RNA–Protein interactions for RNA: ENST00000627253.1

SNORD3E-202, Transcript of small nucleolar RNA, C/D box 3E, humanhuman

BASIC

Gene SNORD3E, Length 216 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD3E-202ENST00000627253 EMC3Q9P0I2 261 aa0.53□□□□□ -2.32
SNORD3E-202ENST00000627253 NOSIPQ9Y314 301 aaKnown RBP0.53□□□□□ -2.32
SNORD3E-202ENST00000627253 HDGFL3Q9Y3E1 203 aa0.53□□□□□ -2.32
SNORD3E-202ENST00000627253 CCDC88CQ9P219 2028 aa0.53□□□□□ -2.32
SNORD3E-202ENST00000627253 A0A1W2PP64 1363 aa0.53□□□□□ -2.32
SNORD3E-202ENST00000627253 MED12LQ86YW9 2145 aa0.53□□□□□ -2.32
SNORD3E-202ENST00000627253 RTEL1-TNFRSF6BF6WH68 1400 aa0.53□□□□□ -2.32
SNORD3E-202ENST00000627253 EIF4G1Q04637 1599 aaKnown RBP0.53□□□□□ -2.33
SNORD3E-202ENST00000627253 FN1P02751 2386 aaKnown RBP0.53□□□□□ -2.33
SNORD3E-202ENST00000627253 STRCP1A6NGW2 1772 aa0.52□□□□□ -2.33
SNORD3E-202ENST00000627253 COL11A1P12107 1806 aaPredicted RBP0.52□□□□□ -2.33
SNORD3E-202ENST00000627253 PLXNA3P51805 1871 aa0.52□□□□□ -2.33
SNORD3E-202ENST00000627253 PTPRSQ13332 1948 aa0.52□□□□□ -2.33
SNORD3E-202ENST00000627253 DICER1Q9UPY3 1922 aaKnown RBP0.52□□□□□ -2.33
SNORD3E-202ENST00000627253 MICAL3Q7RTP6 2002 aa0.52□□□□□ -2.33
SNORD3E-202ENST00000627253 A0A0G2JQZ4 141 aa0.52□□□□□ -2.33
SNORD3E-202ENST00000627253 MDFIC2A0A1B0GVS7 189 aa0.52□□□□□ -2.33
SNORD3E-202ENST00000627253 A0A1B0GW54 56 aa0.52□□□□□ -2.33
SNORD3E-202ENST00000627253 VPS37CA5D8V6 355 aaPredicted RBP0.52□□□□□ -2.33
SNORD3E-202ENST00000627253 ARRDC5A6NEK1 342 aa0.52□□□□□ -2.33
SNORD3E-202ENST00000627253 C11orf86A6NJI1 115 aa0.52□□□□□ -2.33
SNORD3E-202ENST00000627253 EVPLLA8MZ36 301 aa0.52□□□□□ -2.33
SNORD3E-202ENST00000627253 OR11H12B2RN74 326 aa0.52□□□□□ -2.33
SNORD3E-202ENST00000627253 M0QZ92 97 aa0.52□□□□□ -2.33
SNORD3E-202ENST00000627253 CXCR6O00574 342 aa0.52□□□□□ -2.33
SNORD3E-202ENST00000627253 SLC16A4O15374 487 aa0.52□□□□□ -2.33
SNORD3E-202ENST00000627253 NIPSNAP2O75323 286 aa0.52□□□□□ -2.33
SNORD3E-202ENST00000627253 KRT75O95678 551 aa0.52□□□□□ -2.33
SNORD3E-202ENST00000627253 NPYP01303 97 aa0.52□□□□□ -2.33
SNORD3E-202ENST00000627253 IL6P05231 212 aa0.52□□□□□ -2.33
SNORD3E-202ENST00000627253 HLA-DQB2P05538 268 aa0.52□□□□□ -2.33
SNORD3E-202ENST00000627253 KRT7P08729 469 aa0.52□□□□□ -2.33
SNORD3E-202ENST00000627253 OCM2P0CE71 109 aa0.52□□□□□ -2.33
SNORD3E-202ENST00000627253 RPS12P25398 132 aaKnown RBP0.52□□□□□ -2.33
SNORD3E-202ENST00000627253 DDTP30046 118 aa0.52□□□□□ -2.33
SNORD3E-202ENST00000627253 RPL12P30050 165 aaKnown RBP0.52□□□□□ -2.33
SNORD3E-202ENST00000627253 XCL1P47992 114 aa0.52□□□□□ -2.33
SNORD3E-202ENST00000627253 REG1BP48304 166 aa0.52□□□□□ -2.33
SNORD3E-202ENST00000627253 CDK9P50750 372 aaKnown RBP0.52□□□□□ -2.33
SNORD3E-202ENST00000627253 CTBP2P56545 445 aa0.52□□□□□ -2.33
SNORD3E-202ENST00000627253 RBM11P57052 281 aaKnown RBP0.52□□□□□ -2.33
SNORD3E-202ENST00000627253 TMEM33P57088 247 aa0.52□□□□□ -2.33
SNORD3E-202ENST00000627253 CXCR4P61073 352 aa0.52□□□□□ -2.33
SNORD3E-202ENST00000627253 FKBP1AP62942 108 aaKnown RBP0.52□□□□□ -2.33
SNORD3E-202ENST00000627253 HLA-DRB3P79483 266 aa0.52□□□□□ -2.33
SNORD3E-202ENST00000627253 ZNF90Q03938 601 aa0.52□□□□□ -2.33
SNORD3E-202ENST00000627253 RELAQ04206 551 aa0.52□□□□□ -2.33
SNORD3E-202ENST00000627253 HES1Q14469 280 aa0.52□□□□□ -2.33
SNORD3E-202ENST00000627253 PABPC1L2AQ5JQF8 200 aa0.52□□□□□ -2.33
SNORD3E-202ENST00000627253 SAPCD1Q5SSQ6 148 aa0.52□□□□□ -2.33
SNORD3E-202ENST00000627253 CLVS2Q5SYC1 327 aa0.52□□□□□ -2.33
SNORD3E-202ENST00000627253 C1orf194Q5T5A4 169 aa0.52□□□□□ -2.33
SNORD3E-202ENST00000627253 N4BP2L1Q5TBK1 243 aaPredicted RBP0.52□□□□□ -2.33
SNORD3E-202ENST00000627253 TNFAIP8L2Q6P589 184 aaPredicted RBP0.52□□□□□ -2.33
SNORD3E-202ENST00000627253 AGTRAPQ6RW13 159 aa0.52□□□□□ -2.33
SNORD3E-202ENST00000627253 LRRN1Q6UXK5 716 aa0.52□□□□□ -2.33
SNORD3E-202ENST00000627253 Q6ZTI0 123 aa0.52□□□□□ -2.33
SNORD3E-202ENST00000627253 GLT6D1Q7Z4J2 308 aa0.52□□□□□ -2.33
SNORD3E-202ENST00000627253 SPATA12Q7Z6I5 190 aa0.52□□□□□ -2.33
SNORD3E-202ENST00000627253 COMMD7Q86VX2 200 aa0.52□□□□□ -2.33
SNORD3E-202ENST00000627253 LRRC34Q8IZ02 419 aa0.52□□□□□ -2.33
SNORD3E-202ENST00000627253 SLC35F6Q8N357 371 aa0.52□□□□□ -2.33
SNORD3E-202ENST00000627253 DAND5Q8N907 189 aa0.52□□□□□ -2.33
SNORD3E-202ENST00000627253 CNEP1R1Q8N9A8 125 aa0.52□□□□□ -2.33
SNORD3E-202ENST00000627253 TMEM161BQ8NDZ6 487 aa0.52□□□□□ -2.33
SNORD3E-202ENST00000627253 OR11H2Q8NH07 326 aa0.52□□□□□ -2.33
SNORD3E-202ENST00000627253 JOSD2Q8TAC2 188 aa0.52□□□□□ -2.33
SNORD3E-202ENST00000627253 PIGXQ8TBF5 258 aa0.52□□□□□ -2.33
SNORD3E-202ENST00000627253 HAVCR2Q8TDQ0 301 aa0.52□□□□□ -2.33
SNORD3E-202ENST00000627253 SMCR5Q8TEV8 140 aa0.52□□□□□ -2.33
SNORD3E-202ENST00000627253 EEF1AKMT1Q8WVE0 214 aa0.52□□□□□ -2.33
SNORD3E-202ENST00000627253 RAB8BQ92930 207 aa0.52□□□□□ -2.33
SNORD3E-202ENST00000627253 TESCQ96BS2 214 aa0.52□□□□□ -2.33
SNORD3E-202ENST00000627253 SFRP2Q96HF1 295 aa0.52□□□□□ -2.33
SNORD3E-202ENST00000627253 MIEN1Q9BRT3 115 aa0.52□□□□□ -2.33
SNORD3E-202ENST00000627253 TMEM109Q9BVC6 243 aa0.52□□□□□ -2.33
SNORD3E-202ENST00000627253 TMEM222Q9H0R3 208 aa0.52□□□□□ -2.33
SNORD3E-202ENST00000627253 FGFR1OP2Q9NVK5 253 aa0.52□□□□□ -2.33
SNORD3E-202ENST00000627253 BABAM2Q9NXR7 383 aa0.52□□□□□ -2.33
SNORD3E-202ENST00000627253 NKIRAS1Q9NYS0 192 aa0.52□□□□□ -2.33
SNORD3E-202ENST00000627253 USE1Q9NZ43 259 aa0.52□□□□□ -2.33
SNORD3E-202ENST00000627253 DKKL1Q9UK85 242 aa0.52□□□□□ -2.33
SNORD3E-202ENST00000627253 POLR1DQ9Y2S0 133 aa0.52□□□□□ -2.33
SNORD3E-202ENST00000627253 PCYT1BQ9Y5K3 369 aaPredicted RBP0.52□□□□□ -2.33
SNORD3E-202ENST00000627253 GBF1Q92538 1859 aa0.52□□□□□ -2.33
SNORD3E-202ENST00000627253 GREB1Q4ZG55 1949 aa0.52□□□□□ -2.33
SNORD3E-202ENST00000627253 RP1P56715 2156 aa0.52□□□□□ -2.33
SNORD3E-202ENST00000627253 BAZ2BQ9UIF8 2168 aaKnown RBP0.52□□□□□ -2.33
SNORD3E-202ENST00000627253 A0A087WUU8 490 aa0.51□□□□□ -2.33
SNORD3E-202ENST00000627253 TRGV5A0A0B4J1U4 118 aa0.51□□□□□ -2.33
SNORD3E-202ENST00000627253 A0A1W2PQD3 144 aa0.51□□□□□ -2.33
SNORD3E-202ENST00000627253 PXDNLA1KZ92 1463 aa0.51□□□□□ -2.33
SNORD3E-202ENST00000627253 OR6C6A6NF89 314 aa0.51□□□□□ -2.33
SNORD3E-202ENST00000627253 ZNF860A6NHJ4 632 aa0.51□□□□□ -2.33
SNORD3E-202ENST00000627253 SIGLEC16A6NMB1 481 aa0.51□□□□□ -2.33
SNORD3E-202ENST00000627253 C21orf140B9A014 251 aa0.51□□□□□ -2.33
SNORD3E-202ENST00000627253 C9JCJ5 164 aa0.51□□□□□ -2.33
SNORD3E-202ENST00000627253 LRRN3E7EW58 273 aa0.51□□□□□ -2.33
SNORD3E-202ENST00000627253 UBE2L6O14933 153 aa0.51□□□□□ -2.33
SNORD3E-202ENST00000627253 SIPA1L1O43166 1804 aa0.51□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms