RNA–Protein interactions for RNA: ENST00000625299.1

PNKP-218, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 428 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-218ENST00000625299 OR2D2Q9H210 308 aa10.99□□□□□ -0.65
PNKP-218ENST00000625299 Q9N2K0 584 aa10.99□□□□□ -0.65
PNKP-218ENST00000625299 MGAT4AQ9UM21 535 aa10.99□□□□□ -0.65
PNKP-218ENST00000625299 TRBV6-6A0A0A6YYG2 114 aa10.98□□□□□ -0.65
PNKP-218ENST00000625299 IGKV1-6A0A0C4DH72 117 aa10.98□□□□□ -0.65
PNKP-218ENST00000625299 SOCS1O15524 211 aa10.98□□□□□ -0.65
PNKP-218ENST00000625299 OR2J3O76001 311 aa10.98□□□□□ -0.65
PNKP-218ENST00000625299 NDUFB8O95169 186 aa10.98□□□□□ -0.65
PNKP-218ENST00000625299 INSL4Q14641 139 aa10.98□□□□□ -0.65
PNKP-218ENST00000625299 PRSS8Q16651 343 aa10.98□□□□□ -0.65
PNKP-218ENST00000625299 RTL8BQ17RB0 113 aa10.98□□□□□ -0.65
PNKP-218ENST00000625299 MRGPRG-AS1Q2M3A8 158 aa10.98□□□□□ -0.65
PNKP-218ENST00000625299 C15orf32Q32M92 178 aa10.98□□□□□ -0.65
PNKP-218ENST00000625299 VMA21Q3ZAQ7 101 aa10.98□□□□□ -0.65
PNKP-218ENST00000625299 RBM48Q5RL73 367 aaKnown RBP10.98□□□□□ -0.65
PNKP-218ENST00000625299 GLT8D1Q68CQ7 371 aa10.98□□□□□ -0.65
PNKP-218ENST00000625299 ZNF57Q68EA5 555 aaPredicted RBP10.98□□□□□ -0.65
PNKP-218ENST00000625299 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.98□□□□□ -0.65
PNKP-218ENST00000625299 ZNF485Q8NCK3 441 aa10.98□□□□□ -0.65
PNKP-218ENST00000625299 C12orf4Q9NQ89 552 aa10.98□□□□□ -0.65
PNKP-218ENST00000625299 SDHAF2Q9NX18 166 aa10.98□□□□□ -0.65
PNKP-218ENST00000625299 ZNF320A2RRD8 509 aa10.97□□□□□ -0.65
PNKP-218ENST00000625299 BET1O15155 118 aa10.97□□□□□ -0.65
PNKP-218ENST00000625299 GGCTO75223 188 aaKnown RBP10.97□□□□□ -0.65
PNKP-218ENST00000625299 ATP5HO75947 161 aa10.97□□□□□ -0.65
PNKP-218ENST00000625299 IGHV3-23P01764 117 aa10.97□□□□□ -0.65
PNKP-218ENST00000625299 CD3GP09693 182 aa10.97□□□□□ -0.65
PNKP-218ENST00000625299 CBLN1P23435 193 aa10.97□□□□□ -0.65
PNKP-218ENST00000625299 TAGLNQ01995 201 aaKnown RBP10.97□□□□□ -0.65
PNKP-218ENST00000625299 DEFB135Q30KP9 77 aa10.97□□□□□ -0.65
PNKP-218ENST00000625299 TMEM177Q53S58 311 aa10.97□□□□□ -0.65
PNKP-218ENST00000625299 ZFP1Q6P2D0 407 aa10.97□□□□□ -0.65
PNKP-218ENST00000625299 NECAP1Q8NC96 275 aa10.97□□□□□ -0.65
PNKP-218ENST00000625299 RYR1P21817 5038 aa10.97□□□□□ -0.65
PNKP-218ENST00000625299 TRBV9A0A0B4J1U6 114 aa10.96□□□□□ -0.65
PNKP-218ENST00000625299 TMEM14DPA8MWL7 114 aa10.96□□□□□ -0.65
PNKP-218ENST00000625299 SPRY2O43597 315 aa10.96□□□□□ -0.65
PNKP-218ENST00000625299 ACTL6BO94805 426 aa10.96□□□□□ -0.65
PNKP-218ENST00000625299 CRYZL1O95825 349 aa10.96□□□□□ -0.65
PNKP-218ENST00000625299 SRMP19623 302 aa10.96□□□□□ -0.65
PNKP-218ENST00000625299 BMI1P35226 326 aa10.96□□□□□ -0.65
PNKP-218ENST00000625299 UBE2KP61086 200 aa10.96□□□□□ -0.65
PNKP-218ENST00000625299 TNFRSF9Q07011 255 aa10.96□□□□□ -0.65
PNKP-218ENST00000625299 TM4SF20Q53R12 229 aa10.96□□□□□ -0.65
PNKP-218ENST00000625299 C10orf55Q5SWW7 151 aa10.96□□□□□ -0.65
PNKP-218ENST00000625299 LRRTM1Q86UE6 522 aa10.96□□□□□ -0.65
PNKP-218ENST00000625299 C5orf30Q96GV9 206 aa10.96□□□□□ -0.65
PNKP-218ENST00000625299 CMSS1Q9BQ75 279 aaKnown RBP10.96□□□□□ -0.65
PNKP-218ENST00000625299 URM1Q9BTM9 101 aaKnown RBP10.96□□□□□ -0.65
PNKP-218ENST00000625299 LPAR5Q9H1C0 372 aa10.96□□□□□ -0.65
PNKP-218ENST00000625299 MLXQ9UH92 298 aa10.96□□□□□ -0.65
PNKP-218ENST00000625299 S4R3C0 116 aa10.96□□□□□ -0.65
PNKP-218ENST00000625299 TRDCB7Z8K6 153 aa10.95□□□□□ -0.66
PNKP-218ENST00000625299 LGALS9O00182 355 aa10.95□□□□□ -0.66
PNKP-218ENST00000625299 MYL12BO14950 172 aa10.95□□□□□ -0.66
PNKP-218ENST00000625299 ARL3P36405 182 aa10.95□□□□□ -0.66
PNKP-218ENST00000625299 ST3GAL4Q11206 333 aa10.95□□□□□ -0.66
PNKP-218ENST00000625299 P2RY14Q15391 338 aa10.95□□□□□ -0.66
PNKP-218ENST00000625299 ANKRD55Q3KP44 614 aa10.95□□□□□ -0.66
PNKP-218ENST00000625299 C1orf100Q5SVJ3 147 aa10.95□□□□□ -0.66
PNKP-218ENST00000625299 TTC23Q5W5X9 447 aa10.95□□□□□ -0.66
PNKP-218ENST00000625299 BTNL8Q6UX41 500 aa10.95□□□□□ -0.66
PNKP-218ENST00000625299 C19orf35Q6ZS72 473 aa10.95□□□□□ -0.66
PNKP-218ENST00000625299 TEX45Q8NA69 505 aa10.95□□□□□ -0.66
PNKP-218ENST00000625299 UXS1Q8NBZ7 420 aa10.95□□□□□ -0.66
PNKP-218ENST00000625299 GATAD1Q8WUU5 269 aa10.95□□□□□ -0.66
PNKP-218ENST00000625299 SPIN2AQ99865 258 aa10.95□□□□□ -0.66
PNKP-218ENST00000625299 SPIN2BQ9BPZ2 258 aa10.95□□□□□ -0.66
PNKP-218ENST00000625299 ZNF430Q9H8G1 570 aaPredicted RBP10.95□□□□□ -0.66
PNKP-218ENST00000625299 RBM7Q9Y580 266 aaKnown RBP10.95□□□□□ -0.66
PNKP-218ENST00000625299 TMEM213A2RRL7 107 aa10.94□□□□□ -0.66
PNKP-218ENST00000625299 EFCAB10A6NFE3 127 aa10.94□□□□□ -0.66
PNKP-218ENST00000625299 BPNT1O95861 308 aa10.94□□□□□ -0.66
PNKP-218ENST00000625299 RRASP10301 218 aa10.94□□□□□ -0.66
PNKP-218ENST00000625299 SERPINB10P48595 397 aa10.94□□□□□ -0.66
PNKP-218ENST00000625299 APOC4P55056 127 aa10.94□□□□□ -0.66
PNKP-218ENST00000625299 QRFPP83859 136 aa10.94□□□□□ -0.66
PNKP-218ENST00000625299 ACSM3Q53FZ2 586 aa10.94□□□□□ -0.66
PNKP-218ENST00000625299 FAM209BQ5JX69 171 aa10.94□□□□□ -0.66
PNKP-218ENST00000625299 LGALS9CQ6DKI2 356 aa10.94□□□□□ -0.66
PNKP-218ENST00000625299 CLEC19AQ6UXS0 136 aa10.94□□□□□ -0.66
PNKP-218ENST00000625299 CEACAM19Q7Z692 300 aa10.94□□□□□ -0.66
PNKP-218ENST00000625299 WFDC3Q8IUB2 231 aa10.94□□□□□ -0.66
PNKP-218ENST00000625299 TTC9CQ8N5M4 171 aa10.94□□□□□ -0.66
PNKP-218ENST00000625299 PHLDA1Q8WV24 401 aaPredicted RBP10.94□□□□□ -0.66
PNKP-218ENST00000625299 ARHGAP5-AS1Q96IT6 56 aa10.94□□□□□ -0.66
PNKP-218ENST00000625299 SMPD3Q9NY59 655 aaPredicted RBP10.94□□□□□ -0.66
PNKP-218ENST00000625299 FBXL7Q9UJT9 491 aa10.94□□□□□ -0.66
PNKP-218ENST00000625299 DMRT1Q9Y5R6 373 aa10.94□□□□□ -0.66
PNKP-218ENST00000625299 HMX3A6NHT5 357 aa10.93□□□□□ -0.66
PNKP-218ENST00000625299 FABP7O15540 132 aa10.93□□□□□ -0.66
PNKP-218ENST00000625299 CREBL2O60519 120 aaPredicted RBP10.93□□□□□ -0.66
PNKP-218ENST00000625299 WNT4P56705 351 aa10.93□□□□□ -0.66
PNKP-218ENST00000625299 MRPS15P82914 257 aaKnown RBP10.93□□□□□ -0.66
PNKP-218ENST00000625299 IGSF11Q5DX21 431 aa10.93□□□□□ -0.66
PNKP-218ENST00000625299 RBPMS2Q6ZRY4 209 aaKnown RBP10.93□□□□□ -0.66
PNKP-218ENST00000625299 Q6ZWC4 215 aa10.93□□□□□ -0.66
PNKP-218ENST00000625299 GPHB5Q86YW7 130 aa10.93□□□□□ -0.66
PNKP-218ENST00000625299 TMEM217Q8N7C4 229 aa10.93□□□□□ -0.66
PNKP-218ENST00000625299 OR6M1Q8NGM8 313 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms