RNA–Protein interactions for RNA: ENST00000628347.1

SOX2-OT-247, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 445 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-247ENST00000628347 TINAGL1Q9GZM7 467 aaPredicted RBP9.55□□□□□ -0.88
SOX2-OT-247ENST00000628347 TNCP24821 2201 aa9.54□□□□□ -0.88
SOX2-OT-247ENST00000628347 SHISA3A0PJX4 238 aa9.54□□□□□ -0.88
SOX2-OT-247ENST00000628347 IFITM5A6NNB3 132 aa9.54□□□□□ -0.88
SOX2-OT-247ENST00000628347 CNIH1O95406 144 aa9.54□□□□□ -0.88
SOX2-OT-247ENST00000628347 HIST1H1DP16402 221 aaKnown RBP9.54□□□□□ -0.88
SOX2-OT-247ENST00000628347 AADACP22760 399 aa9.54□□□□□ -0.88
SOX2-OT-247ENST00000628347 PJVKQ0ZLH3 352 aa9.54□□□□□ -0.88
SOX2-OT-247ENST00000628347 KLF5Q13887 457 aaPredicted RBP9.54□□□□□ -0.88
SOX2-OT-247ENST00000628347 RTL8BQ17RB0 113 aa9.54□□□□□ -0.88
SOX2-OT-247ENST00000628347 MRGPRG-AS1Q2M3A8 158 aa9.54□□□□□ -0.88
SOX2-OT-247ENST00000628347 Q8N1Y9 231 aa9.54□□□□□ -0.88
SOX2-OT-247ENST00000628347 BVESQ8NE79 360 aa9.54□□□□□ -0.88
SOX2-OT-247ENST00000628347 OR5T1Q8NG75 326 aa9.54□□□□□ -0.88
SOX2-OT-247ENST00000628347 DDB2Q92466 427 aa9.54□□□□□ -0.88
SOX2-OT-247ENST00000628347 ADTRPQ96IZ2 230 aa9.54□□□□□ -0.88
SOX2-OT-247ENST00000628347 TM2D3Q9BRN9 247 aa9.54□□□□□ -0.88
SOX2-OT-247ENST00000628347 ZMAT4Q9H898 229 aa9.54□□□□□ -0.88
SOX2-OT-247ENST00000628347 ZNF355PQ9NSJ1 428 aa9.54□□□□□ -0.88
SOX2-OT-247ENST00000628347 TRDV1A0A1B0GX56 115 aa9.53□□□□□ -0.88
SOX2-OT-247ENST00000628347 SRRM4A7MD48 611 aaKnown RBP9.53□□□□□ -0.88
SOX2-OT-247ENST00000628347 SHOXO15266 292 aa9.53□□□□□ -0.88
SOX2-OT-247ENST00000628347 GNB3P16520 340 aa9.53□□□□□ -0.88
SOX2-OT-247ENST00000628347 GALP22466 123 aa9.53□□□□□ -0.88
SOX2-OT-247ENST00000628347 DUTP33316 252 aaKnown RBP9.53□□□□□ -0.88
SOX2-OT-247ENST00000628347 HSPA13P48723 471 aa9.53□□□□□ -0.88
SOX2-OT-247ENST00000628347 OR10A3P58181 314 aa9.53□□□□□ -0.88
SOX2-OT-247ENST00000628347 UBE2KP61086 200 aa9.53□□□□□ -0.88
SOX2-OT-247ENST00000628347 ARL6IP1Q15041 203 aa9.53□□□□□ -0.88
SOX2-OT-247ENST00000628347 CASC10Q5T4H9 136 aa9.53□□□□□ -0.88
SOX2-OT-247ENST00000628347 ZNF343Q6P1L6 599 aa9.53□□□□□ -0.88
SOX2-OT-247ENST00000628347 ANKRD13BQ86YJ7 626 aa9.53□□□□□ -0.88
SOX2-OT-247ENST00000628347 H1FOOQ8IZA3 346 aaPredicted RBP9.53□□□□□ -0.88
SOX2-OT-247ENST00000628347 TEX45Q8NA69 505 aa9.53□□□□□ -0.88
SOX2-OT-247ENST00000628347 USMG5Q96IX5 58 aa9.53□□□□□ -0.88
SOX2-OT-247ENST00000628347 VCX3BQ9H321 246 aa9.53□□□□□ -0.88
SOX2-OT-247ENST00000628347 C19orf73Q9NVV2 129 aa9.53□□□□□ -0.88
SOX2-OT-247ENST00000628347 NDUFB11Q9NX14 153 aa9.53□□□□□ -0.88
SOX2-OT-247ENST00000628347 SIGLEC8Q9NYZ4 499 aa9.53□□□□□ -0.88
SOX2-OT-247ENST00000628347 BLOC1S6Q9UL45 172 aa9.53□□□□□ -0.88
SOX2-OT-247ENST00000628347 PLECQ15149 4684 aaKnown RBP9.53□□□□□ -0.88
SOX2-OT-247ENST00000628347 METTL21EPA6NDL7 271 aa9.52□□□□□ -0.89
SOX2-OT-247ENST00000628347 IGHV4-30-4P0DP06 118 aa9.52□□□□□ -0.89
SOX2-OT-247ENST00000628347 RAB3BP20337 219 aa9.52□□□□□ -0.89
SOX2-OT-247ENST00000628347 DTYMKP23919 212 aa9.52□□□□□ -0.89
SOX2-OT-247ENST00000628347 MYL9P24844 172 aa9.52□□□□□ -0.89
SOX2-OT-247ENST00000628347 DYRK1AQ13627 763 aa9.52□□□□□ -0.89
SOX2-OT-247ENST00000628347 VMA21Q3ZAQ7 101 aa9.52□□□□□ -0.89
SOX2-OT-247ENST00000628347 IL34Q6ZMJ4 242 aa9.52□□□□□ -0.89
SOX2-OT-247ENST00000628347 HAPLN4Q86UW8 402 aa9.52□□□□□ -0.89
SOX2-OT-247ENST00000628347 SGPP2Q8IWX5 399 aa9.52□□□□□ -0.89
SOX2-OT-247ENST00000628347 OR9G4Q8NGQ1 327 aa9.52□□□□□ -0.89
SOX2-OT-247ENST00000628347 OSR1Q8TAX0 266 aaPredicted RBP9.52□□□□□ -0.89
SOX2-OT-247ENST00000628347 MAFIPQ8WZ33 124 aa9.52□□□□□ -0.89
SOX2-OT-247ENST00000628347 CITED4Q96RK1 184 aa9.52□□□□□ -0.89
SOX2-OT-247ENST00000628347 GINS4Q9BRT9 223 aa9.52□□□□□ -0.89
SOX2-OT-247ENST00000628347 PEF1Q9UBV8 284 aaKnown RBP9.52□□□□□ -0.89
SOX2-OT-247ENST00000628347 ZNF230Q9UIE0 474 aaPredicted RBP9.52□□□□□ -0.89
SOX2-OT-247ENST00000628347 ANKRD34BA5PLL1 514 aa9.51□□□□□ -0.89
SOX2-OT-247ENST00000628347 LINC00473A8K010 186 aa9.51□□□□□ -0.89
SOX2-OT-247ENST00000628347 H0Y980 276 aa9.51□□□□□ -0.89
SOX2-OT-247ENST00000628347 LCE2BO14633 110 aa9.51□□□□□ -0.89
SOX2-OT-247ENST00000628347 TALDO1P37837 337 aa9.51□□□□□ -0.89
SOX2-OT-247ENST00000628347 PRSS8Q16651 343 aa9.51□□□□□ -0.89
SOX2-OT-247ENST00000628347 ADAD2Q8NCV1 583 aaKnown RBP9.51□□□□□ -0.89
SOX2-OT-247ENST00000628347 RSRP1Q9BUV0 290 aa9.51□□□□□ -0.89
SOX2-OT-247ENST00000628347 RBM7Q9Y580 266 aaKnown RBP9.51□□□□□ -0.89
SOX2-OT-247ENST00000628347 A0A075B6Q4 140 aa9.5□□□□□ -0.89
SOX2-OT-247ENST00000628347 IGKV1D-8A0A087WSZ0 117 aa9.5□□□□□ -0.89
SOX2-OT-247ENST00000628347 MSGN1A6NI15 193 aa9.5□□□□□ -0.89
SOX2-OT-247ENST00000628347 MRPS14O60783 128 aaKnown RBP9.5□□□□□ -0.89
SOX2-OT-247ENST00000628347 CRYZL1O95825 349 aa9.5□□□□□ -0.89
SOX2-OT-247ENST00000628347 OR9G9P0C7N8 305 aa9.5□□□□□ -0.89
SOX2-OT-247ENST00000628347 SYNJ2BPP57105 145 aa9.5□□□□□ -0.89
SOX2-OT-247ENST00000628347 ARFRP1Q13795 201 aa9.5□□□□□ -0.89
SOX2-OT-247ENST00000628347 TATDN3Q17R31 274 aa9.5□□□□□ -0.89
SOX2-OT-247ENST00000628347 IZUMO2Q6UXV1 221 aa9.5□□□□□ -0.89
SOX2-OT-247ENST00000628347 ZNF645Q8N7E2 425 aa9.5□□□□□ -0.89
SOX2-OT-247ENST00000628347 SRSF12Q8WXF0 261 aaKnown RBP9.5□□□□□ -0.89
SOX2-OT-247ENST00000628347 PHB2Q99623 299 aa9.5□□□□□ -0.89
SOX2-OT-247ENST00000628347 THAP7Q9BT49 309 aaPredicted RBP9.5□□□□□ -0.89
SOX2-OT-247ENST00000628347 COA4Q9NYJ1 87 aa9.5□□□□□ -0.89
SOX2-OT-247ENST00000628347 TRBV9A0A0B4J1U6 114 aa9.49□□□□□ -0.89
SOX2-OT-247ENST00000628347 A0A0B4J203 849 aa9.49□□□□□ -0.89
SOX2-OT-247ENST00000628347 FAM223BA6NKX1 122 aa9.49□□□□□ -0.89
SOX2-OT-247ENST00000628347 CREBL2O60519 120 aaPredicted RBP9.49□□□□□ -0.89
SOX2-OT-247ENST00000628347 RBMXL2O75526 392 aaKnown RBP9.49□□□□□ -0.89
SOX2-OT-247ENST00000628347 SLC22A5O76082 557 aa9.49□□□□□ -0.89
SOX2-OT-247ENST00000628347 OR2A4O95047 310 aa9.49□□□□□ -0.89
SOX2-OT-247ENST00000628347 TRBV12-3P01733 135 aa9.49□□□□□ -0.89
SOX2-OT-247ENST00000628347 HLA-DQB1P01920 261 aa9.49□□□□□ -0.89
SOX2-OT-247ENST00000628347 CSN3P07498 182 aa9.49□□□□□ -0.89
SOX2-OT-247ENST00000628347 CTXN2P0C2S0 81 aa9.49□□□□□ -0.89
SOX2-OT-247ENST00000628347 MECP2P51608 486 aaKnown RBP9.49□□□□□ -0.89
SOX2-OT-247ENST00000628347 GABARAPL2P60520 117 aa9.49□□□□□ -0.89
SOX2-OT-247ENST00000628347 CDK10Q15131 360 aa9.49□□□□□ -0.89
SOX2-OT-247ENST00000628347 TNXAQ16473 311 aa9.49□□□□□ -0.89
SOX2-OT-247ENST00000628347 NR2C2APQ86WQ0 139 aa9.49□□□□□ -0.89
SOX2-OT-247ENST00000628347 FAM223AQ8IWN6 122 aa9.49□□□□□ -0.89
SOX2-OT-247ENST00000628347 Q8N402 240 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms