RNA–Protein interactions for RNA: ENST00000627317.1

PNKP-221, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 767 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-221ENST00000627317 BVESQ8NE79 360 aa11.73□□□□□ -0.53
PNKP-221ENST00000627317 OR8H1Q8NGG4 311 aa11.73□□□□□ -0.53
PNKP-221ENST00000627317 OR51S1Q8NGJ8 323 aa11.73□□□□□ -0.53
PNKP-221ENST00000627317 OR4F5Q8NH21 305 aa11.73□□□□□ -0.53
PNKP-221ENST00000627317 RBMXL1Q96E39 390 aaKnown RBP11.73□□□□□ -0.53
PNKP-221ENST00000627317 CCDC32Q9BV29 185 aa11.73□□□□□ -0.53
PNKP-221ENST00000627317 HRASLSQ9HDD0 168 aa11.73□□□□□ -0.53
PNKP-221ENST00000627317 A0A1B0GUS0 222 aa11.72□□□□□ -0.53
PNKP-221ENST00000627317 LINC00854A0A1B0GVQ3 168 aa11.72□□□□□ -0.53
PNKP-221ENST00000627317 FCGR3BO75015 233 aa11.72□□□□□ -0.53
PNKP-221ENST00000627317 RLN1P04808 185 aa11.72□□□□□ -0.53
PNKP-221ENST00000627317 KIR2DS2P43631 304 aa11.72□□□□□ -0.53
PNKP-221ENST00000627317 RPL30P62888 115 aaKnown RBP11.72□□□□□ -0.53
PNKP-221ENST00000627317 EIF4EBP1Q13541 118 aaPredicted RBP11.72□□□□□ -0.53
PNKP-221ENST00000627317 ABCA11PQ4W5N1 156 aa11.72□□□□□ -0.53
PNKP-221ENST00000627317 PRR31Q5SQ13 230 aa11.72□□□□□ -0.53
PNKP-221ENST00000627317 IDO2Q6ZQW0 420 aa11.72□□□□□ -0.53
PNKP-221ENST00000627317 OR51H1Q8NH63 302 aa11.72□□□□□ -0.53
PNKP-221ENST00000627317 SGMS2Q8NHU3 365 aa11.72□□□□□ -0.53
PNKP-221ENST00000627317 ZFAND1Q8TCF1 268 aa11.72□□□□□ -0.53
PNKP-221ENST00000627317 DDB2Q92466 427 aa11.72□□□□□ -0.53
PNKP-221ENST00000627317 FLYWCH2Q96CP2 140 aaKnown RBP11.72□□□□□ -0.53
PNKP-221ENST00000627317 GPHA2Q96T91 129 aa11.72□□□□□ -0.53
PNKP-221ENST00000627317 RSRP1Q9BUV0 290 aa11.72□□□□□ -0.53
PNKP-221ENST00000627317 RANBP3Q9H6Z4 567 aaPredicted RBP11.72□□□□□ -0.53
PNKP-221ENST00000627317 SLC2A8Q9NY64 477 aa11.72□□□□□ -0.53
PNKP-221ENST00000627317 KIAA1456Q9P272 454 aa11.72□□□□□ -0.53
PNKP-221ENST00000627317 CLPSL1A2RUU4 121 aa11.71□□□□□ -0.53
PNKP-221ENST00000627317 NBR2O15453 112 aa11.71□□□□□ -0.53
PNKP-221ENST00000627317 FGF16O43320 207 aa11.71□□□□□ -0.53
PNKP-221ENST00000627317 PEX14O75381 377 aa11.71□□□□□ -0.53
PNKP-221ENST00000627317 CRYZL1O95825 349 aa11.71□□□□□ -0.53
PNKP-221ENST00000627317 IGKV1-16P04430 117 aa11.71□□□□□ -0.53
PNKP-221ENST00000627317 CD40LGP29965 261 aa11.71□□□□□ -0.53
PNKP-221ENST00000627317 RPS16P62249 146 aaKnown RBP11.71□□□□□ -0.53
PNKP-221ENST00000627317 ARSJQ5FYB0 599 aaPredicted RBP11.71□□□□□ -0.53
PNKP-221ENST00000627317 Q6ZSV7 163 aa11.71□□□□□ -0.53
PNKP-221ENST00000627317 C5orf56Q8N8D9 126 aa11.71□□□□□ -0.53
PNKP-221ENST00000627317 POC5Q8NA72 575 aa11.71□□□□□ -0.53
PNKP-221ENST00000627317 OR13C8Q8NGS7 320 aa11.71□□□□□ -0.53
PNKP-221ENST00000627317 OR4S2Q8NH73 311 aa11.71□□□□□ -0.53
PNKP-221ENST00000627317 LINC01006Q8NI28 216 aa11.71□□□□□ -0.53
PNKP-221ENST00000627317 MARCH1Q8TCQ1 289 aa11.71□□□□□ -0.53
PNKP-221ENST00000627317 HARBI1Q96MB7 349 aa11.71□□□□□ -0.53
PNKP-221ENST00000627317 TSNAXQ99598 290 aaKnown RBP11.71□□□□□ -0.53
PNKP-221ENST00000627317 PRSS22Q9GZN4 317 aa11.71□□□□□ -0.53
PNKP-221ENST00000627317 C16orf95Q9H693 158 aa11.71□□□□□ -0.53
PNKP-221ENST00000627317 BEX1Q9HBH7 125 aa11.71□□□□□ -0.53
PNKP-221ENST00000627317 LIN7CQ9NUP9 197 aaKnown RBP11.71□□□□□ -0.53
PNKP-221ENST00000627317 C14orf166Q9Y224 244 aaKnown RBP11.71□□□□□ -0.53
PNKP-221ENST00000627317 CENPXA8MT69 81 aa11.7□□□□□ -0.54
PNKP-221ENST00000627317 SHOXO15266 292 aa11.7□□□□□ -0.54
PNKP-221ENST00000627317 TSPAN9O75954 239 aa11.7□□□□□ -0.54
PNKP-221ENST00000627317 PI3P19957 117 aa11.7□□□□□ -0.54
PNKP-221ENST00000627317 CNTFRP26992 372 aa11.7□□□□□ -0.54
PNKP-221ENST00000627317 PROK1P58294 105 aa11.7□□□□□ -0.54
PNKP-221ENST00000627317 KRTAP10-3P60369 221 aa11.7□□□□□ -0.54
PNKP-221ENST00000627317 PLGLAQ15195 96 aa11.7□□□□□ -0.54
PNKP-221ENST00000627317 SURF2Q15527 256 aaPredicted RBP11.7□□□□□ -0.54
PNKP-221ENST00000627317 C9orf152Q5JTZ5 239 aa11.7□□□□□ -0.54
PNKP-221ENST00000627317 ZNF486Q96H40 463 aaPredicted RBP11.7□□□□□ -0.54
PNKP-221ENST00000627317 RNF5Q99942 180 aa11.7□□□□□ -0.54
PNKP-221ENST00000627317 RASL11BQ9BPW5 248 aa11.7□□□□□ -0.54
PNKP-221ENST00000627317 C7orf50Q9BRJ6 194 aaKnown RBP11.7□□□□□ -0.54
PNKP-221ENST00000627317 SLC2A9Q9NRM0 540 aa11.7□□□□□ -0.54
PNKP-221ENST00000627317 NAP1L6A6NFF2 107 aa11.69□□□□□ -0.54
PNKP-221ENST00000627317 PGLYRP1O75594 196 aaPredicted RBP11.69□□□□□ -0.54
PNKP-221ENST00000627317 SPDEFO95238 335 aa11.69□□□□□ -0.54
PNKP-221ENST00000627317 CTSDP07339 412 aaPredicted RBP11.69□□□□□ -0.54
PNKP-221ENST00000627317 F2RL1P55085 397 aa11.69□□□□□ -0.54
PNKP-221ENST00000627317 PIGPP57054 158 aa11.69□□□□□ -0.54
PNKP-221ENST00000627317 SRSF4Q08170 494 aaKnown RBP11.69□□□□□ -0.54
PNKP-221ENST00000627317 TMEM177Q53S58 311 aa11.69□□□□□ -0.54
PNKP-221ENST00000627317 C11orf88Q6PI97 169 aa11.69□□□□□ -0.54
PNKP-221ENST00000627317 TBC1D26Q86UD7 250 aa11.69□□□□□ -0.54
PNKP-221ENST00000627317 SPAG16Q8N0X2 631 aa11.69□□□□□ -0.54
PNKP-221ENST00000627317 Q8N9W7 124 aa11.69□□□□□ -0.54
PNKP-221ENST00000627317 CCDC71LQ8N9Z2 235 aa11.69□□□□□ -0.54
PNKP-221ENST00000627317 OR2T6Q8NHC8 308 aa11.69□□□□□ -0.54
PNKP-221ENST00000627317 OSR1Q8TAX0 266 aaPredicted RBP11.69□□□□□ -0.54
PNKP-221ENST00000627317 MRGPRFQ96AM1 343 aa11.69□□□□□ -0.54
PNKP-221ENST00000627317 RITA1Q96K30 269 aa11.69□□□□□ -0.54
PNKP-221ENST00000627317 SCGB3A2Q96PL1 93 aa11.69□□□□□ -0.54
PNKP-221ENST00000627317 CITED1Q99966 193 aa11.69□□□□□ -0.54
PNKP-221ENST00000627317 ZNF702PQ9H963 129 aa11.69□□□□□ -0.54
PNKP-221ENST00000627317 PLSCR3Q9NRY6 295 aa11.69□□□□□ -0.54
PNKP-221ENST00000627317 COPZ2Q9P299 210 aa11.69□□□□□ -0.54
PNKP-221ENST00000627317 SH2D7A6NKC9 451 aaPredicted RBP11.68□□□□□ -0.54
PNKP-221ENST00000627317 RRHO14718 337 aa11.68□□□□□ -0.54
PNKP-221ENST00000627317 AMY1AP04745 511 aa11.68□□□□□ -0.54
PNKP-221ENST00000627317 LGALS7P47929 136 aa11.68□□□□□ -0.54
PNKP-221ENST00000627317 RND3P61587 244 aa11.68□□□□□ -0.54
PNKP-221ENST00000627317 BLCAPP62952 87 aa11.68□□□□□ -0.54
PNKP-221ENST00000627317 C5orf64Q2M2E5 130 aa11.68□□□□□ -0.54
PNKP-221ENST00000627317 FAM71E2Q8N5Q1 922 aa11.68□□□□□ -0.54
PNKP-221ENST00000627317 NPBQ8NG41 125 aa11.68□□□□□ -0.54
PNKP-221ENST00000627317 CD300LFQ8TDQ1 290 aa11.68□□□□□ -0.54
PNKP-221ENST00000627317 RBFOX2O43251 390 aaKnown RBP eCLIP11.67□□□□□ -0.541e-6■■■■□ 23.3
PNKP-221ENST00000627317 SLC25A17O43808 307 aa11.67□□□□□ -0.54
PNKP-221ENST00000627317 NDUFA3O95167 84 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms