RNA–Protein interactions for RNA: ENST00000622629.4

MSH6-215, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 4,324 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-215ENST00000622629 HES4Q9HCC6 221 aa10.87□□□□□ -0.67
MSH6-215ENST00000622629 CD5P06127 495 aa10.87□□□□□ -0.67
MSH6-215ENST00000622629 IGHV1-2P23083 117 aa10.87□□□□□ -0.67
MSH6-215ENST00000622629 MOB3BQ86TA1 216 aa10.87□□□□□ -0.67
MSH6-215ENST00000622629 LRTM2Q8N967 370 aa10.87□□□□□ -0.67
MSH6-215ENST00000622629 LIME1Q9H400 295 aa10.87□□□□□ -0.67
MSH6-215ENST00000622629 NAT8BQ9UHF3 227 aa10.87□□□□□ -0.67
MSH6-215ENST00000622629 C17orf98A8MV24 154 aa10.87□□□□□ -0.67
MSH6-215ENST00000622629 ATXN7O15265 892 aaPredicted RBP10.87□□□□□ -0.67
MSH6-215ENST00000622629 HPRT1P00492 218 aa10.87□□□□□ -0.67
MSH6-215ENST00000622629 CECR9P0C854 216 aa10.87□□□□□ -0.67
MSH6-215ENST00000622629 WNT5AP41221 380 aa10.87□□□□□ -0.67
MSH6-215ENST00000622629 FAM3BP58499 235 aaPredicted RBP10.87□□□□□ -0.67
MSH6-215ENST00000622629 P2RY6Q15077 328 aa10.87□□□□□ -0.67
MSH6-215ENST00000622629 TMEM42Q69YG0 159 aa10.87□□□□□ -0.67
MSH6-215ENST00000622629 CYB5R2Q6BCY4 276 aa10.87□□□□□ -0.67
MSH6-215ENST00000622629 ABHD12Q8N2K0 398 aa10.87□□□□□ -0.67
MSH6-215ENST00000622629 WDR61Q9GZS3 305 aaKnown RBP10.87□□□□□ -0.67
MSH6-215ENST00000622629 A0A0C4DFX4 3053 aa10.87□□□□□ -0.67
MSH6-215ENST00000622629 K7N7A8 449 aa10.86□□□□□ -0.67
MSH6-215ENST00000622629 MIC13Q5XKP0 118 aa10.86□□□□□ -0.67
MSH6-215ENST00000622629 OR10G8Q8NGN5 311 aa10.86□□□□□ -0.67
MSH6-215ENST00000622629 WDYHV1Q96HA8 205 aa10.86□□□□□ -0.67
MSH6-215ENST00000622629 INTS1Q8N201 2190 aaKnown RBP10.86□□□□□ -0.67
MSH6-215ENST00000622629 CEACAM18A8MTB9 384 aa10.86□□□□□ -0.67
MSH6-215ENST00000622629 KIAA1324LA8MWY0 1029 aaPredicted RBP10.86□□□□□ -0.67
MSH6-215ENST00000622629 J3QR06 171 aa10.86□□□□□ -0.67
MSH6-215ENST00000622629 FCN1O00602 326 aa10.86□□□□□ -0.67
MSH6-215ENST00000622629 GFRA3O60609 400 aa10.86□□□□□ -0.67
MSH6-215ENST00000622629 RPS2P15880 293 aaKnown RBP10.86□□□□□ -0.67
MSH6-215ENST00000622629 GNG4P50150 75 aa10.86□□□□□ -0.67
MSH6-215ENST00000622629 OR5B3Q8NH48 314 aa10.86□□□□□ -0.67
MSH6-215ENST00000622629 PCGF1Q9BSM1 259 aa10.86□□□□□ -0.67
MSH6-215ENST00000622629 SLC45A2Q9UMX9 530 aa10.86□□□□□ -0.67
MSH6-215ENST00000622629 ZNF835Q9Y2P0 537 aa10.86□□□□□ -0.67
MSH6-215ENST00000622629 APELAP0DMC3 54 aa10.86□□□□□ -0.67
MSH6-215ENST00000622629 TNFSF10P50591 281 aa10.86□□□□□ -0.67
MSH6-215ENST00000622629 KRTDAPP60985 99 aa10.86□□□□□ -0.67
MSH6-215ENST00000622629 ZNF506Q5JVG8 444 aa10.86□□□□□ -0.67
MSH6-215ENST00000622629 FAM201AQ5SY85 155 aa10.86□□□□□ -0.67
MSH6-215ENST00000622629 DBX2Q6ZNG2 339 aa10.86□□□□□ -0.67
MSH6-215ENST00000622629 PXMP4Q9Y6I8 212 aa10.86□□□□□ -0.67
MSH6-215ENST00000622629 PLCE1Q9P212 2302 aa10.86□□□□□ -0.67
MSH6-215ENST00000622629 IGKV3D-15A0A087WSY6 115 aa10.85□□□□□ -0.67
MSH6-215ENST00000622629 C9JQL5 133 aa10.85□□□□□ -0.67
MSH6-215ENST00000622629 FAM90A26D6RGX4 464 aa10.85□□□□□ -0.67
MSH6-215ENST00000622629 H0Y8G0 127 aa10.85□□□□□ -0.67
MSH6-215ENST00000622629 SIGLECL1Q8N7X8 197 aa10.85□□□□□ -0.67
MSH6-215ENST00000622629 SGMS2Q8NHU3 365 aa10.85□□□□□ -0.67
MSH6-215ENST00000622629 MISP3Q96FF7 219 aa10.85□□□□□ -0.67
MSH6-215ENST00000622629 ADTRPQ96IZ2 230 aa10.85□□□□□ -0.67
MSH6-215ENST00000622629 CD55P08174 381 aa10.85□□□□□ -0.67
MSH6-215ENST00000622629 ZNF883P0CG24 379 aa10.85□□□□□ -0.67
MSH6-215ENST00000622629 TEPPQ6URK8 271 aa10.85□□□□□ -0.67
MSH6-215ENST00000622629 OR13A1Q8NGR1 328 aa10.85□□□□□ -0.67
MSH6-215ENST00000622629 HARBI1Q96MB7 349 aa10.85□□□□□ -0.67
MSH6-215ENST00000622629 MS4A10Q96PG2 267 aa10.85□□□□□ -0.67
MSH6-215ENST00000622629 GAL3ST2Q9H3Q3 398 aa10.85□□□□□ -0.67
MSH6-215ENST00000622629 SAP30LQ9HAJ7 183 aa10.85□□□□□ -0.67
MSH6-215ENST00000622629 ZNF355PQ9NSJ1 428 aa10.85□□□□□ -0.67
MSH6-215ENST00000622629 LOC102723971A0A1B0GUV8 181 aa10.85□□□□□ -0.67
MSH6-215ENST00000622629 PTBP3O95758 552 aaKnown RBP10.85□□□□□ -0.67
MSH6-215ENST00000622629 KIR2DS2P43631 304 aa10.85□□□□□ -0.67
MSH6-215ENST00000622629 FOXL2NBQ6ZUU3 175 aa10.85□□□□□ -0.67
MSH6-215ENST00000622629 TXN2Q99757 166 aa10.85□□□□□ -0.67
MSH6-215ENST00000622629 ELOA3CA0A087WX78 387 aaPredicted RBP10.85□□□□□ -0.67
MSH6-215ENST00000622629 AHRRA9YTQ3 701 aa10.85□□□□□ -0.67
MSH6-215ENST00000622629 RPL31P62899 125 aaKnown RBP10.85□□□□□ -0.67
MSH6-215ENST00000622629 VMA21Q3ZAQ7 101 aa10.85□□□□□ -0.67
MSH6-215ENST00000622629 TOMM20LQ6UXN7 152 aa10.85□□□□□ -0.67
MSH6-215ENST00000622629 PITPNC1Q9UKF7 332 aa10.85□□□□□ -0.67
MSH6-215ENST00000622629 CACNA1BQ00975 2339 aa10.84□□□□□ -0.67
MSH6-215ENST00000622629 RAB29O14966 203 aa10.84□□□□□ -0.67
MSH6-215ENST00000622629 SCGB2A1O75556 95 aa10.84□□□□□ -0.67
MSH6-215ENST00000622629 NAPSAO96009 420 aa10.84□□□□□ -0.67
MSH6-215ENST00000622629 ORM2P19652 201 aa10.84□□□□□ -0.67
MSH6-215ENST00000622629 CNN1P51911 297 aaKnown RBP10.84□□□□□ -0.67
MSH6-215ENST00000622629 LGALS4P56470 323 aa10.84□□□□□ -0.67
MSH6-215ENST00000622629 SPCS3P61009 180 aa10.84□□□□□ -0.67
MSH6-215ENST00000622629 MST1LQ2TV78 715 aa10.84□□□□□ -0.67
MSH6-215ENST00000622629 SLC24A4Q8NFF2 622 aa10.84□□□□□ -0.67
MSH6-215ENST00000622629 TMEM171Q8WVE6 324 aa10.84□□□□□ -0.67
MSH6-215ENST00000622629 ANAPC16Q96DE5 110 aa10.84□□□□□ -0.67
MSH6-215ENST00000622629 PARLQ9H300 379 aa10.84□□□□□ -0.67
MSH6-215ENST00000622629 BARX1Q9HBU1 254 aaPredicted RBP10.84□□□□□ -0.67
MSH6-215ENST00000622629 NPVFQ9HCQ7 196 aa10.84□□□□□ -0.67
MSH6-215ENST00000622629 GTF3C1Q12789 2109 aa10.84□□□□□ -0.67
MSH6-215ENST00000622629 TRGC1P0CF51 173 aa10.84□□□□□ -0.67
MSH6-215ENST00000622629 PMCHP20382 165 aa10.84□□□□□ -0.67
MSH6-215ENST00000622629 COX7A1P24310 79 aa10.84□□□□□ -0.67
MSH6-215ENST00000622629 UBE2L3P68036 154 aaKnown RBP10.84□□□□□ -0.67
MSH6-215ENST00000622629 RPL39P5Q59GN2 51 aa10.84□□□□□ -0.67
MSH6-215ENST00000622629 ZNF525Q8N782 197 aa10.84□□□□□ -0.67
MSH6-215ENST00000622629 BLNKQ8WV28 456 aa10.84□□□□□ -0.67
MSH6-215ENST00000622629 CALYQ9NYX4 217 aa10.84□□□□□ -0.67
MSH6-215ENST00000622629 CISD1Q9NZ45 108 aaKnown RBP10.84□□□□□ -0.67
MSH6-215ENST00000622629 CREBBPQ92793 2442 aa10.84□□□□□ -0.67
MSH6-215ENST00000622629 BPTFQ12830 3046 aa10.84□□□□□ -0.67
MSH6-215ENST00000622629 COLCA2A8K830 154 aa10.84□□□□□ -0.67
MSH6-215ENST00000622629 NDUFS8O00217 210 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms