ -1.68
NEK3-211ENST00000629912 FAM71F2Q6NXP2 309 aa4.57□□□□□ -1.68
NEK3-211ENST00000629912 LYPD2Q6UXB3 125 aa4.57□□□□□ -1.68
NEK3-211ENST00000629912 UNQ6494/PRO21346Q6UXR6 183 aa4.57□□□□□ -1.68
NEK3-211ENST00000629912 TMEM182Q6ZP80 229 aaPredicted RBP4.57□□□□□ -1.68
NEK3-211ENST00000629912 ZNF833PQ6ZTB9 187 aa4.57□□□□□ -1.68
NEK3-211ENST00000629912 ZNF429Q86V71 674 aa4.57□□□□□ -1.68
NEK3-211ENST00000629912 MUC15Q8N387 334 aa4.57□□□□□ -1.68
NEK3-211ENST00000629912 TMEM217Q8N7C4 229 aa4.57□□□□□ -1.68
NEK3-211ENST00000629912 ZNF383Q8NA42 475 aa4.57□□□□□ -1.68
NEK3-211ENST00000629912 OR4A16Q8NH70 328 aa4.57□□□□□ -1.68
NEK3-211ENST00000629912 OR4S2Q8NH73 311 aa4.57□□□□□ -1.68
NEK3-211ENST00000629912 DTD1Q8TEA8 209 aa4.57□□□□□ -1.68
NEK3-211ENST00000629912 MBD3L1Q8WWY6 194 aa4.57□□□□□ -1.68
NEK3-211ENST00000629912 ZCCHC14Q8WYQ9 949 aaKnown RBP4.57□□□□□ -1.68
NEK3-211ENST00000629912 RAB39BQ96DA2 213 aa4.57□□□□□ -1.68
NEK3-211ENST00000629912 OR4C12Q96R67 309 aa4.57□□□□□ -1.68
NEK3-211ENST00000629912 SH3BGRL3Q9H299 93 aa4.57□□□□□ -1.68
NEK3-211ENST00000629912 TREM1Q9NP99 234 aa4.57□□□□□ -1.68
NEK3-211ENST00000629912 TET2Q6N021 2002 aaPredicted RBP4.56□□□□□ -1.68
NEK3-211ENST00000629912 SAA2-SAA4A0A096LPE2 208 aa4.56□□□□□ -1.68
NEK3-211ENST00000629912 TRBV23-1A0A0A0MS06 115 aa4.56□□□□□ -1.68
NEK3-211ENST00000629912 MEX3AA1L020 520 aaKnown RBP4.56□□□□□ -1.68
NEK3-211ENST00000629912 FAM90A27PA6NNH2 459 aa4.56□□□□□ -1.68
NEK3-211ENST00000629912 F8W036 122 aa4.56□□□□□ -1.68
NEK3-211ENST00000629912 DVL1O14640 695 aa4.56□□□□□ -1.68
NEK3-211ENST00000629912 SOX15O60248 233 aa4.56□□□□□ -1.68
NEK3-211ENST00000629912 MMP23AO75900 390 aa4.56□□□□□ -1.68
NEK3-211ENST00000629912 HRASP01112 189 aa4.56□□□□□ -1.68
NEK3-211ENST00000629912 HBE1P02100 147 aa4.56□□□□□ -1.68
NEK3-211ENST00000629912 H2AFB1P0C5Y9 115 aa4.56□□□□□ -1.68
NEK3-211ENST00000629912 OR9G9P0C7N8 305 aa4.56□□□□□ -1.68
NEK3-211ENST00000629912 SAA2P0DJI9 122 aaPredicted RBP4.56□□□□□ -1.68
NEK3-211ENST00000629912 CT45A6P0DMU7 189 aa4.56□□□□□ -1.68
NEK3-211ENST00000629912 CT45A5P0DMU8 189 aa4.56□□□□□ -1.68
NEK3-211ENST00000629912 CT45A7P0DMV0 189 aa4.56□□□□□ -1.68
NEK3-211ENST00000629912 AGAP20933 346 aa4.56□□□□□ -1.68
NEK3-211ENST00000629912 COL8A2P25067 703 aa4.56□□□□□ -1.68
NEK3-211ENST00000629912 NFYBP25208 207 aa4.56□□□□□ -1.68
NEK3-211ENST00000629912 GRNP28799 593 aaKnown RBP4.56□□□□□ -1.68
NEK3-211ENST00000629912 VDAC2P45880 294 aaPredicted RBP4.56□□□□□ -1.68
NEK3-211ENST00000629912 FHITP49789 147 aa4.56□□□□□ -1.68
NEK3-211ENST00000629912 ATP5IP56385 69 aaPredicted RBP4.56□□□□□ -1.68
NEK3-211ENST00000629912 ERVK-16P61578 105 aa4.56□□□□□ -1.68
NEK3-211ENST00000629912 HSPE1P61604 102 aaKnown RBP4.56□□□□□ -1.68
NEK3-211ENST00000629912 RPP30P78346 268 aaKnown RBP4.56□□□□□ -1.68
NEK3-211ENST00000629912 DEFA5Q01523 94 aa4.56□□□□□ -1.68
NEK3-211ENST00000629912 TLE4Q04727 773 aa4.56□□□□□ -1.68
NEK3-211ENST00000629912 SLC38A11Q08AI6 406 aa4.56□□□□□ -1.68
NEK3-211ENST00000629912 TMEM267Q0VDI3 215 aaPredicted RBP4.56□□□□□ -1.68
NEK3-211ENST00000629912 GUK1Q16774 197 aa4.56□□□□□ -1.68
NEK3-211ENST00000629912 HFEQ30201 348 aa4.56□□□□□ -1.68
NEK3-211ENST00000629912 UTF1Q5T230 341 aa4.56□□□□□ -1.68
NEK3-211ENST00000629912 AKR1C8PQ5T2L2 129 aa4.56□□□□□ -1.68
NEK3-211ENST00000629912 PRAMEF5Q5TYX0 476 aa4.56□□□□□ -1.68
NEK3-211ENST00000629912 SPSB3Q6PJ21 355 aa4.56□□□□□ -1.68
NEK3-211ENST00000629912 ATRAIDQ6UW56 229 aa4.56□□□□□ -1.68
NEK3-211ENST00000629912 THNSL2Q86YJ6 484 aa4.56□□□□□ -1.68
NEK3-211ENST00000629912 LYG1Q8N1E2 194 aa4.56□□□□□ -1.68
NEK3-211ENST00000629912 SVBPQ8N300 66 aa4.56□□□□□ -1.68
NEK3-211ENST00000629912 OR10P1Q8NGE3 313 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms