RNA–Protein interactions for RNA: ENST00000628857.1

CNOT1-223, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 5 BASIC

Gene CNOT1, Length 291 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-223ENST00000628857 PSG9Q00887 426 aa2.22□□□□□ -2.05
CNOT1-223ENST00000628857 MYL5Q02045 173 aa2.22□□□□□ -2.05
CNOT1-223ENST00000628857 PSG7Q13046 419 aa2.22□□□□□ -2.05
CNOT1-223ENST00000628857 PRDX4Q13162 271 aa2.22□□□□□ -2.05
CNOT1-223ENST00000628857 IHHQ14623 411 aa2.22□□□□□ -2.05
CNOT1-223ENST00000628857 GLYATL3Q5SZD4 288 aa2.22□□□□□ -2.05
CNOT1-223ENST00000628857 LCE3EQ5T5B0 92 aa2.22□□□□□ -2.05
CNOT1-223ENST00000628857 BCL2L15Q5TBC7 163 aa2.22□□□□□ -2.05
CNOT1-223ENST00000628857 SPATA31B1PQ5VZV4 182 aa2.22□□□□□ -2.05
CNOT1-223ENST00000628857 ZNF773Q6PK81 442 aa2.22□□□□□ -2.05
CNOT1-223ENST00000628857 ALKAL1Q6UXT8 129 aa2.22□□□□□ -2.05
CNOT1-223ENST00000628857 STAC2Q6ZMT1 411 aa2.22□□□□□ -2.05
CNOT1-223ENST00000628857 ZNF705AQ6ZN79 300 aaPredicted RBP2.22□□□□□ -2.05
CNOT1-223ENST00000628857 SLC35E3Q7Z769 313 aa2.22□□□□□ -2.05
CNOT1-223ENST00000628857 TMEM150AQ86TG1 271 aa2.22□□□□□ -2.05
CNOT1-223ENST00000628857 GKN2Q86XP6 184 aa2.22□□□□□ -2.05
CNOT1-223ENST00000628857 PRR22Q8IZ63 422 aa2.22□□□□□ -2.05
CNOT1-223ENST00000628857 ZNF433Q8N7K0 673 aaPredicted RBP2.22□□□□□ -2.05
CNOT1-223ENST00000628857 FER1L6-AS1Q8NA97 138 aa2.22□□□□□ -2.05
CNOT1-223ENST00000628857 C5orf17Q8NAS9 161 aa2.22□□□□□ -2.05
CNOT1-223ENST00000628857 ZNF436-AS1Q8NC38 126 aaPredicted RBP2.22□□□□□ -2.05
CNOT1-223ENST00000628857 KLHL30-AS1Q8NEE0 82 aa2.22□□□□□ -2.05
CNOT1-223ENST00000628857 OR11G2Q8NGC1 345 aa2.22□□□□□ -2.05
CNOT1-223ENST00000628857 OR10AD1Q8NGE0 317 aa2.22□□□□□ -2.05
CNOT1-223ENST00000628857 OR51T1Q8NGJ9 327 aa2.22□□□□□ -2.05
CNOT1-223ENST00000628857 OR10D3Q8NH80 312 aa2.22□□□□□ -2.05
CNOT1-223ENST00000628857 PPTC7Q8NI37 304 aa2.22□□□□□ -2.05
CNOT1-223ENST00000628857 RAB2BQ8WUD1 216 aa2.22□□□□□ -2.05
CNOT1-223ENST00000628857 PP6455Q8WZ26 134 aa2.22□□□□□ -2.05
CNOT1-223ENST00000628857 TMEM106AQ96A25 262 aa2.22□□□□□ -2.05
CNOT1-223ENST00000628857 PLEKHB2Q96CS7 222 aa2.22□□□□□ -2.05
CNOT1-223ENST00000628857 SLAMF6Q96DU3 332 aa2.22□□□□□ -2.05
CNOT1-223ENST00000628857 PHYHIPLQ96FC7 376 aa2.22□□□□□ -2.05
CNOT1-223ENST00000628857 ZNF414Q96IQ9 312 aa2.22□□□□□ -2.05
CNOT1-223ENST00000628857 SEC22AQ96IW7 307 aa2.22□□□□□ -2.05
CNOT1-223ENST00000628857 AP1S3Q96PC3 154 aa2.22□□□□□ -2.05
CNOT1-223ENST00000628857 DERL3Q96Q80 235 aa2.22□□□□□ -2.05
CNOT1-223ENST00000628857 TSPAN32Q96QS1 320 aa2.22□□□□□ -2.05
CNOT1-223ENST00000628857 PITX2Q99697 317 aa2.22□□□□□ -2.05
CNOT1-223ENST00000628857 MCHR1Q99705 422 aa2.22□□□□□ -2.05
CNOT1-223ENST00000628857 HSD17B10Q99714 261 aaKnown RBP2.22□□□□□ -2.05
CNOT1-223ENST00000628857 MIEN1Q9BRT3 115 aa2.22□□□□□ -2.05
CNOT1-223ENST00000628857 PRADC1Q9BSG0 188 aa2.22□□□□□ -2.05
CNOT1-223ENST00000628857 CHST6Q9GZX3 395 aa2.22□□□□□ -2.05
CNOT1-223ENST00000628857 MED28Q9H204 178 aa2.22□□□□□ -2.05
CNOT1-223ENST00000628857 Q9HAA7 133 aa2.22□□□□□ -2.05
CNOT1-223ENST00000628857 NOX3Q9HBY0 568 aa2.22□□□□□ -2.05
CNOT1-223ENST00000628857 SMCO4Q9NRQ5 59 aa2.22□□□□□ -2.05
CNOT1-223ENST00000628857 RBM22Q9NW64 420 aaKnown RBP eCLIP2.22□□□□□ -2.05
CNOT1-223ENST00000628857 DMAC2Q9NW81 257 aa2.22□□□□□ -2.05
CNOT1-223ENST00000628857 ZNF586Q9NXT0 402 aa2.22□□□□□ -2.05
CNOT1-223ENST00000628857 KCNIP1Q9NZI2 227 aa2.22□□□□□ -2.05
CNOT1-223ENST00000628857 DNAJC27Q9NZQ0 273 aa2.22□□□□□ -2.05
CNOT1-223ENST00000628857 DHRS4-AS1Q9P1J3 65 aa2.22□□□□□ -2.05
CNOT1-223ENST00000628857 ANXA10Q9UJ72 324 aa2.22□□□□□ -2.05
CNOT1-223ENST00000628857 CYSLTR1Q9Y271 337 aa2.22□□□□□ -2.05
CNOT1-223ENST00000628857 KDM6AO15550 1401 aaPredicted RBP2.22□□□□□ -2.05
CNOT1-223ENST00000628857 ITGB4P16144 1822 aa2.21□□□□□ -2.05
CNOT1-223ENST00000628857 ZNF638Q14966 1978 aaKnown RBP2.21□□□□□ -2.05
CNOT1-223ENST00000628857 NFASCO94856 1347 aa2.21□□□□□ -2.06
CNOT1-223ENST00000628857 COL16A1Q07092 1604 aaPredicted RBP2.21□□□□□ -2.06
CNOT1-223ENST00000628857 MROH1Q8NDA8 1641 aa2.21□□□□□ -2.06
CNOT1-223ENST00000628857 UBR2Q8IWV8 1755 aa2.21□□□□□ -2.06
CNOT1-223ENST00000628857 TMED7-TICAM2A0A0A6YYA0 188 aa2.21□□□□□ -2.06
CNOT1-223ENST00000628857 TRAV5A0A0B4J249 113 aa2.21□□□□□ -2.06
CNOT1-223ENST00000628857 TEX50A0A1B0GTY4 177 aa2.21□□□□□ -2.06
CNOT1-223ENST00000628857 LOC102725191A0A1B0GVB3 256 aa2.21□□□□□ -2.06
CNOT1-223ENST00000628857 A0A1B0GW64 132 aa2.21□□□□□ -2.06
CNOT1-223ENST00000628857 RBFOX3A6NFN3 312 aa2.21□□□□□ -2.06
CNOT1-223ENST00000628857 RIIAD1A6NNX1 92 aa2.21□□□□□ -2.06
CNOT1-223ENST00000628857 DISP2A7MBM2 1401 aa2.21□□□□□ -2.06
CNOT1-223ENST00000628857 ZNF850A8MQ14 1090 aa2.21□□□□□ -2.06
CNOT1-223ENST00000628857 BBIP1A8MTZ0 92 aa2.21□□□□□ -2.06
CNOT1-223ENST00000628857 ZNF253O75346 499 aa2.21□□□□□ -2.06
CNOT1-223ENST00000628857 REM1O75628 298 aa2.21□□□□□ -2.06
CNOT1-223ENST00000628857 P01737 135 aa2.21□□□□□ -2.06
CNOT1-223ENST00000628857 IGKV5-2P06315 115 aa2.21□□□□□ -2.06
CNOT1-223ENST00000628857 SCTP09683 121 aa2.21□□□□□ -2.06
CNOT1-223ENST00000628857 OR4A8P0C604 315 aa2.21□□□□□ -2.06
CNOT1-223ENST00000628857 OR12D1P0DN82 309 aa2.21□□□□□ -2.06
CNOT1-223ENST00000628857 HIST1H1DP16402 221 aaKnown RBP2.21□□□□□ -2.06
CNOT1-223ENST00000628857 CXCL2P19875 107 aa2.21□□□□□ -2.06
CNOT1-223ENST00000628857 TSPOP30536 169 aa2.21□□□□□ -2.06
CNOT1-223ENST00000628857 IL2RGP31785 369 aa2.21□□□□□ -2.06
CNOT1-223ENST00000628857 CXCL12P48061 93 aa2.21□□□□□ -2.06
CNOT1-223ENST00000628857 SLC18A1P54219 525 aa2.21□□□□□ -2.06
CNOT1-223ENST00000628857 TPPP2P59282 170 aa2.21□□□□□ -2.06
CNOT1-223ENST00000628857 UBE2NP61088 152 aaKnown RBP2.21□□□□□ -2.06
CNOT1-223ENST00000628857 GNG11P61952 73 aa2.21□□□□□ -2.06
CNOT1-223ENST00000628857 GRB2P62993 217 aaKnown RBP2.21□□□□□ -2.06
CNOT1-223ENST00000628857 IGLV3-21P80748 117 aaPredicted RBP2.21□□□□□ -2.06
CNOT1-223ENST00000628857 HOXC5Q00444 222 aa2.21□□□□□ -2.06
CNOT1-223ENST00000628857 IFITM3Q01628 133 aa2.21□□□□□ -2.06
CNOT1-223ENST00000628857 SLC25A11Q02978 314 aaKnown RBP2.21□□□□□ -2.06
CNOT1-223ENST00000628857 PRDX1Q06830 199 aaKnown RBP2.21□□□□□ -2.06
CNOT1-223ENST00000628857 TMEM267Q0VDI3 215 aaPredicted RBP2.21□□□□□ -2.06
CNOT1-223ENST00000628857 IL15RAQ13261 267 aa2.21□□□□□ -2.06
CNOT1-223ENST00000628857 TIGITQ495A1 244 aa2.21□□□□□ -2.06
CNOT1-223ENST00000628857 IBA57Q5T440 356 aaKnown RBP2.21□□□□□ -2.06
CNOT1-223ENST00000628857 LYRM7Q5U5X0 104 aa2.21□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms