RNA–Protein interactions for RNA: ENST00000628306.2

CAPNS1-216, Transcript of calpain small subunit 1, humanhuman

TSL 5 BASIC

Gene CAPNS1, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-216ENST00000628306 UXS1Q8NBZ7 420 aa19.4■□□□□ 0.7
CAPNS1-216ENST00000628306 CASTOR1Q8WTX7 329 aa19.4■□□□□ 0.7
CAPNS1-216ENST00000628306 EDARADDQ8WWZ3 215 aa19.4■□□□□ 0.7
CAPNS1-216ENST00000628306 CCL28Q9NRJ3 127 aa19.4■□□□□ 0.7
CAPNS1-216ENST00000628306 SSTR5P35346 364 aa19.39■□□□□ 0.69
CAPNS1-216ENST00000628306 H2BFSP57053 126 aa19.39■□□□□ 0.69
CAPNS1-216ENST00000628306 CYCSP99999 105 aaKnown RBP19.39■□□□□ 0.69
CAPNS1-216ENST00000628306 TMEM187Q14656 261 aa19.39■□□□□ 0.69
CAPNS1-216ENST00000628306 C17orf58Q2M2W7 97 aa19.39■□□□□ 0.69
CAPNS1-216ENST00000628306 ANKRD55Q3KP44 614 aa19.39■□□□□ 0.69
CAPNS1-216ENST00000628306 ZNF818PQ6ZRF7 136 aa19.39■□□□□ 0.69
CAPNS1-216ENST00000628306 REC114Q7Z4M0 266 aa19.39■□□□□ 0.69
CAPNS1-216ENST00000628306 KLHDC1Q8N7A1 406 aa19.39■□□□□ 0.69
CAPNS1-216ENST00000628306 GAB2Q9UQC2 676 aa19.39■□□□□ 0.69
CAPNS1-216ENST00000628306 M0R1W7 72 aa19.38■□□□□ 0.69
CAPNS1-216ENST00000628306 GOSR2O14653 212 aa19.38■□□□□ 0.69
CAPNS1-216ENST00000628306 PGLYRP1O75594 196 aaPredicted RBP19.38■□□□□ 0.69
CAPNS1-216ENST00000628306 PAX6P26367 422 aa19.38■□□□□ 0.69
CAPNS1-216ENST00000628306 LOXL3P58215 753 aa19.38■□□□□ 0.69
CAPNS1-216ENST00000628306 OXLD1Q5BKU9 147 aa19.38■□□□□ 0.69
CAPNS1-216ENST00000628306 OR52L2PQ8NGH6 319 aa19.38■□□□□ 0.69
CAPNS1-216ENST00000628306 SSX3Q99909 188 aa19.38■□□□□ 0.69
CAPNS1-216ENST00000628306 TRBV23-1A0A0A0MS06 115 aa19.37■□□□□ 0.69
CAPNS1-216ENST00000628306 C3orf85A0A1B0GTC6 90 aa19.37■□□□□ 0.69
CAPNS1-216ENST00000628306 Q3ZCU0 254 aa19.37■□□□□ 0.69
CAPNS1-216ENST00000628306 PHLDA2Q53GA4 152 aa19.37■□□□□ 0.69
CAPNS1-216ENST00000628306 LIAT1Q6ZQX7 453 aa19.37■□□□□ 0.69
CAPNS1-216ENST00000628306 PIFOQ8TCI5 191 aa19.37■□□□□ 0.69
CAPNS1-216ENST00000628306 GLYATL2Q8WU03 294 aa19.37■□□□□ 0.69
CAPNS1-216ENST00000628306 H1FXQ92522 213 aaKnown RBP19.37■□□□□ 0.69
CAPNS1-216ENST00000628306 MEGF9Q9H1U4 602 aa19.37■□□□□ 0.69
CAPNS1-216ENST00000628306 METTL8Q9H825 291 aaKnown RBP19.37■□□□□ 0.69
CAPNS1-216ENST00000628306 CHST1O43916 411 aa19.36■□□□□ 0.69
CAPNS1-216ENST00000628306 IGLV2-14P01704 120 aa19.36■□□□□ 0.69
CAPNS1-216ENST00000628306 OR8U9P0C7N5 309 aa19.36■□□□□ 0.69
CAPNS1-216ENST00000628306 NDUFB7P17568 137 aa19.36■□□□□ 0.69
CAPNS1-216ENST00000628306 RPL31P62899 125 aaKnown RBP19.36■□□□□ 0.69
CAPNS1-216ENST00000628306 LY6EQ16553 131 aa19.36■□□□□ 0.69
CAPNS1-216ENST00000628306 MORN2Q502X0 79 aa19.36■□□□□ 0.69
CAPNS1-216ENST00000628306 NCR3LG1Q68D85 454 aa19.36■□□□□ 0.69
CAPNS1-216ENST00000628306 LGI3Q8N145 548 aa19.36■□□□□ 0.69
CAPNS1-216ENST00000628306 ZNF645Q8N7E2 425 aa19.36■□□□□ 0.69
CAPNS1-216ENST00000628306 OR2T35Q8NGX2 323 aa19.36■□□□□ 0.69
CAPNS1-216ENST00000628306 OR8U1Q8NH10 309 aa19.36■□□□□ 0.69
CAPNS1-216ENST00000628306 RFESDQ8TAC1 157 aa19.36■□□□□ 0.69
CAPNS1-216ENST00000628306 IL22RA2Q969J5 263 aa19.36■□□□□ 0.69
CAPNS1-216ENST00000628306 TMEM56Q96MV1 263 aa19.36■□□□□ 0.69
CAPNS1-216ENST00000628306 TMEM222Q9H0R3 208 aa19.36■□□□□ 0.69
CAPNS1-216ENST00000628306 GAL3ST2Q9H3Q3 398 aa19.36■□□□□ 0.69
CAPNS1-216ENST00000628306 TMEM56-RWDD3S4R434 201 aa19.36■□□□□ 0.69
CAPNS1-216ENST00000628306 F2RP25116 425 aa19.35■□□□□ 0.69
CAPNS1-216ENST00000628306 FGL1Q08830 312 aa19.35■□□□□ 0.69
CAPNS1-216ENST00000628306 GSG1LQ6UXU4 331 aa19.35■□□□□ 0.69
CAPNS1-216ENST00000628306 TCF23Q7RTU1 214 aa19.35■□□□□ 0.69
CAPNS1-216ENST00000628306 TBC1D26Q86UD7 250 aa19.35■□□□□ 0.69
CAPNS1-216ENST00000628306 TCTEX1D1Q8N7M0 179 aa19.35■□□□□ 0.69
CAPNS1-216ENST00000628306 WIPF2Q8TF74 440 aaPredicted RBP19.35■□□□□ 0.69
CAPNS1-216ENST00000628306 AGMATQ9BSE5 352 aa19.35■□□□□ 0.69
CAPNS1-216ENST00000628306 FAM212BQ9NTI7 297 aaPredicted RBP19.35■□□□□ 0.69
CAPNS1-216ENST00000628306 GFOD1Q9NXC2 390 aa19.35■□□□□ 0.69
CAPNS1-216ENST00000628306 RBM7Q9Y580 266 aaKnown RBP19.35■□□□□ 0.69
CAPNS1-216ENST00000628306 DUXBA0A1W2PPF3 345 aa19.34■□□□□ 0.69
CAPNS1-216ENST00000628306 ADARB2-AS1A8MUL3 147 aa19.34■□□□□ 0.69
CAPNS1-216ENST00000628306 H0Y980 276 aa19.34■□□□□ 0.69
CAPNS1-216ENST00000628306 OR5AC1P0C628 307 aa19.34■□□□□ 0.69
CAPNS1-216ENST00000628306 UCP1P25874 307 aa19.34■□□□□ 0.69
CAPNS1-216ENST00000628306 LYG1Q8N1E2 194 aa19.34■□□□□ 0.69
CAPNS1-216ENST00000628306 MRAPQ8TCY5 172 aa19.34■□□□□ 0.69
CAPNS1-216ENST00000628306 IDI2-AS1Q9NZ38 188 aa19.34■□□□□ 0.69
CAPNS1-216ENST00000628306 GNG12Q9UBI6 72 aa19.34■□□□□ 0.69
CAPNS1-216ENST00000628306 HSD17B6O14756 317 aa19.33■□□□□ 0.69
CAPNS1-216ENST00000628306 CDS2O95674 445 aa19.33■□□□□ 0.69
CAPNS1-216ENST00000628306 PPP1CCP36873 323 aaKnown RBP19.33■□□□□ 0.69
CAPNS1-216ENST00000628306 RAB7AP51149 207 aa19.33■□□□□ 0.69
CAPNS1-216ENST00000628306 TMEM200BQ69YZ2 307 aa19.33■□□□□ 0.69
CAPNS1-216ENST00000628306 OR4C13Q8NGP0 309 aa19.33■□□□□ 0.69
CAPNS1-216ENST00000628306 UBALD1Q8TB05 177 aa19.33■□□□□ 0.69
CAPNS1-216ENST00000628306 NMES1Q9C002 83 aa19.33■□□□□ 0.69
CAPNS1-216ENST00000628306 SERTAD4Q9NUC0 356 aa19.33■□□□□ 0.69
CAPNS1-216ENST00000628306 AURKAIP1Q9NWT8 199 aaPredicted RBP19.33■□□□□ 0.69
CAPNS1-216ENST00000628306 SIX6O95475 246 aa19.32■□□□□ 0.68
CAPNS1-216ENST00000628306 IFNA21P01568 189 aa19.32■□□□□ 0.68
CAPNS1-216ENST00000628306 GNMTQ14749 295 aa19.32■□□□□ 0.68
CAPNS1-216ENST00000628306 AANATQ16613 207 aa19.32■□□□□ 0.68
CAPNS1-216ENST00000628306 LRRC75BQ2VPJ9 315 aa19.32■□□□□ 0.68
CAPNS1-216ENST00000628306 HEPN1Q6WQI6 88 aa19.32■□□□□ 0.68
CAPNS1-216ENST00000628306 C11orf42Q8N5U0 333 aa19.32■□□□□ 0.68
CAPNS1-216ENST00000628306 DRAM1Q8N682 238 aa19.32■□□□□ 0.68
CAPNS1-216ENST00000628306 DRAXINQ8NBI3 349 aaPredicted RBP19.32■□□□□ 0.68
CAPNS1-216ENST00000628306 PARP12Q9H0J9 701 aaKnown RBP19.32■□□□□ 0.68
CAPNS1-216ENST00000628306 TMED3Q9Y3Q3 217 aa19.32■□□□□ 0.68
CAPNS1-216ENST00000628306 G3V3Q6 166 aa19.32■□□□□ 0.68
CAPNS1-216ENST00000628306 EIF4EBP1Q13541 118 aaPredicted RBP19.32■□□□□ 0.68
CAPNS1-216ENST00000628306 ZNF66Q6ZN08 573 aa19.32■□□□□ 0.68
CAPNS1-216ENST00000628306 C8orf31Q8N9H6 132 aa19.32■□□□□ 0.68
CAPNS1-216ENST00000628306 OR2T6Q8NHC8 308 aa19.32■□□□□ 0.68
CAPNS1-216ENST00000628306 C2orf50Q96LR7 162 aa19.32■□□□□ 0.68
CAPNS1-216ENST00000628306 TP53RKQ96S44 253 aa19.32■□□□□ 0.68
CAPNS1-216ENST00000628306 ZNF702PQ9H963 129 aa19.32■□□□□ 0.68
CAPNS1-216ENST00000628306 C19orf12Q9NSK7 152 aa19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms