RNA–Protein interactions for RNA: ENST00000625716.2

TCF4-249, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 359 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-249ENST00000625716 CNIH1O95406 144 aa5.01□□□□□ -1.61
TCF4-249ENST00000625716 IGHG4P01861 327 aa5.01□□□□□ -1.61
TCF4-249ENST00000625716 CLEC2LP0C7M8 214 aa5.01□□□□□ -1.61
TCF4-249ENST00000625716 RRASP10301 218 aa5.01□□□□□ -1.61
TCF4-249ENST00000625716 LUMP51884 338 aaPredicted RBP5.01□□□□□ -1.61
TCF4-249ENST00000625716 ARPC4P59998 168 aa5.01□□□□□ -1.61
TCF4-249ENST00000625716 CX3CL1P78423 397 aa5.01□□□□□ -1.61
TCF4-249ENST00000625716 PSG5Q15238 335 aa5.01□□□□□ -1.61
TCF4-249ENST00000625716 RTL8BQ17RB0 113 aa5.01□□□□□ -1.61
TCF4-249ENST00000625716 ECSCRQ19T08 205 aa5.01□□□□□ -1.61
TCF4-249ENST00000625716 ZNF660Q6AZW8 331 aaPredicted RBP5.01□□□□□ -1.61
TCF4-249ENST00000625716 Q6ZS49 121 aa5.01□□□□□ -1.61
TCF4-249ENST00000625716 PDPNQ86YL7 162 aa5.01□□□□□ -1.61
TCF4-249ENST00000625716 RBMXL1Q96E39 390 aaKnown RBP5.01□□□□□ -1.61
TCF4-249ENST00000625716 S100A16Q96FQ6 103 aaKnown RBP5.01□□□□□ -1.61
TCF4-249ENST00000625716 ADTRPQ96IZ2 230 aa5.01□□□□□ -1.61
TCF4-249ENST00000625716 CABLES2Q9BTV7 478 aa5.01□□□□□ -1.61
TCF4-249ENST00000625716 TOLLIPQ9H0E2 274 aa5.01□□□□□ -1.61
TCF4-249ENST00000625716 FBXL15Q9H469 300 aa5.01□□□□□ -1.61
TCF4-249ENST00000625716 RNF167Q9H6Y7 350 aa5.01□□□□□ -1.61
TCF4-249ENST00000625716 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP5.01□□□□□ -1.611e-6■■□□□ 14.2
TCF4-249ENST00000625716 SLC35D1Q9NTN3 355 aa5.01□□□□□ -1.61
TCF4-249ENST00000625716 NECAP2Q9NVZ3 263 aa5.01□□□□□ -1.61
TCF4-249ENST00000625716 SDHAF2Q9NX18 166 aa5.01□□□□□ -1.61
TCF4-249ENST00000625716 ZMAT5Q9UDW3 170 aaKnown RBP5.01□□□□□ -1.61
TCF4-249ENST00000625716 ZNF580Q9UK33 172 aa5.01□□□□□ -1.61
TCF4-249ENST00000625716 GAB2Q9UQC2 676 aa5.01□□□□□ -1.61
TCF4-249ENST00000625716 A3GALT2U3KPV4 340 aa5.01□□□□□ -1.61
TCF4-249ENST00000625716 MGAM2Q2M2H8 2515 aa5□□□□□ -1.61
TCF4-249ENST00000625716 A0A0A6YYH2 397 aa5□□□□□ -1.61
TCF4-249ENST00000625716 IGHV7-81A0A0B4J1V7 117 aa5□□□□□ -1.61
TCF4-249ENST00000625716 A6NJ64 397 aa5□□□□□ -1.61
TCF4-249ENST00000625716 G3V318 75 aa5□□□□□ -1.61
TCF4-249ENST00000625716 J3QRK9 145 aa5□□□□□ -1.61
TCF4-249ENST00000625716 CCL24O00175 119 aa5□□□□□ -1.61
TCF4-249ENST00000625716 ATP6V0E1O15342 81 aa5□□□□□ -1.61
TCF4-249ENST00000625716 SLC22A5O76082 557 aa5□□□□□ -1.61
TCF4-249ENST00000625716 SPDEFO95238 335 aa5□□□□□ -1.61
TCF4-249ENST00000625716 PRB2P02812 416 aaPredicted RBP5□□□□□ -1.61
TCF4-249ENST00000625716 CDX1P47902 265 aaPredicted RBP5□□□□□ -1.61
TCF4-249ENST00000625716 LGALS7P47929 136 aa5□□□□□ -1.61
TCF4-249ENST00000625716 THBS3P49746 956 aa5□□□□□ -1.61
TCF4-249ENST00000625716 LSM3P62310 102 aaKnown RBP5□□□□□ -1.61
TCF4-249ENST00000625716 GNB1P62873 340 aa5□□□□□ -1.61
TCF4-249ENST00000625716 ZNF260Q3ZCT1 412 aa5□□□□□ -1.61
TCF4-249ENST00000625716 KPRPQ5T749 579 aaPredicted RBP5□□□□□ -1.61
TCF4-249ENST00000625716 CNIH2Q6PI25 160 aa5□□□□□ -1.61
TCF4-249ENST00000625716 UNQ5815/PRO19632Q6UWF5 114 aa5□□□□□ -1.61
TCF4-249ENST00000625716 C18orf65Q6ZTR6 163 aa5□□□□□ -1.61
TCF4-249ENST00000625716 PPP1R27Q86WC6 154 aa5□□□□□ -1.61
TCF4-249ENST00000625716 H1FOOQ8IZA3 346 aaPredicted RBP5□□□□□ -1.61
TCF4-249ENST00000625716 TCTEX1D1Q8N7M0 179 aa5□□□□□ -1.61
TCF4-249ENST00000625716 ZNF383Q8NA42 475 aa5□□□□□ -1.61
TCF4-249ENST00000625716 OR5M8Q8NGP6 311 aa5□□□□□ -1.61
TCF4-249ENST00000625716 OR5H6Q8NGV6 325 aa5□□□□□ -1.61
TCF4-249ENST00000625716 MRAPQ8TCY5 172 aa5□□□□□ -1.61
TCF4-249ENST00000625716 NUDCD2Q8WVJ2 157 aa5□□□□□ -1.61
TCF4-249ENST00000625716 C4orf3Q8WVX3 66 aa5□□□□□ -1.61
TCF4-249ENST00000625716 UBE2E2Q96LR5 201 aa5□□□□□ -1.61
TCF4-249ENST00000625716 DCUN1D5Q9BTE7 237 aa5□□□□□ -1.61
TCF4-249ENST00000625716 ZNF355PQ9NSJ1 428 aa5□□□□□ -1.61
TCF4-249ENST00000625716 ELF5Q9UKW6 265 aaPredicted RBP5□□□□□ -1.61
TCF4-249ENST00000625716 SPATA2Q9UM82 520 aa5□□□□□ -1.61
TCF4-249ENST00000625716 VSIG4Q9Y279 399 aa5□□□□□ -1.61
TCF4-249ENST00000625716 PRELID3BQ9Y3B1 194 aa5□□□□□ -1.61
TCF4-249ENST00000625716 IGKV1D-8A0A087WSZ0 117 aa4.99□□□□□ -1.61
TCF4-249ENST00000625716 SMIM31A0A1B0GVY4 71 aa4.99□□□□□ -1.61
TCF4-249ENST00000625716 A0A1W2PN81 502 aa4.99□□□□□ -1.61
TCF4-249ENST00000625716 FCN1O00602 326 aa4.99□□□□□ -1.61
TCF4-249ENST00000625716 SLC25A17O43808 307 aa4.99□□□□□ -1.61
TCF4-249ENST00000625716 PROP1O75360 226 aa4.99□□□□□ -1.61
TCF4-249ENST00000625716 TUSC2O75896 110 aa4.99□□□□□ -1.61
TCF4-249ENST00000625716 CA2P00918 260 aa4.99□□□□□ -1.61
TCF4-249ENST00000625716 IGKV1-16P04430 117 aa4.99□□□□□ -1.61
TCF4-249ENST00000625716 NFYAP23511 347 aaPredicted RBP4.99□□□□□ -1.61
TCF4-249ENST00000625716 PSMB8P28062 276 aa4.99□□□□□ -1.61
TCF4-249ENST00000625716 PPIFP30405 207 aaKnown RBP4.99□□□□□ -1.61
TCF4-249ENST00000625716 CHRNA7P36544 502 aa4.99□□□□□ -1.61
TCF4-249ENST00000625716 RPS19P39019 145 aaKnown RBP4.99□□□□□ -1.61
TCF4-249ENST00000625716 CBX5P45973 191 aa4.99□□□□□ -1.61
TCF4-249ENST00000625716 RAB9AP51151 201 aa4.99□□□□□ -1.61
TCF4-249ENST00000625716 LINC00205P59089 165 aa4.99□□□□□ -1.61
TCF4-249ENST00000625716 CFHR3Q02985 330 aa4.99□□□□□ -1.61
TCF4-249ENST00000625716 FXYD3Q14802 87 aa4.99□□□□□ -1.61
TCF4-249ENST00000625716 DEFB136Q30KP8 78 aa4.99□□□□□ -1.61
TCF4-249ENST00000625716 VMA21Q3ZAQ7 101 aa4.99□□□□□ -1.61
TCF4-249ENST00000625716 ACTBL2Q562R1 376 aa4.99□□□□□ -1.61
TCF4-249ENST00000625716 UBE2NLQ5JXB2 153 aa4.99□□□□□ -1.61
TCF4-249ENST00000625716 FOXB2Q5VYV0 432 aa4.99□□□□□ -1.61
TCF4-249ENST00000625716 PYHIN1Q6K0P9 492 aa4.99□□□□□ -1.61
TCF4-249ENST00000625716 ZNF562Q6V9R5 426 aa4.99□□□□□ -1.61
TCF4-249ENST00000625716 ZNF645Q8N7E2 425 aa4.99□□□□□ -1.61
TCF4-249ENST00000625716 STPG3Q8N7X2 389 aa4.99□□□□□ -1.61
TCF4-249ENST00000625716 SAMD12Q8N8I0 201 aa4.99□□□□□ -1.61
TCF4-249ENST00000625716 ZNF491Q8N8L2 437 aa4.99□□□□□ -1.61
TCF4-249ENST00000625716 RNF152Q8N8N0 203 aa4.99□□□□□ -1.61
TCF4-249ENST00000625716 MINDY2Q8NBR6 621 aa4.99□□□□□ -1.61
TCF4-249ENST00000625716 LFNGQ8NES3 379 aa4.99□□□□□ -1.61
TCF4-249ENST00000625716 BEST4Q8NFU0 473 aa4.99□□□□□ -1.61
TCF4-249ENST00000625716 OR11H1Q8NG94 326 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms