RNA–Protein interactions for RNA: ENST00000623253.4_PAR_Y

CD99-211, Transcript of CD99 molecule (Xg blood group), humanhuman

TSL 1 (best)

Gene CD99, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD99-211ENST00000623253_PAR_Y OR56B1Q8NGI3 324 aa12.3□□□□□ -0.44
CD99-211ENST00000623253_PAR_Y ARHGAP5-AS1Q96IT6 56 aa12.3□□□□□ -0.44
CD99-211ENST00000623253_PAR_Y PHB2Q99623 299 aa12.3□□□□□ -0.44
CD99-211ENST00000623253_PAR_Y CMSS1Q9BQ75 279 aaKnown RBP12.3□□□□□ -0.44
CD99-211ENST00000623253_PAR_Y TINAGL1Q9GZM7 467 aaPredicted RBP12.3□□□□□ -0.44
CD99-211ENST00000623253_PAR_Y HIPK2Q9H2X6 1198 aa12.3□□□□□ -0.44
CD99-211ENST00000623253_PAR_Y SLC35D1Q9NTN3 355 aa12.3□□□□□ -0.44
CD99-211ENST00000623253_PAR_Y TPPPO94811 219 aa12.29□□□□□ -0.44
CD99-211ENST00000623253_PAR_Y SSBP2P81877 361 aaPredicted RBP12.29□□□□□ -0.44
CD99-211ENST00000623253_PAR_Y TBCEQ15813 527 aaPredicted RBP12.29□□□□□ -0.44
CD99-211ENST00000623253_PAR_Y C2orf76Q3KRA6 126 aa12.29□□□□□ -0.44
CD99-211ENST00000623253_PAR_Y ZNF343Q6P1L6 599 aa12.29□□□□□ -0.44
CD99-211ENST00000623253_PAR_Y ZNF367Q7RTV3 350 aa12.29□□□□□ -0.44
CD99-211ENST00000623253_PAR_Y PTX4Q96A99 478 aa12.29□□□□□ -0.44
CD99-211ENST00000623253_PAR_Y TMEM68Q96MH6 324 aa12.29□□□□□ -0.44
CD99-211ENST00000623253_PAR_Y PECRQ9BY49 303 aa12.29□□□□□ -0.44
CD99-211ENST00000623253_PAR_Y PEMTQ9UBM1 199 aa12.29□□□□□ -0.44
CD99-211ENST00000623253_PAR_Y RAB22AQ9UL26 194 aa12.29□□□□□ -0.44
CD99-211ENST00000623253_PAR_Y BLOC1S6Q9UL45 172 aa12.29□□□□□ -0.44
CD99-211ENST00000623253_PAR_Y A0A0B4J203 849 aa12.28□□□□□ -0.44
CD99-211ENST00000623253_PAR_Y DENRO43583 198 aaKnown RBP12.28□□□□□ -0.44
CD99-211ENST00000623253_PAR_Y PLAC9Q5JTB6 97 aa12.28□□□□□ -0.44
CD99-211ENST00000623253_PAR_Y IZUMO2Q6UXV1 221 aa12.28□□□□□ -0.44
CD99-211ENST00000623253_PAR_Y SNAPC3Q92966 411 aa12.28□□□□□ -0.44
CD99-211ENST00000623253_PAR_Y USMG5Q96IX5 58 aa12.28□□□□□ -0.44
CD99-211ENST00000623253_PAR_Y HARBI1Q96MB7 349 aa12.28□□□□□ -0.44
CD99-211ENST00000623253_PAR_Y NEURL2Q9BR09 285 aa12.28□□□□□ -0.44
CD99-211ENST00000623253_PAR_Y RDH8Q9NYR8 311 aa12.28□□□□□ -0.44
CD99-211ENST00000623253_PAR_Y SIGLEC8Q9NYZ4 499 aa12.28□□□□□ -0.44
CD99-211ENST00000623253_PAR_Y TMEM272A0A1B0GTI8 110 aa12.27□□□□□ -0.45
CD99-211ENST00000623253_PAR_Y MSGN1A6NI15 193 aa12.27□□□□□ -0.45
CD99-211ENST00000623253_PAR_Y TRDCB7Z8K6 153 aa12.27□□□□□ -0.45
CD99-211ENST00000623253_PAR_Y PDCD5O14737 125 aa12.27□□□□□ -0.45
CD99-211ENST00000623253_PAR_Y OR2A4O95047 310 aa12.27□□□□□ -0.45
CD99-211ENST00000623253_PAR_Y IGLV2-23P01705 113 aa12.27□□□□□ -0.45
CD99-211ENST00000623253_PAR_Y MRPS15P82914 257 aaKnown RBP12.27□□□□□ -0.45
CD99-211ENST00000623253_PAR_Y HES5Q5TA89 166 aa12.27□□□□□ -0.45
CD99-211ENST00000623253_PAR_Y DEFB125Q8N687 156 aa12.27□□□□□ -0.45
CD99-211ENST00000623253_PAR_Y CNBD2Q96M20 576 aa12.27□□□□□ -0.45
CD99-211ENST00000623253_PAR_Y SLC2A8Q9NY64 477 aa12.27□□□□□ -0.45
CD99-211ENST00000623253_PAR_Y TRAV1-2A0A0B4J238 106 aa12.26□□□□□ -0.45
CD99-211ENST00000623253_PAR_Y IGKV1-6A0A0C4DH72 117 aa12.26□□□□□ -0.45
CD99-211ENST00000623253_PAR_Y ERICH4A6NGS2 130 aa12.26□□□□□ -0.45
CD99-211ENST00000623253_PAR_Y SHOXO15266 292 aa12.26□□□□□ -0.45
CD99-211ENST00000623253_PAR_Y MPPED1O15442 326 aa12.26□□□□□ -0.45
CD99-211ENST00000623253_PAR_Y CRYGBP07316 175 aa12.26□□□□□ -0.45
CD99-211ENST00000623253_PAR_Y CD3GP09693 182 aa12.26□□□□□ -0.45
CD99-211ENST00000623253_PAR_Y MYL9P24844 172 aa12.26□□□□□ -0.45
CD99-211ENST00000623253_PAR_Y SERPINB10P48595 397 aa12.26□□□□□ -0.45
CD99-211ENST00000623253_PAR_Y CBX3Q13185 183 aa12.26□□□□□ -0.45
CD99-211ENST00000623253_PAR_Y SSX1Q16384 188 aa12.26□□□□□ -0.45
CD99-211ENST00000623253_PAR_Y CD300EQ496F6 205 aaPredicted RBP12.26□□□□□ -0.45
CD99-211ENST00000623253_PAR_Y LINC00322Q6ZN03 302 aaPredicted RBP12.26□□□□□ -0.45
CD99-211ENST00000623253_PAR_Y OR4A4PQ8NGN8 299 aa12.26□□□□□ -0.45
CD99-211ENST00000623253_PAR_Y DYNLRB2Q8TF09 96 aa12.26□□□□□ -0.45
CD99-211ENST00000623253_PAR_Y RAB3CQ96E17 227 aa12.26□□□□□ -0.45
CD99-211ENST00000623253_PAR_Y RBMXL2O75526 392 aaKnown RBP12.25□□□□□ -0.45
CD99-211ENST00000623253_PAR_Y BRI3O95415 125 aa12.25□□□□□ -0.45
CD99-211ENST00000623253_PAR_Y CD7P09564 240 aa12.25□□□□□ -0.45
CD99-211ENST00000623253_PAR_Y MECP2P51608 486 aaKnown RBP12.25□□□□□ -0.45
CD99-211ENST00000623253_PAR_Y GUCA2BQ16661 112 aa12.25□□□□□ -0.45
CD99-211ENST00000623253_PAR_Y ZNF436-AS1Q8NC38 126 aaPredicted RBP12.25□□□□□ -0.45
CD99-211ENST00000623253_PAR_Y OR2K2Q8NGT1 345 aa12.25□□□□□ -0.45
CD99-211ENST00000623253_PAR_Y OR2D2Q9H210 308 aa12.25□□□□□ -0.45
CD99-211ENST00000623253_PAR_Y NDUFB11Q9NX14 153 aa12.25□□□□□ -0.45
CD99-211ENST00000623253_PAR_Y TNCP24821 2201 aa12.25□□□□□ -0.45
CD99-211ENST00000623253_PAR_Y RBMY1BA6NDE4 496 aaKnown RBP12.24□□□□□ -0.45
CD99-211ENST00000623253_PAR_Y RBMY1EA6NEQ0 496 aaKnown RBP12.24□□□□□ -0.45
CD99-211ENST00000623253_PAR_Y IFITM5A6NNB3 132 aa12.24□□□□□ -0.45
CD99-211ENST00000623253_PAR_Y SRRM4A7MD48 611 aaKnown RBP12.24□□□□□ -0.45
CD99-211ENST00000623253_PAR_Y BET1O15155 118 aa12.24□□□□□ -0.45
CD99-211ENST00000623253_PAR_Y FABP7O15540 132 aa12.24□□□□□ -0.45
CD99-211ENST00000623253_PAR_Y AIREO43918 545 aa12.24□□□□□ -0.45
CD99-211ENST00000623253_PAR_Y PRH1P02810 166 aa12.24□□□□□ -0.45
CD99-211ENST00000623253_PAR_Y OR9G9P0C7N8 305 aa12.24□□□□□ -0.45
CD99-211ENST00000623253_PAR_Y RBMY1DP0C7P1 496 aaKnown RBP12.24□□□□□ -0.45
CD99-211ENST00000623253_PAR_Y GADD45AP24522 165 aa12.24□□□□□ -0.45
CD99-211ENST00000623253_PAR_Y RHOGP84095 191 aa12.24□□□□□ -0.45
CD99-211ENST00000623253_PAR_Y ATP5G2Q06055 141 aa12.24□□□□□ -0.45
CD99-211ENST00000623253_PAR_Y PLA2G7Q13093 441 aa12.24□□□□□ -0.45
CD99-211ENST00000623253_PAR_Y TNXAQ16473 311 aa12.24□□□□□ -0.45
CD99-211ENST00000623253_PAR_Y ADAD2Q8NCV1 583 aaKnown RBP12.24□□□□□ -0.45
CD99-211ENST00000623253_PAR_Y ACOT12Q8WYK0 555 aa12.24□□□□□ -0.45
CD99-211ENST00000623253_PAR_Y WFDC10AQ9H1F0 79 aa12.24□□□□□ -0.45
CD99-211ENST00000623253_PAR_Y SRD5A3Q9H8P0 318 aa12.24□□□□□ -0.45
CD99-211ENST00000623253_PAR_Y SDHAF2Q9NX18 166 aa12.24□□□□□ -0.45
CD99-211ENST00000623253_PAR_Y RAB26Q9ULW5 256 aa12.24□□□□□ -0.45
CD99-211ENST00000623253_PAR_Y KCNK7Q9Y2U2 307 aa12.24□□□□□ -0.45
CD99-211ENST00000623253_PAR_Y TRDV1A0A1B0GX56 115 aa12.23□□□□□ -0.45
CD99-211ENST00000623253_PAR_Y ZNF785A8K8V0 405 aa12.23□□□□□ -0.45
CD99-211ENST00000623253_PAR_Y OR11H12B2RN74 326 aa12.23□□□□□ -0.45
CD99-211ENST00000623253_PAR_Y BMPR1BO00238 502 aa12.23□□□□□ -0.45
CD99-211ENST00000623253_PAR_Y DIRAS3O95661 229 aa12.23□□□□□ -0.45
CD99-211ENST00000623253_PAR_Y FCGR3AP08637 254 aa12.23□□□□□ -0.45
CD99-211ENST00000623253_PAR_Y RAB6AP20340 208 aa12.23□□□□□ -0.45
CD99-211ENST00000623253_PAR_Y GALP22466 123 aa12.23□□□□□ -0.45
CD99-211ENST00000623253_PAR_Y OR10A3P58181 314 aa12.23□□□□□ -0.45
CD99-211ENST00000623253_PAR_Y EXOSC2Q13868 293 aaKnown RBP12.23□□□□□ -0.45
CD99-211ENST00000623253_PAR_Y RTL8BQ17RB0 113 aa12.23□□□□□ -0.45
CD99-211ENST00000623253_PAR_Y LAX1Q8IWV1 398 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms